RNA–Protein interactions for RNA: YDL020C

RPN4, Transcript of Transcription factor that stimulates expression of proteasome genes, yeastyeast

Gene RPN4, Length 1,596 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN4YDL020C YLR419WQ06698 1435 aaKnown RBP3.06□□□□□ -1.92
RPN4YDL020C TY1B-HO13535 1793 aa3.05□□□□□ -1.92
RPN4YDL020C TY1B-DR5P0C2I2 1755 aa3.05□□□□□ -1.92
RPN4YDL020C TY1B-DR6P0C2I3 1755 aa3.05□□□□□ -1.92
RPN4YDL020C TY1B-LR2P0C2I5 1755 aa3.05□□□□□ -1.92
RPN4YDL020C TY1B-LR3P0C2I6 1755 aaKnown RBP3.05□□□□□ -1.92
RPN4YDL020C TY1B-PR1P0C2I9 1755 aaKnown RBP3.05□□□□□ -1.92
RPN4YDL020C TY1B-PR2P0C2J0 1756 aa3.05□□□□□ -1.92
RPN4YDL020C TY1B-PR3P0C2J1 1755 aaKnown RBP3.05□□□□□ -1.92
RPN4YDL020C TY1B-JR1P47098 1755 aa3.05□□□□□ -1.92
RPN4YDL020C TY1B-ML2Q03434 1755 aaKnown RBP3.05□□□□□ -1.92
RPN4YDL020C TY1B-ER1Q03612 1755 aa3.05□□□□□ -1.92
RPN4YDL020C TY1B-ML1Q04711 1755 aaKnown RBP3.05□□□□□ -1.92
RPN4YDL020C TY1B-GR2Q12269 1755 aa3.05□□□□□ -1.92
RPN4YDL020C TY1B-OLQ12273 1755 aa3.05□□□□□ -1.92
RPN4YDL020C TY1B-PLQ12414 1755 aaKnown RBP3.05□□□□□ -1.92
RPN4YDL020C PDR5P33302 1511 aaKnown RBP3.05□□□□□ -1.92
RPN4YDL020C PET8P38921 284 aa3.05□□□□□ -1.92
RPN4YDL020C SOP4P39543 234 aaPredicted RBP3.05□□□□□ -1.92
RPN4YDL020C YGL185CP53100 379 aa3.05□□□□□ -1.92
RPN4YDL020C MIM1Q08176 113 aa3.05□□□□□ -1.92
RPN4YDL020C YOL029CQ08187 201 aa3.05□□□□□ -1.92
RPN4YDL020C YDR018CQ12185 396 aa3.05□□□□□ -1.92
RPN4YDL020C TIR4Q12218 487 aaPredicted RBP3.05□□□□□ -1.92
RPN4YDL020C YOL085CQ99345 113 aa3.05□□□□□ -1.92
RPN4YDL020C GPI12P23797 304 aa3.04□□□□□ -1.92
RPN4YDL020C CYM1P32898 989 aa3.04□□□□□ -1.92
RPN4YDL020C EBP2P36049 427 aaKnown RBP3.04□□□□□ -1.92
RPN4YDL020C SWD2P36104 329 aaPredicted RBP3.04□□□□□ -1.92
RPN4YDL020C VPS45P38932 577 aa3.04□□□□□ -1.92
RPN4YDL020C YFL012WP43580 148 aa3.04□□□□□ -1.92
RPN4YDL020C SDS23P53172 527 aa3.04□□□□□ -1.92
RPN4YDL020C YAL067W-AQ8TGK6 75 aa3.04□□□□□ -1.92
RPN4YDL020C IZH4Q99393 312 aa3.04□□□□□ -1.92
RPN4YDL020C CAT8P39113 1433 aa3.04□□□□□ -1.92
RPN4YDL020C IRC20Q06554 1556 aa3.04□□□□□ -1.92
RPN4YDL020C GCN2P15442 1659 aa3.04□□□□□ -1.92
RPN4YDL020C MRPL20P22354 195 aaPredicted RBP3.04□□□□□ -1.92
RPN4YDL020C PPQ1P32945 549 aa3.04□□□□□ -1.92
RPN4YDL020C MCH2P36032 473 aa3.04□□□□□ -1.92
RPN4YDL020C CTM1P38818 585 aa3.04□□□□□ -1.92
RPN4YDL020C PIN3Q06449 215 aa3.04□□□□□ -1.92
RPN4YDL020C BSC6Q08280 497 aa3.04□□□□□ -1.92
RPN4YDL020C TY1B-BRQ12193 1756 aa3.04□□□□□ -1.92
RPN4YDL020C TY1B-GR3Q12316 1755 aa3.04□□□□□ -1.92
RPN4YDL020C TY1B-ORQ92393 1755 aa3.04□□□□□ -1.92
RPN4YDL020C GEA2P39993 1459 aaKnown RBP3.03□□□□□ -1.92
RPN4YDL020C NOP1P15646 327 aaKnown RBP3.03□□□□□ -1.92
RPN4YDL020C MEK1P24719 497 aaPredicted RBP3.03□□□□□ -1.92
RPN4YDL020C CSM1P25651 190 aa3.03□□□□□ -1.92
RPN4YDL020C RPL16BP26785 198 aaKnown RBP3.03□□□□□ -1.92
RPN4YDL020C INO2P26798 304 aa3.03□□□□□ -1.92
RPN4YDL020C YKL187CP34231 750 aa3.03□□□□□ -1.92
RPN4YDL020C YKL070WP36087 169 aa3.03□□□□□ -1.92
RPN4YDL020C RTT105P40063 208 aa3.03□□□□□ -1.92
RPN4YDL020C SLM1P40485 686 aa3.03□□□□□ -1.92
RPN4YDL020C GTO1P48239 356 aa3.03□□□□□ -1.92
RPN4YDL020C YNL260CP53846 198 aa3.03□□□□□ -1.92
RPN4YDL020C YNL050CP53952 270 aa3.03□□□□□ -1.92
RPN4YDL020C INP1Q03694 420 aa3.03□□□□□ -1.92
RPN4YDL020C INP2Q03824 705 aa3.03□□□□□ -1.92
RPN4YDL020C YPL245WQ12179 454 aaKnown RBP3.03□□□□□ -1.92
RPN4YDL020C BI3Q9ZZW7 517 aa3.03□□□□□ -1.92
RPN4YDL020C RPS19AP07280 144 aaKnown RBP3.02□□□□□ -1.93
RPN4YDL020C RPS19BP07281 144 aaPredicted RBP3.02□□□□□ -1.93
RPN4YDL020C RPL31AP0C2H8 113 aaKnown RBP3.02□□□□□ -1.93
RPN4YDL020C RFT1P38206 574 aaPredicted RBP3.02□□□□□ -1.93
RPN4YDL020C YPC1P38298 316 aa3.02□□□□□ -1.93
RPN4YDL020C KEL2P50090 882 aa3.02□□□□□ -1.93
RPN4YDL020C SWC4P53201 476 aa3.02□□□□□ -1.93
RPN4YDL020C FMP48P53233 369 aa3.02□□□□□ -1.93
RPN4YDL020C YNR066CP53752 436 aa3.02□□□□□ -1.93
RPN4YDL020C YMR244WQ04018 355 aa3.02□□□□□ -1.93
RPN4YDL020C ECM11Q04110 302 aa3.02□□□□□ -1.93
RPN4YDL020C BCP1Q06338 283 aa3.02□□□□□ -1.93
RPN4YDL020C TY1B-JR2P47100 1755 aaKnown RBP3.01□□□□□ -1.93
RPN4YDL020C TY1B-ER2Q03619 1755 aa3.01□□□□□ -1.93
RPN4YDL020C TY1B-MR1Q04214 1755 aa3.01□□□□□ -1.93
RPN4YDL020C TY1B-MR2Q04670 1755 aaKnown RBP3.01□□□□□ -1.93
RPN4YDL020C TY1B-LR1Q12088 1755 aaKnown RBP3.01□□□□□ -1.93
RPN4YDL020C TY1B-NL1Q12112 1755 aa3.01□□□□□ -1.93
RPN4YDL020C TY1B-GR1Q12141 1755 aa3.01□□□□□ -1.93
RPN4YDL020C TY1B-BLQ12490 1755 aa3.01□□□□□ -1.93
RPN4YDL020C OM45P16547 393 aa3.01□□□□□ -1.93
RPN4YDL020C DBP7P36120 742 aaKnown RBP3.01□□□□□ -1.93
RPN4YDL020C HIS2P38635 335 aa3.01□□□□□ -1.93
RPN4YDL020C PEX18P38855 283 aa3.01□□□□□ -1.93
RPN4YDL020C YER184CP39961 794 aa3.01□□□□□ -1.93
RPN4YDL020C UBC13P52490 153 aa3.01□□□□□ -1.93
RPN4YDL020C MND1P53102 219 aa3.01□□□□□ -1.93
RPN4YDL020C UTP15Q04305 513 aaKnown RBP3.01□□□□□ -1.93
RPN4YDL020C VTI1Q04338 217 aa3.01□□□□□ -1.93
RPN4YDL020C ERP3Q12403 225 aa3.01□□□□□ -1.93
RPN4YDL020C TDH3P00359 332 aaKnown RBP RIP-Chip data3□□□□□ -1.93not detected
RPN4YDL020C RRG9P40156 214 aa3□□□□□ -1.93
RPN4YDL020C GDS1P41913 522 aa3□□□□□ -1.93
RPN4YDL020C AGP3P43548 558 aa3□□□□□ -1.93
RPN4YDL020C FLC3P53121 802 aa3□□□□□ -1.93
RPN4YDL020C YGR067CP53243 804 aa3□□□□□ -1.93
RPN4YDL020C YPL077CQ02831 240 aa3□□□□□ -1.93
Retrieved 100 of 5,963 RNA–protein pairs in 60.4 ms