RNA–Protein interactions for RNA: ENST00000334690.10

TRAPPC11-201, Transcript of trafficking protein particle complex 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-201ENST00000334690 KIAA1755Q5JYT7 1200 aa18.2■□□□□ 0.5
TRAPPC11-201ENST00000334690 REXO1L1PQ8IX06 675 aa18.2■□□□□ 0.5
TRAPPC11-201ENST00000334690 Q3C1V9 767 aa18.19■□□□□ 0.5
TRAPPC11-201ENST00000334690 ATP11CQ8NB49 1132 aa18.19■□□□□ 0.5
TRAPPC11-201ENST00000334690 GJD4Q96KN9 370 aaPredicted RBP18.19■□□□□ 0.5
TRAPPC11-201ENST00000334690 FAM49AQ9H0Q0 323 aaPredicted RBP18.19■□□□□ 0.5
TRAPPC11-201ENST00000334690 SENP1Q9P0U3 644 aa18.19■□□□□ 0.5
TRAPPC11-201ENST00000334690 SLC9A2Q9UBY0 812 aa18.19■□□□□ 0.5
TRAPPC11-201ENST00000334690 TRIM10Q9UDY6 481 aa18.19■□□□□ 0.5
TRAPPC11-201ENST00000334690 ANGPTL2Q9UKU9 493 aa18.19■□□□□ 0.5
TRAPPC11-201ENST00000334690 A0A0G2JND7 137 aa18.19■□□□□ 0.5
TRAPPC11-201ENST00000334690 NPHP3-ACAD11A0A0J9YXS1 232 aa18.19■□□□□ 0.5
TRAPPC11-201ENST00000334690 KRT14P02533 472 aa18.19■□□□□ 0.5
TRAPPC11-201ENST00000334690 CYP2C19P33261 490 aa18.19■□□□□ 0.5
TRAPPC11-201ENST00000334690 GPS1Q13098 491 aa18.19■□□□□ 0.5
TRAPPC11-201ENST00000334690 ATL2Q8NHH9 583 aa18.19■□□□□ 0.5
TRAPPC11-201ENST00000334690 RNF139Q8WU17 664 aa18.19■□□□□ 0.5
TRAPPC11-201ENST00000334690 HVCN1Q96D96 273 aa18.19■□□□□ 0.5
TRAPPC11-201ENST00000334690 NBPF3Q9H094 633 aa18.19■□□□□ 0.5
TRAPPC11-201ENST00000334690 JMJD4Q9H9V9 463 aa18.19■□□□□ 0.5
TRAPPC11-201ENST00000334690 PARVAQ9NVD7 372 aa18.19■□□□□ 0.5
TRAPPC11-201ENST00000334690 CYP26A1O43174 497 aa18.19■□□□□ 0.5
TRAPPC11-201ENST00000334690 GRAMD1AQ96CP6 724 aa18.19■□□□□ 0.5
TRAPPC11-201ENST00000334690 PPP1R16BQ96T49 567 aa18.19■□□□□ 0.5
TRAPPC11-201ENST00000334690 SERPINI1Q99574 410 aa18.19■□□□□ 0.5
TRAPPC11-201ENST00000334690 HDLBPQ00341 1268 aaKnown RBP18.18■□□□□ 0.5
TRAPPC11-201ENST00000334690 ITPK1Q13572 414 aa18.18■□□□□ 0.5
TRAPPC11-201ENST00000334690 SYDE1Q6ZW31 735 aaPredicted RBP18.18■□□□□ 0.5
TRAPPC11-201ENST00000334690 CLEC10AQ8IUN9 316 aa18.18■□□□□ 0.5
TRAPPC11-201ENST00000334690 HEY1Q9Y5J3 304 aa18.18■□□□□ 0.5
TRAPPC11-201ENST00000334690 TYW5A2RUC4 315 aaKnown RBP18.18■□□□□ 0.5
TRAPPC11-201ENST00000334690 LPXNO60711 386 aa18.18■□□□□ 0.5
TRAPPC11-201ENST00000334690 CDC42EP5Q6NZY7 148 aa18.18■□□□□ 0.5
TRAPPC11-201ENST00000334690 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP18.18■□□□□ 0.5
TRAPPC11-201ENST00000334690 HSPBP1Q9NZL4 362 aa18.18■□□□□ 0.5
TRAPPC11-201ENST00000334690 PRR12Q9ULL5 1215 aa18.18■□□□□ 0.5
TRAPPC11-201ENST00000334690 LMNAP02545 664 aaKnown RBP18.18■□□□□ 0.5
TRAPPC11-201ENST00000334690 IZUMO3Q5VZ72 239 aa18.18■□□□□ 0.5
TRAPPC11-201ENST00000334690 ANKS1AQ92625 1134 aa18.18■□□□□ 0.5
TRAPPC11-201ENST00000334690 PPWD1Q96BP3 646 aaKnown RBP18.18■□□□□ 0.5
TRAPPC11-201ENST00000334690 SLC10A4Q96EP9 437 aa18.18■□□□□ 0.5
TRAPPC11-201ENST00000334690 LRRC37BQ96QE4 947 aa18.18■□□□□ 0.5
TRAPPC11-201ENST00000334690 SCOCQ9UIL1 159 aa18.18■□□□□ 0.5
TRAPPC11-201ENST00000334690 STAT4Q14765 748 aa18.18■□□□□ 0.5
TRAPPC11-201ENST00000334690 TAF1BQ53T94 588 aaPredicted RBP18.18■□□□□ 0.5
TRAPPC11-201ENST00000334690 APOBEC3FQ8IUX4 373 aaKnown RBP18.18■□□□□ 0.5
TRAPPC11-201ENST00000334690 PPARGC1AQ9UBK2 798 aaKnown RBP18.18■□□□□ 0.5
TRAPPC11-201ENST00000334690 SPATA31A1Q5TZJ5 1347 aa18.17■□□□□ 0.5
TRAPPC11-201ENST00000334690 EIF3DO15371 548 aaKnown RBP eCLIP18.17■□□□□ 0.5
TRAPPC11-201ENST00000334690 BCAR1P56945 870 aa18.17■□□□□ 0.5
TRAPPC11-201ENST00000334690 MKRN3Q13064 507 aaKnown RBP18.17■□□□□ 0.5
TRAPPC11-201ENST00000334690 E2F4Q16254 413 aa18.17■□□□□ 0.5
TRAPPC11-201ENST00000334690 XKR3Q5GH77 459 aa18.17■□□□□ 0.5
TRAPPC11-201ENST00000334690 LRIG3Q6UXM1 1119 aa18.17■□□□□ 0.5
TRAPPC11-201ENST00000334690 DSTYKQ6XUX3 929 aa18.17■□□□□ 0.5
TRAPPC11-201ENST00000334690 SLC35G2Q8TBE7 412 aa18.17■□□□□ 0.5
TRAPPC11-201ENST00000334690 DHX38Q92620 1227 aaKnown RBP18.17■□□□□ 0.5
TRAPPC11-201ENST00000334690 RIT2Q99578 217 aa18.17■□□□□ 0.5
TRAPPC11-201ENST00000334690 FHOD1Q9Y613 1164 aa18.17■□□□□ 0.5
TRAPPC11-201ENST00000334690 KDM6AO15550 1401 aaPredicted RBP18.17■□□□□ 0.5
TRAPPC11-201ENST00000334690 CNTNAP4Q9C0A0 1308 aa18.17■□□□□ 0.5
TRAPPC11-201ENST00000334690 WDR46O15213 610 aaKnown RBP18.17■□□□□ 0.5
TRAPPC11-201ENST00000334690 MAP3K7O43318 606 aa18.17■□□□□ 0.5
TRAPPC11-201ENST00000334690 ANKRD20A4Q4UJ75 823 aa18.17■□□□□ 0.5
TRAPPC11-201ENST00000334690 ANKRD20A8PQ5CZ79 823 aa18.17■□□□□ 0.5
TRAPPC11-201ENST00000334690 ANKRD20A2Q5SQ80 823 aa18.17■□□□□ 0.5
TRAPPC11-201ENST00000334690 ANKRD20A1Q5TYW2 823 aa18.17■□□□□ 0.5
TRAPPC11-201ENST00000334690 MMGT1Q8N4V1 131 aa18.17■□□□□ 0.5
TRAPPC11-201ENST00000334690 NOA1Q8NC60 698 aaKnown RBP18.17■□□□□ 0.5
TRAPPC11-201ENST00000334690 C1orf54Q8WWF1 131 aa18.17■□□□□ 0.5
TRAPPC11-201ENST00000334690 JPH1Q9HDC5 661 aaPredicted RBP18.17■□□□□ 0.5
TRAPPC11-201ENST00000334690 THEGQ9P2T0 379 aa18.17■□□□□ 0.5
TRAPPC11-201ENST00000334690 PCSK1NQ9UHG2 260 aa18.17■□□□□ 0.5
TRAPPC11-201ENST00000334690 SLIT1O75093 1534 aa18.17■□□□□ 0.5
TRAPPC11-201ENST00000334690 GYG2O15488 501 aa18.17■□□□□ 0.5
TRAPPC11-201ENST00000334690 S100BP04271 92 aaPredicted RBP18.17■□□□□ 0.5
TRAPPC11-201ENST00000334690 SLC9A1P19634 815 aa18.17■□□□□ 0.5
TRAPPC11-201ENST00000334690 PEX19P40855 299 aa18.17■□□□□ 0.5
TRAPPC11-201ENST00000334690 DCLK2Q8N568 766 aa18.17■□□□□ 0.5
TRAPPC11-201ENST00000334690 MS4A14Q96JA4 679 aa18.17■□□□□ 0.5
TRAPPC11-201ENST00000334690 DIP2BQ9P265 1576 aa18.17■□□□□ 0.5
TRAPPC11-201ENST00000334690 AGTP01019 485 aa18.16■□□□□ 0.5
TRAPPC11-201ENST00000334690 NCF2P19878 526 aaPredicted RBP18.16■□□□□ 0.5
TRAPPC11-201ENST00000334690 KLHL8Q9P2G9 620 aaPredicted RBP18.16■□□□□ 0.5
TRAPPC11-201ENST00000334690 MDH1P40925 334 aaKnown RBP18.16■□□□□ 0.5
TRAPPC11-201ENST00000334690 KRT17Q04695 432 aa18.16■□□□□ 0.5
TRAPPC11-201ENST00000334690 VPS72Q15906 364 aa18.16■□□□□ 0.5
TRAPPC11-201ENST00000334690 FIGNQ5HY92 759 aa18.16■□□□□ 0.5
TRAPPC11-201ENST00000334690 LINC00116Q8NCU8 138 aa18.16■□□□□ 0.5
TRAPPC11-201ENST00000334690 BEST2Q8NFU1 509 aa18.16■□□□□ 0.5
TRAPPC11-201ENST00000334690 TTC1Q99614 292 aa18.16■□□□□ 0.5
TRAPPC11-201ENST00000334690 HAUS8Q9BT25 410 aa18.16■□□□□ 0.5
TRAPPC11-201ENST00000334690 RBM12Q9NTZ6 932 aaKnown RBP18.16■□□□□ 0.5
TRAPPC11-201ENST00000334690 STAP1Q9ULZ2 295 aa18.16■□□□□ 0.5
TRAPPC11-201ENST00000334690 HUS1O60921 280 aa18.16■□□□□ 0.5
TRAPPC11-201ENST00000334690 TMEM253P0C7T8 217 aa18.16■□□□□ 0.5
TRAPPC11-201ENST00000334690 TTLL4Q14679 1199 aa18.16■□□□□ 0.5
TRAPPC11-201ENST00000334690 ATP6V1E2Q96A05 226 aa18.16■□□□□ 0.5
TRAPPC11-201ENST00000334690 PDIA2Q13087 525 aaKnown RBP18.16■□□□□ 0.5
TRAPPC11-201ENST00000334690 ART3Q13508 389 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms