RNA–Protein interactions for RNA: ENST00000331920.10

PTCH1-201, Transcript of patched 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTCH1, Length 8,057 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-201ENST00000331920 PRPF18Q99633 342 aaKnown RBP17.34■□□□□ 0.37
PTCH1-201ENST00000331920 SERPINB13Q9UIV8 391 aa17.34■□□□□ 0.37
PTCH1-201ENST00000331920 IRF1P10914 325 aa17.34■□□□□ 0.37
PTCH1-201ENST00000331920 GUCA1AP43080 201 aaPredicted RBP17.34■□□□□ 0.37
PTCH1-201ENST00000331920 PARP9Q8IXQ6 854 aa17.34■□□□□ 0.37
PTCH1-201ENST00000331920 EMILIN3Q9NT22 766 aa17.34■□□□□ 0.37
PTCH1-201ENST00000331920 ABCC12Q96J65 1359 aa17.34■□□□□ 0.37
PTCH1-201ENST00000331920 PDIA2Q13087 525 aaKnown RBP17.33■□□□□ 0.37
PTCH1-201ENST00000331920 SURF1Q15526 300 aa17.33■□□□□ 0.37
PTCH1-201ENST00000331920 CC2D1AQ6P1N0 951 aaPredicted RBP17.33■□□□□ 0.37
PTCH1-201ENST00000331920 JADE3Q92613 823 aa17.33■□□□□ 0.37
PTCH1-201ENST00000331920 SERPINB4P48594 390 aa17.33■□□□□ 0.37
PTCH1-201ENST00000331920 BRIP1Q9BX63 1249 aa17.33■□□□□ 0.37
PTCH1-201ENST00000331920 RHBDL2Q9NX52 303 aa17.33■□□□□ 0.37
PTCH1-201ENST00000331920 MPP6Q9NZW5 540 aa17.33■□□□□ 0.37
PTCH1-201ENST00000331920 TJP2Q9UDY2 1190 aa17.33■□□□□ 0.37
PTCH1-201ENST00000331920 A0A0D9SFI3 127 aa17.33■□□□□ 0.36
PTCH1-201ENST00000331920 TK2O00142 265 aa17.33■□□□□ 0.36
PTCH1-201ENST00000331920 PGM1P36871 562 aa17.33■□□□□ 0.36
PTCH1-201ENST00000331920 PTH1RQ03431 593 aa17.33■□□□□ 0.36
PTCH1-201ENST00000331920 CDC37Q16543 378 aaPredicted RBP17.33■□□□□ 0.36
PTCH1-201ENST00000331920 AGAP3Q96P47 875 aa17.33■□□□□ 0.36
PTCH1-201ENST00000331920 GRIK1P39086 918 aa17.33■□□□□ 0.36
PTCH1-201ENST00000331920 PRR23AA6NEV1 266 aa17.33■□□□□ 0.36
PTCH1-201ENST00000331920 M0QYV0 167 aa17.33■□□□□ 0.36
PTCH1-201ENST00000331920 GGCXP38435 758 aa17.33■□□□□ 0.36
PTCH1-201ENST00000331920 EME1Q96AY2 570 aa17.33■□□□□ 0.36
PTCH1-201ENST00000331920 PRMT1Q99873 361 aaKnown RBP17.33■□□□□ 0.36
PTCH1-201ENST00000331920 MCM8Q9UJA3 840 aa17.33■□□□□ 0.36
PTCH1-201ENST00000331920 ABCC4O15439 1325 aa17.33■□□□□ 0.36
PTCH1-201ENST00000331920 RPS7P62081 194 aaKnown RBP17.33■□□□□ 0.36
PTCH1-201ENST00000331920 DPCR1Q3MIW9 517 aa17.33■□□□□ 0.36
PTCH1-201ENST00000331920 NUP85Q9BW27 656 aa17.33■□□□□ 0.36
PTCH1-201ENST00000331920 REXO4Q9GZR2 422 aaKnown RBP17.33■□□□□ 0.36
PTCH1-201ENST00000331920 CPB1P15086 417 aa17.32■□□□□ 0.36
PTCH1-201ENST00000331920 PMS2P54278 862 aa17.32■□□□□ 0.36
PTCH1-201ENST00000331920 ANKMY2Q8IV38 441 aa17.32■□□□□ 0.36
PTCH1-201ENST00000331920 FGAP02671 866 aa17.32■□□□□ 0.36
PTCH1-201ENST00000331920 GCP02774 474 aa17.32■□□□□ 0.36
PTCH1-201ENST00000331920 PLCG1P19174 1290 aa17.32■□□□□ 0.36
PTCH1-201ENST00000331920 ASPRV1Q53RT3 343 aa17.32■□□□□ 0.36
PTCH1-201ENST00000331920 C20orf96Q9NUD7 363 aaPredicted RBP17.32■□□□□ 0.36
PTCH1-201ENST00000331920 GRIN2BQ13224 1484 aa17.32■□□□□ 0.36
PTCH1-201ENST00000331920 IQCA1LA6NCM1 817 aa17.32■□□□□ 0.36
PTCH1-201ENST00000331920 NDUFA10O95299 355 aa17.32■□□□□ 0.36
PTCH1-201ENST00000331920 WDR11Q9BZH6 1224 aa17.32■□□□□ 0.36
PTCH1-201ENST00000331920 MAGEF1Q9HAY2 307 aa17.32■□□□□ 0.36
PTCH1-201ENST00000331920 CLDN3O15551 220 aa17.32■□□□□ 0.36
PTCH1-201ENST00000331920 CDH2P19022 906 aaPredicted RBP17.32■□□□□ 0.36
PTCH1-201ENST00000331920 EIF2AK2P19525 551 aaKnown RBP17.32■□□□□ 0.36
PTCH1-201ENST00000331920 ZNF568Q3ZCX4 644 aa17.32■□□□□ 0.36
PTCH1-201ENST00000331920 COMMD2Q86X83 199 aa17.32■□□□□ 0.36
PTCH1-201ENST00000331920 CNOT8Q9UFF9 292 aaKnown RBP17.32■□□□□ 0.36
PTCH1-201ENST00000331920 TBC1D12O60347 775 aa17.32■□□□□ 0.36
PTCH1-201ENST00000331920 CLCN6P51797 869 aa17.32■□□□□ 0.36
PTCH1-201ENST00000331920 CSNK2BP67870 215 aa17.32■□□□□ 0.36
PTCH1-201ENST00000331920 PHKG1Q16816 387 aa17.32■□□□□ 0.36
PTCH1-201ENST00000331920 EXD1Q8NHP7 514 aa17.32■□□□□ 0.36
PTCH1-201ENST00000331920 DHX35Q9H5Z1 703 aaKnown RBP17.32■□□□□ 0.36
PTCH1-201ENST00000331920 ABCD1P33897 745 aa17.32■□□□□ 0.36
PTCH1-201ENST00000331920 ZNF211Q13398 564 aaPredicted RBP17.32■□□□□ 0.36
PTCH1-201ENST00000331920 MIER2Q8N344 545 aa17.32■□□□□ 0.36
PTCH1-201ENST00000331920 NPHS2Q9NP85 383 aa17.32■□□□□ 0.36
PTCH1-201ENST00000331920 RIMS2Q9UQ26 1411 aa17.32■□□□□ 0.36
PTCH1-201ENST00000331920 HOXC9P31274 260 aa17.31■□□□□ 0.36
PTCH1-201ENST00000331920 SLFN12LQ6IEE8 588 aa17.31■□□□□ 0.36
PTCH1-201ENST00000331920 OLFML3Q9NRN5 406 aa17.31■□□□□ 0.36
PTCH1-201ENST00000331920 SYNGAP1Q96PV0 1343 aa17.31■□□□□ 0.36
PTCH1-201ENST00000331920 BTN2A1Q7KYR7 527 aa17.31■□□□□ 0.36
PTCH1-201ENST00000331920 GPT2Q8TD30 523 aa17.31■□□□□ 0.36
PTCH1-201ENST00000331920 DBNDD1Q9H9R9 158 aa17.31■□□□□ 0.36
PTCH1-201ENST00000331920 LAD1O00515 517 aa17.31■□□□□ 0.36
PTCH1-201ENST00000331920 SERPINB3P29508 390 aa17.31■□□□□ 0.36
PTCH1-201ENST00000331920 NFIL3Q16649 462 aa17.31■□□□□ 0.36
PTCH1-201ENST00000331920 SLC25A24Q6NUK1 477 aa17.31■□□□□ 0.36
PTCH1-201ENST00000331920 SIX5Q8N196 739 aa17.31■□□□□ 0.36
PTCH1-201ENST00000331920 SNRNP27Q8WVK2 155 aaKnown RBP17.31■□□□□ 0.36
PTCH1-201ENST00000331920 ELMO2Q96JJ3 720 aa17.31■□□□□ 0.36
PTCH1-201ENST00000331920 FAM96AQ9H5X1 160 aa17.31■□□□□ 0.36
PTCH1-201ENST00000331920 BABAM1Q9NWV8 329 aa17.31■□□□□ 0.36
PTCH1-201ENST00000331920 ZBTB7BO15156 539 aaPredicted RBP17.31■□□□□ 0.36
PTCH1-201ENST00000331920 MAPRE2Q15555 327 aa17.31■□□□□ 0.36
PTCH1-201ENST00000331920 RHPN2Q8IUC4 686 aa17.31■□□□□ 0.36
PTCH1-201ENST00000331920 MB21D1Q8N884 522 aa17.31■□□□□ 0.36
PTCH1-201ENST00000331920 CATSPER1Q8NEC5 780 aa17.31■□□□□ 0.36
PTCH1-201ENST00000331920 TMC2Q8TDI7 906 aa17.31■□□□□ 0.36
PTCH1-201ENST00000331920 DGKIO75912 1065 aa17.31■□□□□ 0.36
PTCH1-201ENST00000331920 FAM107AO95990 144 aa17.31■□□□□ 0.36
PTCH1-201ENST00000331920 GPR1P46091 355 aa17.31■□□□□ 0.36
PTCH1-201ENST00000331920 GPC3P51654 580 aa17.31■□□□□ 0.36
PTCH1-201ENST00000331920 CNGA2Q16280 664 aa17.31■□□□□ 0.36
PTCH1-201ENST00000331920 ZNF614Q8N883 585 aa17.31■□□□□ 0.36
PTCH1-201ENST00000331920 RBM41Q96IZ5 413 aaKnown RBP17.31■□□□□ 0.36
PTCH1-201ENST00000331920 MRPL1Q9BYD6 325 aaKnown RBP17.31■□□□□ 0.36
PTCH1-201ENST00000331920 SYDE2Q5VT97 1194 aa17.31■□□□□ 0.36
PTCH1-201ENST00000331920 USP17L2Q6R6M4 530 aa17.31■□□□□ 0.36
PTCH1-201ENST00000331920 ADAMTS1Q9UHI8 967 aa17.31■□□□□ 0.36
PTCH1-201ENST00000331920 NPATQ14207 1427 aa17.31■□□□□ 0.36
PTCH1-201ENST00000331920 TIAM1Q13009 1591 aa17.31■□□□□ 0.36
PTCH1-201ENST00000331920 USP14P54578 494 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms