RNA–Protein interactions for RNA: YNL293W

MSB3, Transcript of Rab GTPase-activating protein, yeast

Gene MSB3, Length 1,902 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MSB3	YNL293W	DUS1	P53759	423 aa	Known RBP	6.65	□□□□□ -1.34
MSB3	YNL293W	SPP2	Q02521	185 aa		6.65	□□□□□ -1.34
MSB3	YNL293W	PRM6	Q04705	352 aa		6.65	□□□□□ -1.34
MSB3	YNL293W	YMR034C	Q05131	434 aa	Predicted RBP	6.65	□□□□□ -1.34
MSB3	YNL293W	YLR271W	Q06152	274 aa		6.65	□□□□□ -1.34
MSB3	YNL293W	NUT2	Q06213	157 aa		6.65	□□□□□ -1.34
MSB3	YNL293W	PUN1	Q06991	263 aa		6.65	□□□□□ -1.34
MSB3	YNL293W	VTS1	Q08831	523 aa	Known RBP RIP-Chip data	6.65	□□□□□ -1.34	not detected
MSB3	YNL293W	GPM2	Q12008	311 aa		6.65	□□□□□ -1.34
MSB3	YNL293W	PDH1	Q12428	516 aa	Known RBP	6.65	□□□□□ -1.34
MSB3	YNL293W	FRE6	Q12473	712 aa		6.65	□□□□□ -1.34
MSB3	YNL293W	CMR1	Q12510	522 aa	Known RBP	6.65	□□□□□ -1.34
MSB3	YNL293W	YOL163W	P0CF20	169 aa		6.64	□□□□□ -1.35
MSB3	YNL293W	STE50	P25344	346 aa		6.64	□□□□□ -1.35
MSB3	YNL293W	PUP3	P25451	205 aa	Known RBP	6.64	□□□□□ -1.35
MSB3	YNL293W	ADD66	P36040	267 aa		6.64	□□□□□ -1.35
MSB3	YNL293W	YER085C	P40058	173 aa		6.64	□□□□□ -1.35
MSB3	YNL293W	YER121W	P40076	114 aa		6.64	□□□□□ -1.35
MSB3	YNL293W	YIL089W	P40500	205 aa		6.64	□□□□□ -1.35
MSB3	YNL293W	RMD8	P43620	662 aa		6.64	□□□□□ -1.35
MSB3	YNL293W	YGL114W	P53134	725 aa		6.64	□□□□□ -1.35
MSB3	YNL293W	GPI15	P53961	229 aa		6.64	□□□□□ -1.35
MSB3	YNL293W	ACT1	P60010	375 aa	Known RBP	6.64	□□□□□ -1.35
MSB3	YNL293W	RPL34A	P87262	121 aa	Predicted RBP	6.64	□□□□□ -1.35
MSB3	YNL293W	ROD1	Q02805	837 aa		6.64	□□□□□ -1.35
MSB3	YNL293W	YPL077C	Q02831	240 aa		6.64	□□□□□ -1.35
MSB3	YNL293W	ANT1	Q06497	328 aa		6.64	□□□□□ -1.35
MSB3	YNL293W	MRPL35	Q06678	367 aa		6.64	□□□□□ -1.35
MSB3	YNL293W	PPM2	Q08282	695 aa		6.64	□□□□□ -1.35
MSB3	YNL293W	GRE1	Q08969	168 aa		6.64	□□□□□ -1.35
MSB3	YNL293W	TIF6	Q12522	245 aa	Known RBP	6.64	□□□□□ -1.35
MSB3	YNL293W	YRF1-1	P0CX20	1796 aa		6.64	□□□□□ -1.35
MSB3	YNL293W	YRF1-5	P0CX21	1796 aa		6.64	□□□□□ -1.35
MSB3	YNL293W	YRF1-8	P0CX22	1796 aa		6.64	□□□□□ -1.35
MSB3	YNL293W	COX6	P00427	148 aa		6.64	□□□□□ -1.35
MSB3	YNL293W	CDC4	P07834	779 aa		6.64	□□□□□ -1.35
MSB3	YNL293W	SST2	P11972	698 aa	Known RBP	6.64	□□□□□ -1.35
MSB3	YNL293W	CBS1	P14066	229 aa		6.64	□□□□□ -1.35
MSB3	YNL293W	MNS1	P32906	549 aa		6.64	□□□□□ -1.35
MSB3	YNL293W	CLB6	P32943	380 aa		6.64	□□□□□ -1.35
MSB3	YNL293W	UPS2	P35200	230 aa		6.64	□□□□□ -1.35
MSB3	YNL293W	MCH2	P36032	473 aa		6.64	□□□□□ -1.35
MSB3	YNL293W	AHP1	P38013	176 aa	Known RBP	6.64	□□□□□ -1.35
MSB3	YNL293W	HEM14	P40012	539 aa		6.64	□□□□□ -1.35
MSB3	YNL293W	KTR7	P40504	517 aa		6.64	□□□□□ -1.35
MSB3	YNL293W	YJL163C	P46996	555 aa		6.64	□□□□□ -1.35
MSB3	YNL293W	YPR109W	Q06104	294 aa		6.64	□□□□□ -1.35
MSB3	YNL293W	ISA2	Q12425	185 aa		6.64	□□□□□ -1.35
MSB3	YNL293W	AIM45	Q12480	344 aa	Known RBP	6.64	□□□□□ -1.35
MSB3	YNL293W	CTF3	Q12748	733 aa		6.64	□□□□□ -1.35
MSB3	YNL293W	YLR099W-A	Q3E798	87 aa		6.64	□□□□□ -1.35
MSB3	YNL293W	THP2	O13539	261 aa	Known RBP	6.63	□□□□□ -1.35
MSB3	YNL293W	SFC1	P33303	322 aa		6.63	□□□□□ -1.35
MSB3	YNL293W	MSN2	P33748	704 aa		6.63	□□□□□ -1.35
MSB3	YNL293W	SHE2	P36068	246 aa	Known RBP RIP-Chip data	6.63	□□□□□ -1.35	not detected
MSB3	YNL293W	MRPL11	P36521	249 aa	Predicted RBP	6.63	□□□□□ -1.35
MSB3	YNL293W	QDR3	P38227	689 aa		6.63	□□□□□ -1.35
MSB3	YNL293W	SPL2	P38839	148 aa		6.63	□□□□□ -1.35
MSB3	YNL293W	SKN7	P38889	622 aa		6.63	□□□□□ -1.35
MSB3	YNL293W	CHL4	P38907	458 aa		6.63	□□□□□ -1.35
MSB3	YNL293W	LRO1	P40345	661 aa		6.63	□□□□□ -1.35
MSB3	YNL293W	FLX1	P40464	311 aa		6.63	□□□□□ -1.35
MSB3	YNL293W	FIG4	P42837	879 aa		6.63	□□□□□ -1.35
MSB3	YNL293W	ATG18	P43601	500 aa		6.63	□□□□□ -1.35
MSB3	YNL293W	GPI14	P47088	403 aa	Known RBP	6.63	□□□□□ -1.35
MSB3	YNL293W	GCV1	P48015	400 aa		6.63	□□□□□ -1.35
MSB3	YNL293W	STR3	P53101	465 aa	Known RBP	6.63	□□□□□ -1.35
MSB3	YNL293W	YGR273C	P53329	174 aa		6.63	□□□□□ -1.35
MSB3	YNL293W	RHO4	Q00246	291 aa		6.63	□□□□□ -1.35
MSB3	YNL293W	UGO1	Q03327	502 aa		6.63	□□□□□ -1.35
MSB3	YNL293W	YMR155W	Q03795	547 aa		6.63	□□□□□ -1.35
MSB3	YNL293W	CNL1	Q06333	122 aa		6.63	□□□□□ -1.35
MSB3	YNL293W	TCO89	Q08921	799 aa		6.63	□□□□□ -1.35
MSB3	YNL293W	HRP1	Q99383	534 aa	Known RBP	6.63	□□□□□ -1.35
MSB3	YNL293W	CYC7	P00045	113 aa		6.62	□□□□□ -1.35
MSB3	YNL293W	PEP4	P07267	405 aa	Known RBP	6.62	□□□□□ -1.35
MSB3	YNL293W	NHP6B	P11633	99 aa	Known RBP	6.62	□□□□□ -1.35
MSB3	YNL293W	MDH1	P17505	334 aa	Known RBP RIP-Chip data	6.62	□□□□□ -1.35	not detected
MSB3	YNL293W	SNF5	P18480	905 aa		6.62	□□□□□ -1.35
MSB3	YNL293W	RBK1	P25332	333 aa		6.62	□□□□□ -1.35
MSB3	YNL293W	SKG6	P32900	734 aa	Predicted RBP	6.62	□□□□□ -1.35
MSB3	YNL293W	BNA4	P38169	460 aa		6.62	□□□□□ -1.35
MSB3	YNL293W	POP8	P38208	133 aa		6.62	□□□□□ -1.35
MSB3	YNL293W	YIL152W	P40455	235 aa		6.62	□□□□□ -1.35
MSB3	YNL293W	SYS1	P41544	203 aa		6.62	□□□□□ -1.35
MSB3	YNL293W	ALK1	P43633	760 aa	Known RBP	6.62	□□□□□ -1.35
MSB3	YNL293W	CHA4	P43634	648 aa		6.62	□□□□□ -1.35
MSB3	YNL293W	TIM21	P53220	239 aa		6.62	□□□□□ -1.35
MSB3	YNL293W	GIS1	Q03833	894 aa		6.62	□□□□□ -1.35
MSB3	YNL293W	YMR315W	Q04869	349 aa	Known RBP	6.62	□□□□□ -1.35
MSB3	YNL293W	IPK1	Q06667	281 aa		6.62	□□□□□ -1.35
MSB3	YNL293W	THI72	Q08579	599 aa		6.62	□□□□□ -1.35
MSB3	YNL293W	FSF1	Q12029	327 aa	Known RBP	6.62	□□□□□ -1.35
MSB3	YNL293W	TGL5	Q12043	749 aa		6.62	□□□□□ -1.35
MSB3	YNL293W	RKI1	Q12189	258 aa		6.62	□□□□□ -1.35
MSB3	YNL293W	PST1	Q12355	444 aa		6.62	□□□□□ -1.35
MSB3	YNL293W	KCS1	Q12494	1050 aa		6.62	□□□□□ -1.35
MSB3	YNL293W	PAR32	Q12515	295 aa	Known RBP	6.62	□□□□□ -1.35
MSB3	YNL293W	YIR021W-A	Q3E739	70 aa		6.62	□□□□□ -1.35
MSB3	YNL293W	TIM9	O74700	87 aa		6.62	□□□□□ -1.35

Retrieved 100 of 5,963 RNA–protein pairs in 16.7 ms