RNA–Protein interactions for RNA: YPL089C

RLM1, Transcript of MADS-box transcription factor, yeast

Gene RLM1, Length 2,031 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RLM1	YPL089C	IME2	P32581	645 aa		1.38	□□□□□ -2.19
RLM1	YPL089C	PRS1	P32895	427 aa	Known RBP	1.38	□□□□□ -2.19
RLM1	YPL089C	SPT4	P32914	102 aa	Predicted RBP	1.38	□□□□□ -2.19
RLM1	YPL089C	GPI18	P38211	433 aa		1.38	□□□□□ -2.19
RLM1	YPL089C	SHE3	P38272	425 aa	Known RBP	1.38	□□□□□ -2.19
RLM1	YPL089C	BMT2	P38278	337 aa		1.38	□□□□□ -2.19
RLM1	YPL089C	TAE1	P38340	232 aa		1.38	□□□□□ -2.19
RLM1	YPL089C	YPT32	P51996	222 aa	Known RBP	1.38	□□□□□ -2.19
RLM1	YPL089C	SDS23	P53172	527 aa		1.38	□□□□□ -2.19
RLM1	YPL089C	YNR066C	P53752	436 aa		1.38	□□□□□ -2.19
RLM1	YPL089C	MRX11	Q03079	207 aa		1.38	□□□□□ -2.19
RLM1	YPL089C	GRX3	Q03835	250 aa		1.38	□□□□□ -2.19
RLM1	YPL089C	GMC1	Q04399	608 aa		1.38	□□□□□ -2.19
RLM1	YPL089C	SRO7	Q12038	1033 aa		1.38	□□□□□ -2.19
RLM1	YPL089C	YPL245W	Q12179	454 aa	Known RBP	1.38	□□□□□ -2.19
RLM1	YPL089C	MED4	Q12343	284 aa		1.38	□□□□□ -2.19
RLM1	YPL089C	YPR064W	Q12492	139 aa		1.38	□□□□□ -2.19
RLM1	YPL089C	YBL111C	Q3E7Y5	667 aa		1.38	□□□□□ -2.19
RLM1	YPL089C	YBR056W-A	I2HB52	66 aa		1.37	□□□□□ -2.19
RLM1	YPL089C	COX4	P04037	155 aa		1.37	□□□□□ -2.19
RLM1	YPL089C	DAL82	P21705	255 aa		1.37	□□□□□ -2.19
RLM1	YPL089C	IES6	P32617	166 aa		1.37	□□□□□ -2.19
RLM1	YPL089C	SMP1	P38128	452 aa		1.37	□□□□□ -2.19
RLM1	YPL089C	HSM3	P38348	480 aa		1.37	□□□□□ -2.19
RLM1	YPL089C	YHR045W	P38775	560 aa		1.37	□□□□□ -2.19
RLM1	YPL089C	VAB2	P40003	282 aa		1.37	□□□□□ -2.19
RLM1	YPL089C	ALD5	P40047	520 aa	Known RBP	1.37	□□□□□ -2.19
RLM1	YPL089C	COA1	P40452	197 aa		1.37	□□□□□ -2.19
RLM1	YPL089C	LIA1	P47120	325 aa	Known RBP	1.37	□□□□□ -2.19
RLM1	YPL089C	PGU1	P47180	361 aa		1.37	□□□□□ -2.19
RLM1	YPL089C	ALG11	P53954	548 aa	Known RBP	1.37	□□□□□ -2.19
RLM1	YPL089C	CDC14	Q00684	551 aa		1.37	□□□□□ -2.19
RLM1	YPL089C	TPS1	Q00764	495 aa	Known RBP	1.37	□□□□□ -2.19
RLM1	YPL089C	RPL21A	Q02753	160 aa	Known RBP	1.37	□□□□□ -2.19
RLM1	YPL089C	INP2	Q03824	705 aa		1.37	□□□□□ -2.19
RLM1	YPL089C	PEX30	Q06169	523 aa		1.37	□□□□□ -2.19
RLM1	YPL089C	YOR292C	Q08743	309 aa		1.37	□□□□□ -2.19
RLM1	YPL089C	TFC7	Q12415	435 aa		1.37	□□□□□ -2.19
RLM1	YPL089C	FOL3	Q12676	427 aa	Predicted RBP	1.37	□□□□□ -2.19
RLM1	YPL089C	LAG2	Q92325	660 aa		1.37	□□□□□ -2.19
RLM1	YPL089C	HIS1	P00498	297 aa	Known RBP	1.37	□□□□□ -2.19
RLM1	YPL089C	RAD3	P06839	778 aa		1.37	□□□□□ -2.19
RLM1	YPL089C	ASP3-2	P0CX77	362 aa		1.37	□□□□□ -2.19
RLM1	YPL089C	ASP3-3	P0CX78	362 aa		1.37	□□□□□ -2.19
RLM1	YPL089C	ASP3-4	P0CX79	362 aa		1.37	□□□□□ -2.19
RLM1	YPL089C	ASP3-1	P0CZ17	362 aa		1.37	□□□□□ -2.19
RLM1	YPL089C	IFM1	P25038	676 aa		1.37	□□□□□ -2.19
RLM1	YPL089C	MRPL6	P32904	214 aa		1.37	□□□□□ -2.19
RLM1	YPL089C	CSE1	P33307	960 aa		1.37	□□□□□ -2.19
RLM1	YPL089C	YKL187C	P34231	750 aa		1.37	□□□□□ -2.19
RLM1	YPL089C	YBR062C	P38239	180 aa		1.37	□□□□□ -2.19
RLM1	YPL089C	BIG1	P38813	335 aa		1.37	□□□□□ -2.19
RLM1	YPL089C	YIA6	P40556	373 aa		1.37	□□□□□ -2.19
RLM1	YPL089C	BNA6	P43619	295 aa		1.37	□□□□□ -2.19
RLM1	YPL089C	YNL040W	P53960	456 aa	Predicted RBP	1.37	□□□□□ -2.19
RLM1	YPL089C	BOP2	Q06150	570 aa		1.37	□□□□□ -2.19
RLM1	YPL089C	ARV1	Q06541	321 aa		1.37	□□□□□ -2.19
RLM1	YPL089C	MMT2	Q08970	484 aa		1.37	□□□□□ -2.19
RLM1	YPL089C	MRP1	P10662	321 aa	Known RBP	1.36	□□□□□ -2.19
RLM1	YPL089C	RRT12	P25381	491 aa		1.36	□□□□□ -2.19
RLM1	YPL089C	POF1	P25576	258 aa		1.36	□□□□□ -2.19
RLM1	YPL089C	ARO4	P32449	370 aa	Known RBP	1.36	□□□□□ -2.19
RLM1	YPL089C	AEP1	P32493	518 aa		1.36	□□□□□ -2.19
RLM1	YPL089C	CYM1	P32898	989 aa		1.36	□□□□□ -2.19
RLM1	YPL089C	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	1.36	□□□□□ -2.19	not detected
RLM1	YPL089C	GPX1	P36014	167 aa		1.36	□□□□□ -2.19
RLM1	YPL089C	MRPL27	P36526	146 aa	Predicted RBP	1.36	□□□□□ -2.19
RLM1	YPL089C	PRS4	P38063	326 aa	Predicted RBP	1.36	□□□□□ -2.19
RLM1	YPL089C	EFM1	P38732	585 aa		1.36	□□□□□ -2.19
RLM1	YPL089C	GGC1	P38988	300 aa		1.36	□□□□□ -2.19
RLM1	YPL089C	NPT1	P39683	429 aa	Known RBP	1.36	□□□□□ -2.19
RLM1	YPL089C	HIT1	P46973	164 aa		1.36	□□□□□ -2.19
RLM1	YPL089C	TAD2	P47058	250 aa		1.36	□□□□□ -2.19
RLM1	YPL089C	YPS5	P53057	165 aa		1.36	□□□□□ -2.19
RLM1	YPL089C	VEL1	P53058	206 aa		1.36	□□□□□ -2.19
RLM1	YPL089C	TPN1	P53099	579 aa		1.36	□□□□□ -2.19
RLM1	YPL089C	PEX31	P53203	462 aa		1.36	□□□□□ -2.19
RLM1	YPL089C	TIM21	P53220	239 aa		1.36	□□□□□ -2.19
RLM1	YPL089C	FMP48	P53233	369 aa		1.36	□□□□□ -2.19
RLM1	YPL089C	MRPS16	Q02608	121 aa		1.36	□□□□□ -2.19
RLM1	YPL089C	SRL4	Q03085	281 aa		1.36	□□□□□ -2.19
RLM1	YPL089C	INP1	Q03694	420 aa		1.36	□□□□□ -2.19
RLM1	YPL089C	OST6	Q03723	332 aa		1.36	□□□□□ -2.19
RLM1	YPL089C	TSA2	Q04120	196 aa		1.36	□□□□□ -2.19
RLM1	YPL089C	DPP1	Q05521	289 aa		1.36	□□□□□ -2.19
RLM1	YPL089C	SFH1	Q06168	426 aa		1.36	□□□□□ -2.19
RLM1	YPL089C	SDO1	Q07953	250 aa	Known RBP	1.36	□□□□□ -2.19
RLM1	YPL089C	YDR018C	Q12185	396 aa		1.36	□□□□□ -2.19
RLM1	YPL089C	YOR114W	Q12219	294 aa		1.36	□□□□□ -2.19
RLM1	YPL089C	YOR029W	Q12243	111 aa		1.36	□□□□□ -2.19
RLM1	YPL089C	ATG31	Q12421	196 aa		1.36	□□□□□ -2.19
RLM1	YPL089C	RPP0	P05317	312 aa	Known RBP	1.35	□□□□□ -2.19
RLM1	YPL089C	DAL81	P21657	970 aa		1.35	□□□□□ -2.19
RLM1	YPL089C	EPT1	P22140	391 aa		1.35	□□□□□ -2.19
RLM1	YPL089C	PCL1	P24867	279 aa		1.35	□□□□□ -2.19
RLM1	YPL089C	SPS19	P32573	292 aa	Known RBP	1.35	□□□□□ -2.19
RLM1	YPL089C	CDC13	P32797	924 aa	Known RBP	1.35	□□□□□ -2.19
RLM1	YPL089C	TIP20	P33891	701 aa		1.35	□□□□□ -2.19
RLM1	YPL089C	RFT1	P38206	574 aa	Predicted RBP	1.35	□□□□□ -2.19
RLM1	YPL089C	FMC1	P40491	155 aa		1.35	□□□□□ -2.19

Retrieved 100 of 5,963 RNA–protein pairs in 23.3 ms