RNA–Protein interactions for RNA: ENST00000357450.8

SMC1B-201, Transcript of structural maintenance of chromosomes 1B, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMC1B, Length 4,201 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1B-201ENST00000357450 CA14Q9ULX7 337 aa4.16□□□□□ -1.74
SMC1B-201ENST00000357450 PCDHGC3Q9UN70 934 aa4.16□□□□□ -1.74
SMC1B-201ENST00000357450 DIS3Q9Y2L1 958 aaKnown RBP4.16□□□□□ -1.74
SMC1B-201ENST00000357450 RWDD3Q9Y3V2 267 aa4.16□□□□□ -1.74
SMC1B-201ENST00000357450 TRPV2Q9Y5S1 764 aa4.16□□□□□ -1.74
SMC1B-201ENST00000357450 FASNP49327 2511 aaKnown RBP4.16□□□□□ -1.74
SMC1B-201ENST00000357450 TRIM43BA6NCK2 446 aa4.16□□□□□ -1.74
SMC1B-201ENST00000357450 PRR23AA6NEV1 266 aa4.16□□□□□ -1.74
SMC1B-201ENST00000357450 FAM47DPA6NHR8 397 aa4.16□□□□□ -1.74
SMC1B-201ENST00000357450 K7ERI5 159 aa4.16□□□□□ -1.74
SMC1B-201ENST00000357450 MAGEB2O15479 319 aa4.16□□□□□ -1.74
SMC1B-201ENST00000357450 XPOTO43592 962 aaKnown RBP4.16□□□□□ -1.74
SMC1B-201ENST00000357450 KRT2P35908 639 aa4.16□□□□□ -1.74
SMC1B-201ENST00000357450 ME1P48163 572 aa4.16□□□□□ -1.74
SMC1B-201ENST00000357450 MAPK6Q16659 721 aa4.16□□□□□ -1.74
SMC1B-201ENST00000357450 TCEAL5Q5H9L2 206 aa4.16□□□□□ -1.74
SMC1B-201ENST00000357450 GLRA4Q5JXX5 417 aa4.16□□□□□ -1.74
SMC1B-201ENST00000357450 HAUS3Q68CZ6 603 aa4.16□□□□□ -1.74
SMC1B-201ENST00000357450 STXBP4Q6ZWJ1 553 aa4.16□□□□□ -1.74
SMC1B-201ENST00000357450 MYCT1Q8N699 235 aa4.16□□□□□ -1.74
SMC1B-201ENST00000357450 TBCKQ8TEA7 893 aa4.16□□□□□ -1.74
SMC1B-201ENST00000357450 PIGOQ8TEQ8 1089 aa4.16□□□□□ -1.74
SMC1B-201ENST00000357450 TRIM43Q96BQ3 446 aaPredicted RBP4.16□□□□□ -1.74
SMC1B-201ENST00000357450 JMJD4Q9H9V9 463 aa4.16□□□□□ -1.74
SMC1B-201ENST00000357450 EPB41L4AQ9HCS5 686 aaPredicted RBP4.16□□□□□ -1.74
SMC1B-201ENST00000357450 PAK6Q9NQU5 681 aaPredicted RBP4.16□□□□□ -1.74
SMC1B-201ENST00000357450 TBC1D22BQ9NU19 505 aa4.16□□□□□ -1.74
SMC1B-201ENST00000357450 SEPT11Q9NVA2 429 aaKnown RBP4.16□□□□□ -1.74
SMC1B-201ENST00000357450 MAP3K20Q9NYL2 800 aaKnown RBP4.16□□□□□ -1.74
SMC1B-201ENST00000357450 NRBP1Q9UHY1 535 aa4.16□□□□□ -1.74
SMC1B-201ENST00000357450 CD207Q9UJ71 328 aa4.16□□□□□ -1.74
SMC1B-201ENST00000357450 DNM3Q9UQ16 869 aa4.16□□□□□ -1.74
SMC1B-201ENST00000357450 HNRNPDLO14979 420 aaKnown RBP4.16□□□□□ -1.74
SMC1B-201ENST00000357450 LAMTOR5O43504 91 aa4.16□□□□□ -1.74
SMC1B-201ENST00000357450 DCXO43602 365 aa4.16□□□□□ -1.74
SMC1B-201ENST00000357450 PRPF6O94906 941 aaKnown RBP4.16□□□□□ -1.74
SMC1B-201ENST00000357450 KIF4AO95239 1232 aa4.16□□□□□ -1.74
SMC1B-201ENST00000357450 SNAI1O95863 264 aaPredicted RBP4.16□□□□□ -1.74
SMC1B-201ENST00000357450 ADH1AP07327 375 aa4.16□□□□□ -1.74
SMC1B-201ENST00000357450 UBA1P22314 1058 aaKnown RBP4.16□□□□□ -1.74
SMC1B-201ENST00000357450 CTGFP29279 349 aa4.16□□□□□ -1.74
SMC1B-201ENST00000357450 DEFB103AP81534 67 aa4.16□□□□□ -1.74
SMC1B-201ENST00000357450 MGAT5BQ3V5L5 792 aa4.16□□□□□ -1.74
SMC1B-201ENST00000357450 EARS2Q5JPH6 523 aaKnown RBP4.16□□□□□ -1.74
SMC1B-201ENST00000357450 TMEM240Q5SV17 173 aa4.16□□□□□ -1.74
SMC1B-201ENST00000357450 TATDN1Q6P1N9 297 aa4.16□□□□□ -1.74
SMC1B-201ENST00000357450 ING5Q8WYH8 240 aa4.16□□□□□ -1.74
SMC1B-201ENST00000357450 EXOC4Q96A65 974 aa4.16□□□□□ -1.74
SMC1B-201ENST00000357450 GMCL1Q96IK5 515 aa4.16□□□□□ -1.74
SMC1B-201ENST00000357450 SYNGAP1Q96PV0 1343 aa4.16□□□□□ -1.74
SMC1B-201ENST00000357450 DSCC1Q9BVC3 393 aa4.16□□□□□ -1.74
SMC1B-201ENST00000357450 NSUN3Q9H649 340 aaKnown RBP4.16□□□□□ -1.74
SMC1B-201ENST00000357450 LRRC4CQ9HCJ2 640 aa4.16□□□□□ -1.74
SMC1B-201ENST00000357450 TBC1D7Q9P0N9 293 aa4.16□□□□□ -1.74
SMC1B-201ENST00000357450 LRWD1Q9UFC0 647 aa4.16□□□□□ -1.74
SMC1B-201ENST00000357450 ZNF214Q9UL59 606 aaPredicted RBP4.16□□□□□ -1.74
SMC1B-201ENST00000357450 BARX2Q9UMQ3 279 aaPredicted RBP4.16□□□□□ -1.74
SMC1B-201ENST00000357450 FHOD1Q9Y613 1164 aa4.16□□□□□ -1.74
SMC1B-201ENST00000357450 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.16□□□□□ -1.74
SMC1B-201ENST00000357450 CREBBPQ92793 2442 aa4.15□□□□□ -1.74
SMC1B-201ENST00000357450 ANKRD36A6QL64 1941 aa4.15□□□□□ -1.74
SMC1B-201ENST00000357450 CASTOR2A6NHX0 329 aa4.15□□□□□ -1.74
SMC1B-201ENST00000357450 STX6O43752 255 aa4.15□□□□□ -1.74
SMC1B-201ENST00000357450 ALDH1A3P47895 512 aa4.15□□□□□ -1.74
SMC1B-201ENST00000357450 ANAPC15P60006 121 aa4.15□□□□□ -1.74
SMC1B-201ENST00000357450 SKOR1P84550 965 aa4.15□□□□□ -1.74
SMC1B-201ENST00000357450 TFAMQ00059 246 aaKnown RBP4.15□□□□□ -1.74
SMC1B-201ENST00000357450 FAAP100Q0VG06 881 aa4.15□□□□□ -1.74
SMC1B-201ENST00000357450 FAM171A1Q5VUB5 890 aa4.15□□□□□ -1.74
SMC1B-201ENST00000357450 GDF6Q6KF10 455 aaPredicted RBP4.15□□□□□ -1.74
SMC1B-201ENST00000357450 MSL3Q8N5Y2 521 aaKnown RBP4.15□□□□□ -1.74
SMC1B-201ENST00000357450 LPPQ93052 612 aa4.15□□□□□ -1.74
SMC1B-201ENST00000357450 ZBED3Q96IU2 234 aaPredicted RBP4.15□□□□□ -1.74
SMC1B-201ENST00000357450 KIF9Q9HAQ2 790 aa4.15□□□□□ -1.74
SMC1B-201ENST00000357450 KCNH7Q9NS40 1196 aa4.15□□□□□ -1.74
SMC1B-201ENST00000357450 PADI3Q9ULW8 664 aa4.15□□□□□ -1.74
SMC1B-201ENST00000357450 PCDHB9Q9Y5E1 797 aa4.15□□□□□ -1.74
SMC1B-201ENST00000357450 PCDHA11Q9Y5I1 949 aa4.15□□□□□ -1.74
SMC1B-201ENST00000357450 CSMD1Q96PZ7 3565 aa4.15□□□□□ -1.74
SMC1B-201ENST00000357450 GLUD1P00367 558 aa4.15□□□□□ -1.75
SMC1B-201ENST00000357450 CKMP06732 381 aa4.15□□□□□ -1.75
SMC1B-201ENST00000357450 IQCF3P0C7M6 154 aa4.15□□□□□ -1.75
SMC1B-201ENST00000357450 TGFB3P10600 412 aa4.15□□□□□ -1.75
SMC1B-201ENST00000357450 FGFR1P11362 822 aa4.15□□□□□ -1.75
SMC1B-201ENST00000357450 SKIP12755 728 aa4.15□□□□□ -1.75
SMC1B-201ENST00000357450 SLC8A3P57103 927 aa4.15□□□□□ -1.75
SMC1B-201ENST00000357450 MRPS6P82932 125 aaKnown RBP4.15□□□□□ -1.75
SMC1B-201ENST00000357450 DMP1Q13316 513 aaPredicted RBP4.15□□□□□ -1.75
SMC1B-201ENST00000357450 SYCP1Q15431 976 aa4.15□□□□□ -1.75
SMC1B-201ENST00000357450 ZNF598Q86UK7 904 aaKnown RBP4.15□□□□□ -1.75
SMC1B-201ENST00000357450 BLIDQ8IZY5 108 aa4.15□□□□□ -1.75
SMC1B-201ENST00000357450 C4orf32Q8N8J7 132 aa4.15□□□□□ -1.75
SMC1B-201ENST00000357450 TCP11Q8WWU5 503 aa4.15□□□□□ -1.75
SMC1B-201ENST00000357450 ZBTB10Q96DT7 871 aa4.15□□□□□ -1.75
SMC1B-201ENST00000357450 ZNF512Q96ME7 567 aaPredicted RBP4.15□□□□□ -1.75
SMC1B-201ENST00000357450 FTHL17Q9BXU8 183 aa4.15□□□□□ -1.75
SMC1B-201ENST00000357450 MRPL9Q9BYD2 267 aaKnown RBP4.15□□□□□ -1.75
SMC1B-201ENST00000357450 TM6SF1Q9BZW5 370 aa4.15□□□□□ -1.75
SMC1B-201ENST00000357450 IL21Q9HBE4 155 aa4.15□□□□□ -1.75
SMC1B-201ENST00000357450 ST3GAL5Q9UNP4 418 aa4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms