RNA–Protein interactions for RNA: YLR182W

SWI6, Transcript of Transcription cofactor, yeastyeast

Gene SWI6, Length 2,412 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWI6YLR182W LOC1P43586 204 aaPredicted RBP1.18□□□□□ -2.22
SWI6YLR182W GCD14P46959 383 aaPredicted RBP1.18□□□□□ -2.22
SWI6YLR182W UBC13P52490 153 aa1.18□□□□□ -2.22
SWI6YLR182W YGL118CP53132 145 aa1.18□□□□□ -2.22
SWI6YLR182W YLR297WQ05899 129 aa1.18□□□□□ -2.22
SWI6YLR182W TDH2P00358 332 aaKnown RBP1.17□□□□□ -2.22
SWI6YLR182W TDH3P00359 332 aaKnown RBP RIP-Chip data1.17□□□□□ -2.22not detected
SWI6YLR182W ERD1P16151 362 aa1.17□□□□□ -2.22
SWI6YLR182W ZRT1P32804 376 aa1.17□□□□□ -2.22
SWI6YLR182W POP2P39008 433 aa1.17□□□□□ -2.22
SWI6YLR182W YJL144WP47009 104 aa1.17□□□□□ -2.22
SWI6YLR182W YGL185CP53100 379 aa1.17□□□□□ -2.22
SWI6YLR182W OSH6Q02201 448 aa1.17□□□□□ -2.22
SWI6YLR182W RTC5Q12108 567 aaKnown RBP1.17□□□□□ -2.22
SWI6YLR182W DCP1Q12517 231 aaPredicted RBP1.17□□□□□ -2.22
SWI6YLR182W RBK1P25332 333 aa1.17□□□□□ -2.22
SWI6YLR182W ITR2P30606 609 aa1.17□□□□□ -2.22
SWI6YLR182W YHR035WP38769 630 aa1.17□□□□□ -2.22
SWI6YLR182W ASP1P38986 381 aaPredicted RBP1.17□□□□□ -2.22
SWI6YLR182W SHQ1P40486 507 aaPredicted RBP1.17□□□□□ -2.22
SWI6YLR182W HIT1P46973 164 aa1.17□□□□□ -2.22
SWI6YLR182W ASG7P46993 209 aa1.17□□□□□ -2.22
SWI6YLR182W PNC1P53184 216 aaKnown RBP1.17□□□□□ -2.22
SWI6YLR182W YPL113CQ02961 396 aa1.17□□□□□ -2.22
SWI6YLR182W APC9Q12107 265 aa1.17□□□□□ -2.22
SWI6YLR182W YPL245WQ12179 454 aaKnown RBP1.17□□□□□ -2.22
SWI6YLR182W PET18P25362 215 aa1.16□□□□□ -2.22
SWI6YLR182W ATG15P25641 520 aa1.16□□□□□ -2.22
SWI6YLR182W CTM1P38818 585 aa1.16□□□□□ -2.22
SWI6YLR182W MNN9P39107 395 aaKnown RBP1.16□□□□□ -2.22
SWI6YLR182W YIR035CP40579 254 aa1.16□□□□□ -2.22
SWI6YLR182W YPT32P51996 222 aaKnown RBP1.16□□□□□ -2.22
SWI6YLR182W TPN1P53099 579 aa1.16□□□□□ -2.22
SWI6YLR182W YGR266WP53326 701 aa1.16□□□□□ -2.22
SWI6YLR182W DIA1P54005 336 aa1.16□□□□□ -2.22
SWI6YLR182W PEX30Q06169 523 aa1.16□□□□□ -2.22
SWI6YLR182W YPL278CQ08990 100 aa1.16□□□□□ -2.22
SWI6YLR182W SGT2Q12118 346 aaKnown RBP1.16□□□□□ -2.22
SWI6YLR182W YOR114WQ12219 294 aa1.16□□□□□ -2.22
SWI6YLR182W UTP23Q12339 254 aaKnown RBP1.16□□□□□ -2.22
SWI6YLR182W HPR1P17629 752 aaKnown RBP1.16□□□□□ -2.22
SWI6YLR182W INO2P26798 304 aa1.16□□□□□ -2.22
SWI6YLR182W ALK2P32789 676 aaPredicted RBP1.16□□□□□ -2.22
SWI6YLR182W END3P39013 349 aa1.16□□□□□ -2.22
SWI6YLR182W MIC19P43594 170 aa1.16□□□□□ -2.22
SWI6YLR182W PIR5P46999 287 aa1.16□□□□□ -2.22
SWI6YLR182W VTI1Q04338 217 aa1.16□□□□□ -2.22
SWI6YLR182W MGR3Q04472 501 aa1.16□□□□□ -2.22
SWI6YLR182W ATG5Q12380 294 aa1.16□□□□□ -2.22
SWI6YLR182W BEM2P39960 2167 aaKnown RBP1.16□□□□□ -2.22
SWI6YLR182W RAD7P06779 565 aa1.15□□□□□ -2.23
SWI6YLR182W ECM14P38836 430 aa1.15□□□□□ -2.23
SWI6YLR182W AVT7P40501 490 aa1.15□□□□□ -2.23
SWI6YLR182W RRG8Q06109 277 aa1.15□□□□□ -2.23
SWI6YLR182W MDY2Q12285 212 aa1.15□□□□□ -2.23
SWI6YLR182W LAG2Q92325 660 aa1.15□□□□□ -2.23
SWI6YLR182W GAL7P08431 366 aa1.15□□□□□ -2.23
SWI6YLR182W GPI12P23797 304 aa1.15□□□□□ -2.23
SWI6YLR182W VPH2P32341 215 aa1.15□□□□□ -2.23
SWI6YLR182W EDC2P40023 145 aaPredicted RBP1.15□□□□□ -2.23
SWI6YLR182W YIL054WP40524 105 aa1.15□□□□□ -2.23
SWI6YLR182W SAM4Q08985 325 aaKnown RBP1.15□□□□□ -2.23
SWI6YLR182W YPR063CQ12160 140 aa1.15□□□□□ -2.23
SWI6YLR182W YPR1Q12458 312 aa1.15□□□□□ -2.23
SWI6YLR182W ATP6P00854 259 aa1.14□□□□□ -2.23
SWI6YLR182W RPP0P05317 312 aaKnown RBP1.14□□□□□ -2.23
SWI6YLR182W KRE1P17260 313 aa1.14□□□□□ -2.23
SWI6YLR182W RPL16BP26785 198 aaKnown RBP1.14□□□□□ -2.23
SWI6YLR182W CDC13P32797 924 aaKnown RBP1.14□□□□□ -2.23
SWI6YLR182W TKL2P33315 681 aa1.14□□□□□ -2.23
SWI6YLR182W TPO5P36029 618 aa1.14□□□□□ -2.23
SWI6YLR182W ATG12P38316 186 aa1.14□□□□□ -2.23
SWI6YLR182W VPS45P38932 577 aa1.14□□□□□ -2.23
SWI6YLR182W YIL012WP40551 113 aa1.14□□□□□ -2.23
SWI6YLR182W SYS1P41544 203 aa1.14□□□□□ -2.23
SWI6YLR182W YBL112CQ3E7Y4 105 aa1.14□□□□□ -2.23
SWI6YLR182W MEK1P24719 497 aaPredicted RBP1.14□□□□□ -2.23
SWI6YLR182W YHL044WP38727 235 aa1.14□□□□□ -2.23
SWI6YLR182W PCL7P40186 285 aa1.14□□□□□ -2.23
SWI6YLR182W YFL064CP43540 174 aa1.14□□□□□ -2.23
SWI6YLR182W FMP33P46998 180 aa1.14□□□□□ -2.23
SWI6YLR182W VOA1P53262 265 aa1.14□□□□□ -2.23
SWI6YLR182W SPO19Q03029 223 aa1.14□□□□□ -2.23
SWI6YLR182W DTD1Q07648 150 aaKnown RBP1.14□□□□□ -2.23
SWI6YLR182W AGC1Q12482 902 aa1.14□□□□□ -2.23
SWI6YLR182W PET494P07390 489 aaPredicted RBP1.13□□□□□ -2.23
SWI6YLR182W GCD2P12754 651 aaPredicted RBP1.13□□□□□ -2.23
SWI6YLR182W RPL5P26321 297 aaKnown RBP1.13□□□□□ -2.23
SWI6YLR182W MIG1P27705 504 aa1.13□□□□□ -2.23
SWI6YLR182W AEP1P32493 518 aa1.13□□□□□ -2.23
SWI6YLR182W SPT4P32914 102 aaPredicted RBP1.13□□□□□ -2.23
SWI6YLR182W RPC37P36121 282 aa1.13□□□□□ -2.23
SWI6YLR182W RRF1P38771 230 aa1.13□□□□□ -2.23
SWI6YLR182W MED6P38782 295 aa1.13□□□□□ -2.23
SWI6YLR182W SER33P40510 469 aa1.13□□□□□ -2.23
SWI6YLR182W YGL088WP53151 121 aa1.13□□□□□ -2.23
SWI6YLR182W CLP1Q08685 445 aaPredicted RBP1.13□□□□□ -2.23
SWI6YLR182W FEX1Q08913 375 aa1.13□□□□□ -2.23
SWI6YLR182W FEX2Q08991 375 aa1.13□□□□□ -2.23
SWI6YLR182W TFS1P14306 219 aa1.13□□□□□ -2.23
Retrieved 100 of 5,963 RNA–protein pairs in 126 ms