RNA–Protein interactions for RNA: ENST00000316763.7

VRK3-201, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK3, Length 1,938 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-201ENST00000316763 CYFIP1Q7L576 1253 aa15.39■□□□□ 0.05
VRK3-201ENST00000316763 ZNF571Q7Z3V5 609 aaPredicted RBP15.39■□□□□ 0.05
VRK3-201ENST00000316763 SOCS4Q8WXH5 440 aa15.39■□□□□ 0.05
VRK3-201ENST00000316763 DIS3Q9Y2L1 958 aaKnown RBP15.39■□□□□ 0.05
VRK3-201ENST00000316763 TELO2Q9Y4R8 837 aa15.39■□□□□ 0.05
VRK3-201ENST00000316763 PSAPP07602 524 aa15.39■□□□□ 0.05
VRK3-201ENST00000316763 YWHABP31946 246 aaKnown RBP15.39■□□□□ 0.05
VRK3-201ENST00000316763 LMAN1P49257 510 aa15.39■□□□□ 0.05
VRK3-201ENST00000316763 FLT3LGP49771 235 aa15.39■□□□□ 0.05
VRK3-201ENST00000316763 RARRES1P49788 294 aa15.39■□□□□ 0.05
VRK3-201ENST00000316763 GYS2P54840 703 aa15.39■□□□□ 0.05
VRK3-201ENST00000316763 NEDD9Q14511 834 aa15.39■□□□□ 0.05
VRK3-201ENST00000316763 ZNF720Q7Z2F6 126 aa15.39■□□□□ 0.05
VRK3-201ENST00000316763 AENQ8WTP8 325 aaKnown RBP15.39■□□□□ 0.05
VRK3-201ENST00000316763 POLD4Q9HCU8 107 aa15.39■□□□□ 0.05
VRK3-201ENST00000316763 STIM2Q9P246 746 aa15.39■□□□□ 0.05
VRK3-201ENST00000316763 DAAM1Q9Y4D1 1078 aa15.39■□□□□ 0.05
VRK3-201ENST00000316763 CES2O00748 559 aa15.38■□□□□ 0.05
VRK3-201ENST00000316763 GFPT2O94808 682 aa15.38■□□□□ 0.05
VRK3-201ENST00000316763 FARP2O94887 1054 aaPredicted RBP15.38■□□□□ 0.05
VRK3-201ENST00000316763 FTCDO95954 541 aa15.38■□□□□ 0.05
VRK3-201ENST00000316763 HOXC6P09630 235 aa15.38■□□□□ 0.05
VRK3-201ENST00000316763 HSPA1AP0DMV8 641 aaKnown RBP15.38■□□□□ 0.05
VRK3-201ENST00000316763 HSPA1BP0DMV9 641 aaKnown RBP15.38■□□□□ 0.05
VRK3-201ENST00000316763 GUCY2CP25092 1073 aa15.38■□□□□ 0.05
VRK3-201ENST00000316763 TNFRSF8P28908 595 aa15.38■□□□□ 0.05
VRK3-201ENST00000316763 RGS2P41220 211 aa15.38■□□□□ 0.05
VRK3-201ENST00000316763 STAT1P42224 750 aa15.38■□□□□ 0.05
VRK3-201ENST00000316763 JAM2P57087 298 aa15.38■□□□□ 0.05
VRK3-201ENST00000316763 PRKCZQ05513 592 aa15.38■□□□□ 0.05
VRK3-201ENST00000316763 KCNA1Q09470 495 aa15.38■□□□□ 0.05
VRK3-201ENST00000316763 ODR4Q5SWX8 454 aa15.38■□□□□ 0.05
VRK3-201ENST00000316763 MIS18BP1Q6P0N0 1132 aa15.38■□□□□ 0.05
VRK3-201ENST00000316763 ALKBH5Q6P6C2 394 aaKnown RBP15.38■□□□□ 0.05
VRK3-201ENST00000316763 CCDC62Q6P9F0 684 aa15.38■□□□□ 0.05
VRK3-201ENST00000316763 MAMDC4Q6UXC1 1216 aa15.38■□□□□ 0.05
VRK3-201ENST00000316763 ARMCX2Q7L311 632 aa15.38■□□□□ 0.05
VRK3-201ENST00000316763 EEPD1Q7L9B9 569 aa15.38■□□□□ 0.05
VRK3-201ENST00000316763 LMBR1Q8WVP7 490 aa15.38■□□□□ 0.05
VRK3-201ENST00000316763 ATP6V0A1Q93050 837 aa15.38■□□□□ 0.05
VRK3-201ENST00000316763 BORCS6Q96GS4 357 aa15.38■□□□□ 0.05
VRK3-201ENST00000316763 MAML3Q96JK9 1138 aa15.38■□□□□ 0.05
VRK3-201ENST00000316763 SIX2Q9NPC8 291 aa15.38■□□□□ 0.05
VRK3-201ENST00000316763 ANKEF1Q9NU02 776 aa15.38■□□□□ 0.05
VRK3-201ENST00000316763 SLC5A4Q9NY91 659 aa15.38■□□□□ 0.05
VRK3-201ENST00000316763 NAGPAQ9UK23 515 aa15.38■□□□□ 0.05
VRK3-201ENST00000316763 INTUQ9ULD6 942 aa15.38■□□□□ 0.05
VRK3-201ENST00000316763 SYNGAP1Q96PV0 1343 aa15.38■□□□□ 0.05
VRK3-201ENST00000316763 ZMYM2Q9UBW7 1377 aa15.38■□□□□ 0.05
VRK3-201ENST00000316763 IGKV6D-21A0A0A0MT36 114 aa15.37■□□□□ 0.05
VRK3-201ENST00000316763 ZNF862O60290 1169 aa15.37■□□□□ 0.05
VRK3-201ENST00000316763 DKC1O60832 514 aaKnown RBP eCLIP15.37■□□□□ 0.056e-11■■■■■ 26.8
VRK3-201ENST00000316763 STBD1O95210 358 aa15.37■□□□□ 0.05
VRK3-201ENST00000316763 ARIH2O95376 493 aa15.37■□□□□ 0.05
VRK3-201ENST00000316763 SUPT20HL2P0C7V6 817 aa15.37■□□□□ 0.05
VRK3-201ENST00000316763 CCDC172P0C7W6 258 aa15.37■□□□□ 0.05
VRK3-201ENST00000316763 HSPA8P11142 646 aaKnown RBP15.37■□□□□ 0.05
VRK3-201ENST00000316763 HOXD10P28358 340 aa15.37■□□□□ 0.05
VRK3-201ENST00000316763 EPHB4P54760 987 aa15.37■□□□□ 0.05
VRK3-201ENST00000316763 PPP2R5AQ15172 486 aa15.37■□□□□ 0.05
VRK3-201ENST00000316763 ZC2HC1CQ53FD0 456 aaPredicted RBP15.37■□□□□ 0.05
VRK3-201ENST00000316763 METTL7BQ6UX53 244 aa15.37■□□□□ 0.05
VRK3-201ENST00000316763 CCDC60Q8IWA6 550 aaPredicted RBP15.37■□□□□ 0.05
VRK3-201ENST00000316763 PACSIN1Q9BY11 444 aa15.37■□□□□ 0.05
VRK3-201ENST00000316763 GABBR1Q9UBS5 961 aa15.37■□□□□ 0.05
VRK3-201ENST00000316763 SRRDQ9UH36 339 aa15.37■□□□□ 0.05
VRK3-201ENST00000316763 GNRH1P01148 92 aa15.37■□□□□ 0.05
VRK3-201ENST00000316763 MYBL2P10244 700 aa15.37■□□□□ 0.05
VRK3-201ENST00000316763 NOP2P46087 812 aaKnown RBP15.37■□□□□ 0.05
VRK3-201ENST00000316763 ALCAMQ13740 583 aa15.37■□□□□ 0.05
VRK3-201ENST00000316763 MYBPC2Q14324 1141 aa15.37■□□□□ 0.05
VRK3-201ENST00000316763 ARHGEF6Q15052 776 aa15.37■□□□□ 0.05
VRK3-201ENST00000316763 RPS6KA1Q15418 735 aa15.37■□□□□ 0.05
VRK3-201ENST00000316763 CCL14Q16627 93 aa15.37■□□□□ 0.05
VRK3-201ENST00000316763 LY6KQ17RY6 165 aa15.37■□□□□ 0.05
VRK3-201ENST00000316763 SWSAP1Q6NVH7 229 aa15.37■□□□□ 0.05
VRK3-201ENST00000316763 EMBQ6PCB8 327 aa15.37■□□□□ 0.05
VRK3-201ENST00000316763 PADI6Q6TGC4 694 aa15.37■□□□□ 0.05
VRK3-201ENST00000316763 FBXO16Q8IX29 292 aaPredicted RBP15.37■□□□□ 0.05
VRK3-201ENST00000316763 IFT20Q8IY31 132 aa15.37■□□□□ 0.05
VRK3-201ENST00000316763 SYCP3Q8IZU3 236 aa15.37■□□□□ 0.05
VRK3-201ENST00000316763 RBM12Q9NTZ6 932 aaKnown RBP15.37■□□□□ 0.05
VRK3-201ENST00000316763 DMAC2Q9NW81 257 aa15.37■□□□□ 0.05
VRK3-201ENST00000316763 FLRT1Q9NZU1 646 aa15.37■□□□□ 0.05
VRK3-201ENST00000316763 DMGDHQ9UI17 866 aaKnown RBP15.37■□□□□ 0.05
VRK3-201ENST00000316763 IGSF9BQ9UPX0 1349 aa15.36■□□□□ 0.05
VRK3-201ENST00000316763 RNF40O75150 1001 aa15.36■□□□□ 0.05
VRK3-201ENST00000316763 H2AFZP0C0S5 128 aa15.36■□□□□ 0.05
VRK3-201ENST00000316763 FMO5P49326 533 aa15.36■□□□□ 0.05
VRK3-201ENST00000316763 SP4Q02446 784 aa15.36■□□□□ 0.05
VRK3-201ENST00000316763 H2AFVQ71UI9 128 aa15.36■□□□□ 0.05
VRK3-201ENST00000316763 ANO5Q75V66 913 aa15.36■□□□□ 0.05
VRK3-201ENST00000316763 GSPT2Q8IYD1 628 aaKnown RBP15.36■□□□□ 0.05
VRK3-201ENST00000316763 MS4A14Q96JA4 679 aa15.36■□□□□ 0.05
VRK3-201ENST00000316763 PBKQ96KB5 322 aa15.36■□□□□ 0.05
VRK3-201ENST00000316763 APBA2Q99767 749 aa15.36■□□□□ 0.05
VRK3-201ENST00000316763 AGPAT3Q9NRZ7 376 aa15.36■□□□□ 0.05
VRK3-201ENST00000316763 SMARCAL1Q9NZC9 954 aa15.36■□□□□ 0.05
VRK3-201ENST00000316763 EHD2Q9NZN4 543 aa15.36■□□□□ 0.05
VRK3-201ENST00000316763 MAFBQ9Y5Q3 323 aaPredicted RBP15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms