RNA–Protein interactions for RNA: ENST00000225964.9

COL1A1-201, Transcript of collagen type I alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A1, Length 6,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-201ENST00000225964 RASA4O43374 803 aa14.05□□□□□ -0.16
COL1A1-201ENST00000225964 AARSP49588 968 aaKnown RBP eCLIP14.05□□□□□ -0.16
COL1A1-201ENST00000225964 MTBPQ96DY7 904 aa14.05□□□□□ -0.16
COL1A1-201ENST00000225964 CCDC151A5D8V7 595 aa14.05□□□□□ -0.16
COL1A1-201ENST00000225964 KLHL38Q2WGJ6 581 aa14.05□□□□□ -0.16
COL1A1-201ENST00000225964 ALS2CLQ60I27 953 aa14.05□□□□□ -0.16
COL1A1-201ENST00000225964 NUGGCQ68CJ6 796 aa14.05□□□□□ -0.16
COL1A1-201ENST00000225964 ATXN7L3BQ96GX2 97 aa14.05□□□□□ -0.16
COL1A1-201ENST00000225964 SCOCQ9UIL1 159 aa14.05□□□□□ -0.16
COL1A1-201ENST00000225964 FBXL5Q9UKA1 691 aa14.05□□□□□ -0.16
COL1A1-201ENST00000225964 APOL1O14791 398 aa14.05□□□□□ -0.16
COL1A1-201ENST00000225964 MAP4P27816 1152 aaKnown RBP14.05□□□□□ -0.16
COL1A1-201ENST00000225964 TRIML2Q8N7C3 387 aa14.05□□□□□ -0.16
COL1A1-201ENST00000225964 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.05□□□□□ -0.16
COL1A1-201ENST00000225964 EIF2AK1Q9BQI3 630 aaKnown RBP14.05□□□□□ -0.16
COL1A1-201ENST00000225964 TRIM62Q9BVG3 475 aa14.05□□□□□ -0.16
COL1A1-201ENST00000225964 PITPNM3Q9BZ71 974 aa14.05□□□□□ -0.16
COL1A1-201ENST00000225964 SPDYE5A6NIY4 337 aa14.05□□□□□ -0.16
COL1A1-201ENST00000225964 TMED1Q13445 227 aa14.05□□□□□ -0.16
COL1A1-201ENST00000225964 KNOP1Q1ED39 458 aaKnown RBP14.05□□□□□ -0.16
COL1A1-201ENST00000225964 SPDYE7PQ495Y7 208 aa14.05□□□□□ -0.16
COL1A1-201ENST00000225964 RGS9BPQ6ZS82 235 aa14.05□□□□□ -0.16
COL1A1-201ENST00000225964 CDKL3Q8IVW4 592 aaPredicted RBP14.05□□□□□ -0.16
COL1A1-201ENST00000225964 PPM1NQ8N819 430 aa14.05□□□□□ -0.16
COL1A1-201ENST00000225964 ZNF507Q8TCN5 953 aa14.05□□□□□ -0.16
COL1A1-201ENST00000225964 PLEKHA5Q9HAU0 1116 aa14.05□□□□□ -0.16
COL1A1-201ENST00000225964 ROBO2Q9HCK4 1378 aa14.05□□□□□ -0.16
COL1A1-201ENST00000225964 DCTN3O75935 186 aa14.05□□□□□ -0.16
COL1A1-201ENST00000225964 ARIH2O95376 493 aa14.05□□□□□ -0.16
COL1A1-201ENST00000225964 CASP1P29466 404 aa14.05□□□□□ -0.16
COL1A1-201ENST00000225964 HMGCS2P54868 508 aa14.05□□□□□ -0.16
COL1A1-201ENST00000225964 GPS1Q13098 491 aa14.05□□□□□ -0.16
COL1A1-201ENST00000225964 ADCK2Q7Z695 626 aa14.05□□□□□ -0.16
COL1A1-201ENST00000225964 EFHBQ8N7U6 833 aa14.05□□□□□ -0.16
COL1A1-201ENST00000225964 FAM20AQ96MK3 541 aa14.05□□□□□ -0.16
COL1A1-201ENST00000225964 DDX56Q9NY93 547 aaKnown RBP14.05□□□□□ -0.16
COL1A1-201ENST00000225964 SELENONQ9NZV5 590 aa14.05□□□□□ -0.16
COL1A1-201ENST00000225964 LSM7Q9UK45 103 aaKnown RBP14.05□□□□□ -0.16
COL1A1-201ENST00000225964 TADA3O75528 432 aa14.04□□□□□ -0.16
COL1A1-201ENST00000225964 TXNP10599 105 aaKnown RBP14.04□□□□□ -0.16
COL1A1-201ENST00000225964 CDK17Q00537 523 aa14.04□□□□□ -0.16
COL1A1-201ENST00000225964 KCNH2Q12809 1159 aa14.04□□□□□ -0.16
COL1A1-201ENST00000225964 MORF4L2Q15014 288 aa14.04□□□□□ -0.16
COL1A1-201ENST00000225964 KYAT1Q16773 422 aa14.04□□□□□ -0.16
COL1A1-201ENST00000225964 ZNF746Q6NUN9 644 aaPredicted RBP14.04□□□□□ -0.16
COL1A1-201ENST00000225964 TBC1D19Q8N5T2 526 aa14.04□□□□□ -0.16
COL1A1-201ENST00000225964 SLC13A1Q9BZW2 595 aa14.04□□□□□ -0.16
COL1A1-201ENST00000225964 ING2Q9H160 280 aa14.04□□□□□ -0.16
COL1A1-201ENST00000225964 MTIF3Q9H2K0 278 aaKnown RBP14.04□□□□□ -0.16
COL1A1-201ENST00000225964 PCDHB8Q9UN66 801 aa14.04□□□□□ -0.16
COL1A1-201ENST00000225964 ATP9BO43861 1147 aa14.04□□□□□ -0.16
COL1A1-201ENST00000225964 DIAPH2O60879 1101 aa14.04□□□□□ -0.16
COL1A1-201ENST00000225964 AGO2Q9UKV8 859 aaKnown RBP14.04□□□□□ -0.16
COL1A1-201ENST00000225964 KIF28PB7ZC32 967 aa14.04□□□□□ -0.16
COL1A1-201ENST00000225964 GRM4Q14833 912 aa14.04□□□□□ -0.16
COL1A1-201ENST00000225964 FASTKD1Q53R41 847 aaKnown RBP14.04□□□□□ -0.16
COL1A1-201ENST00000225964 PPHLN1Q8NEY8 458 aaKnown RBP14.04□□□□□ -0.16
COL1A1-201ENST00000225964 KDM4CQ9H3R0 1056 aa14.04□□□□□ -0.16
COL1A1-201ENST00000225964 ADA2Q9NZK5 511 aa14.04□□□□□ -0.16
COL1A1-201ENST00000225964 EFCAB14O75071 495 aa14.04□□□□□ -0.16
COL1A1-201ENST00000225964 KCNA2P16389 499 aa14.04□□□□□ -0.16
COL1A1-201ENST00000225964 TAF1CQ15572 869 aaPredicted RBP14.04□□□□□ -0.16
COL1A1-201ENST00000225964 RRM2BQ7LG56 351 aa14.04□□□□□ -0.16
COL1A1-201ENST00000225964 GLYCTKQ8IVS8 523 aa14.04□□□□□ -0.16
COL1A1-201ENST00000225964 MFN1Q8IWA4 741 aa14.04□□□□□ -0.16
COL1A1-201ENST00000225964 ELAC2Q9BQ52 826 aaKnown RBP14.04□□□□□ -0.16
COL1A1-201ENST00000225964 RCOR1Q9UKL0 485 aa14.04□□□□□ -0.16
COL1A1-201ENST00000225964 LRRC53A6NM62 1247 aa14.04□□□□□ -0.16
COL1A1-201ENST00000225964 PRRG1O14668 218 aa14.04□□□□□ -0.16
COL1A1-201ENST00000225964 ZNF211Q13398 564 aaPredicted RBP14.04□□□□□ -0.16
COL1A1-201ENST00000225964 PATL1Q86TB9 770 aaKnown RBP14.04□□□□□ -0.16
COL1A1-201ENST00000225964 AIPL1Q9NZN9 384 aa14.04□□□□□ -0.16
COL1A1-201ENST00000225964 MFAP3LO75121 409 aa14.04□□□□□ -0.16
COL1A1-201ENST00000225964 CHRNA5P30532 468 aa14.04□□□□□ -0.16
COL1A1-201ENST00000225964 CELF1Q92879 486 aaKnown RBP14.04□□□□□ -0.16
COL1A1-201ENST00000225964 MUC3BQ9H195 1237 aa14.04□□□□□ -0.16
COL1A1-201ENST00000225964 CCDC90BQ9GZT6 254 aa14.03□□□□□ -0.16
COL1A1-201ENST00000225964 PRKCBP05771 671 aa14.03□□□□□ -0.16
COL1A1-201ENST00000225964 MYBL1P10243 752 aa14.03□□□□□ -0.16
COL1A1-201ENST00000225964 TPI1P60174 286 aa14.03□□□□□ -0.16
COL1A1-201ENST00000225964 PROM2Q8N271 834 aa14.03□□□□□ -0.16
COL1A1-201ENST00000225964 RNF149Q8NC42 400 aa14.03□□□□□ -0.16
COL1A1-201ENST00000225964 SEPT5Q99719 369 aaPredicted RBP14.03□□□□□ -0.16
COL1A1-201ENST00000225964 ZFYVE28Q9HCC9 887 aa14.03□□□□□ -0.16
COL1A1-201ENST00000225964 DISP1Q96F81 1524 aa14.03□□□□□ -0.16
COL1A1-201ENST00000225964 F5H6K3 240 aa14.03□□□□□ -0.16
COL1A1-201ENST00000225964 SNAP23O00161 211 aa14.03□□□□□ -0.16
COL1A1-201ENST00000225964 KRT7P08729 469 aa14.03□□□□□ -0.16
COL1A1-201ENST00000225964 KLRC3Q07444 240 aa14.03□□□□□ -0.16
COL1A1-201ENST00000225964 CALR3Q96L12 384 aaKnown RBP14.03□□□□□ -0.16
COL1A1-201ENST00000225964 ZFP69BQ9UJL9 534 aa14.03□□□□□ -0.16
COL1A1-201ENST00000225964 LMNAP02545 664 aaKnown RBP14.03□□□□□ -0.16
COL1A1-201ENST00000225964 PKN3Q6P5Z2 889 aa14.03□□□□□ -0.16
COL1A1-201ENST00000225964 KATNAL1Q9BW62 490 aa14.03□□□□□ -0.16
COL1A1-201ENST00000225964 H7C1W4 665 aa14.03□□□□□ -0.16
COL1A1-201ENST00000225964 GYG2O15488 501 aa14.03□□□□□ -0.16
COL1A1-201ENST00000225964 PRCPP42785 496 aa14.03□□□□□ -0.16
COL1A1-201ENST00000225964 MICALL2Q8IY33 904 aa14.03□□□□□ -0.16
COL1A1-201ENST00000225964 APPL2Q8NEU8 664 aa14.03□□□□□ -0.16
COL1A1-201ENST00000225964 RFWD2Q8NHY2 731 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms