RNA–Protein interactions for RNA: ENSMUST00000076265.12

Upf3b-201, Transcript of UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3b, Length 2,344 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3b-201ENSMUST00000076265 Pcdhgc5Q91XW9 944 aa9.81□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Bcl7bQ921K9 202 aa9.81□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Cog2Q921L5 731 aa9.81□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Eif2s2Q99L45 331 aaKnown RBP9.81□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Eaf1Q9D4C5 268 aa9.81□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Rp2Q9EPK2 347 aa9.81□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Tnfrsf21Q9EPU5 655 aa9.81□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Rock2P70336 1388 aa9.8□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Sbno1Q689Z5 1390 aa9.8□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Gm2956E9PVJ0 216 aa9.8□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Zkscan2G3X952 960 aa9.8□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Gm8108K7N734 216 aa9.8□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Gm3488M0QW81 238 aa9.8□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Galnt1O08912 559 aaKnown RBP9.8□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Flot1O08917 428 aa9.8□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Bmpr2O35607 1038 aa9.8□□□□□ -0.84
Upf3b-201ENSMUST00000076265 PigrO70570 771 aa9.8□□□□□ -0.84
Upf3b-201ENSMUST00000076265 PahP16331 453 aa9.8□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Ccnb1P24860 430 aa9.8□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Fhdc1Q3ULZ2 1149 aa9.8□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Abcb7Q61102 752 aaKnown RBP9.8□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Snrnp70Q62376 448 aaKnown RBP9.8□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Esco1Q69Z69 843 aa9.8□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Ltv1Q6NSQ7 470 aaKnown RBP9.8□□□□□ -0.84
Upf3b-201ENSMUST00000076265 AY358078Q6UY53 465 aa9.8□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Got1l1Q7TSV6 404 aa9.8□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Ddhd2Q80Y98 699 aa9.8□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Rufy1Q8BIJ7 712 aa9.8□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Pcyox1lQ8C7K6 495 aa9.8□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Olfr1342Q8VFY3 315 aa9.8□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Vps11Q91W86 941 aaKnown RBP9.8□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Dppa2Q9CWH0 301 aa9.8□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Zc3h8Q9JJ48 305 aaKnown RBP9.8□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Adam25Q9R159 760 aa9.8□□□□□ -0.84
Upf3b-201ENSMUST00000076265 PfkpQ9WUA3 784 aaKnown RBP9.8□□□□□ -0.84
Upf3b-201ENSMUST00000076265 PaskQ8CEE6 1383 aa9.8□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Ttc13A0A1L1SSC7 844 aa9.79□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Kif23E9Q5G3 953 aa9.79□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Folh1O35409 752 aa9.79□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Fgd3O88842 733 aa9.79□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Usp4P35123 962 aa9.79□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Id4P41139 161 aa9.79□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Akr1b1P45376 316 aa9.79□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Smyd1P97443 490 aa9.79□□□□□ -0.84
Upf3b-201ENSMUST00000076265 ArvcfP98203 962 aa9.79□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Gcnt1Q09324 428 aa9.79□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Zkscan4Q5SZT6 480 aa9.79□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Clec4a4Q5YIR8 236 aa9.79□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Ptp4a1Q63739 173 aa9.79□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Tra2aQ6PFR5 281 aaKnown RBP9.79□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Foxo6Q70KY4 559 aa9.79□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Sv2bQ8BG39 683 aa9.79□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Sept11Q8C1B7 431 aaKnown RBP9.79□□□□□ -0.84
Upf3b-201ENSMUST00000076265 IrgcQ8C262 412 aa9.79□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Fam204aQ8C6C7 236 aa9.79□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Henmt1Q8CAE2 395 aa9.79□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Rassf4Q8CB96 322 aa9.79□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Wdr12Q9JJA4 423 aa9.79□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Cdkl2Q9QUK0 568 aa9.79□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Dnajb1Q9QYJ3 340 aaKnown RBP9.79□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Spo11Q9WTK8 396 aa9.79□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Nphp3Q7TNH6 1325 aa9.79□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Gm5737A0A140LI11 423 aa9.79□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Gm15262A0A140LIQ5 728 aa9.79□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Mctp1E9PV86 951 aa9.79□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Gm21789J3QMZ1 123 aa9.79□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Gm21870J3QPN2 123 aa9.79□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Prkar1bP12849 381 aa9.79□□□□□ -0.84
Upf3b-201ENSMUST00000076265 InsrP15208 1372 aa9.79□□□□□ -0.84
Upf3b-201ENSMUST00000076265 SftpcP21841 193 aa9.79□□□□□ -0.84
Upf3b-201ENSMUST00000076265 RxrbP28704 520 aa9.79□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Pola1P33609 1465 aa9.79□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Tpm1P58771 284 aa9.79□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Plbd2Q3TCN2 594 aa9.79□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Map9Q3TRR0 646 aa9.79□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Trim25Q61510 634 aaKnown RBP9.79□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Xpo1Q6P5F9 1071 aaKnown RBP9.79□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Mtss1lQ6P9S0 715 aa9.79□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Wdr43Q6ZQL4 677 aaKnown RBP9.79□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Uts2bQ765I1 113 aa9.79□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Actn1Q7TPR4 892 aaKnown RBP9.79□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Lrfn2Q80TG9 788 aa9.79□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Maip1Q8BHE8 291 aa9.79□□□□□ -0.84
Upf3b-201ENSMUST00000076265 CtsoQ8BM88 312 aa9.79□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Egfem1Q8C088 590 aa9.79□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Rassf8Q8CJ96 419 aa9.79□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Nudt13Q8JZU0 352 aa9.79□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Prmt3Q922H1 532 aa9.79□□□□□ -0.84
Upf3b-201ENSMUST00000076265 NwcQ9CQI4 244 aa9.79□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Glrx3Q9CQM9 337 aa9.79□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Telo2Q9DC40 840 aaKnown RBP9.79□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Acsl4Q9QUJ7 711 aa9.79□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Wdr46Q9Z0H1 622 aaKnown RBP9.79□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Zmym3Q9JLM4 1370 aa9.78□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Pet2A2AHY8 747 aa9.78□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Olfr552E9Q545 317 aa9.78□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Mroh4G3X8W1 983 aa9.78□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Fcgr2P08101 330 aa9.78□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Rfc1P35601 1131 aa9.78□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Nedd4P46935 887 aaKnown RBP9.78□□□□□ -0.84
Retrieved 100 of 22,080 RNA–protein pairs in 72.9 ms