RNA–Protein interactions for RNA: YAR002W

NUP60, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeast

Gene NUP60, Length 1,620 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NUP60	YAR002W	PFA5	Q03289	374 aa		3.11	□□□□□ -1.91
NUP60	YAR002W	SEC13	Q04491	297 aa	Known RBP	3.11	□□□□□ -1.91
NUP60	YAR002W	RRN11	Q04712	507 aa		3.11	□□□□□ -1.91
NUP60	YAR002W	RGC1	Q06108	1083 aa	Known RBP	3.11	□□□□□ -1.91
NUP60	YAR002W	MLC2	Q06580	163 aa		3.11	□□□□□ -1.91
NUP60	YAR002W	YPR091C	Q06833	770 aa		3.11	□□□□□ -1.91
NUP60	YAR002W	RKM1	Q08961	583 aa	Predicted RBP	3.11	□□□□□ -1.91
NUP60	YAR002W	APC2	Q12440	853 aa		3.11	□□□□□ -1.91
NUP60	YAR002W	SIR2	P06700	562 aa		3.1	□□□□□ -1.91
NUP60	YAR002W	PDE2	P06776	526 aa		3.1	□□□□□ -1.91
NUP60	YAR002W	YGL041W-A	P0C5N3	154 aa		3.1	□□□□□ -1.91
NUP60	YAR002W	PHO80	P20052	293 aa		3.1	□□□□□ -1.91
NUP60	YAR002W	DBF2	P22204	572 aa		3.1	□□□□□ -1.91
NUP60	YAR002W	PRE7	P23724	241 aa	Known RBP	3.1	□□□□□ -1.91
NUP60	YAR002W	PRE4	P30657	266 aa		3.1	□□□□□ -1.91
NUP60	YAR002W	VPS51	P36116	164 aa		3.1	□□□□□ -1.91
NUP60	YAR002W	MOH1	P38191	138 aa		3.1	□□□□□ -1.91
NUP60	YAR002W	SMK1	P41808	388 aa		3.1	□□□□□ -1.91
NUP60	YAR002W	IDS2	P46958	469 aa		3.1	□□□□□ -1.91
NUP60	YAR002W	MDV1	P47025	714 aa		3.1	□□□□□ -1.91
NUP60	YAR002W	IRC18	P47056	224 aa		3.1	□□□□□ -1.91
NUP60	YAR002W	YGL101W	P53144	215 aa		3.1	□□□□□ -1.91
NUP60	YAR002W	IMO32	P53219	342 aa		3.1	□□□□□ -1.91
NUP60	YAR002W	TPC1	P53257	314 aa		3.1	□□□□□ -1.91
NUP60	YAR002W	SLI1	P53304	468 aa		3.1	□□□□□ -1.91
NUP60	YAR002W	RRN9	P53437	365 aa		3.1	□□□□□ -1.91
NUP60	YAR002W	ATG4	P53867	494 aa		3.1	□□□□□ -1.91
NUP60	YAR002W	PGA1	P53896	198 aa		3.1	□□□□□ -1.91
NUP60	YAR002W	YAT1	P80235	687 aa		3.1	□□□□□ -1.91
NUP60	YAR002W	TDA1	Q03533	586 aa		3.1	□□□□□ -1.91
NUP60	YAR002W	PLM2	Q04383	521 aa		3.1	□□□□□ -1.91
NUP60	YAR002W	SMA2	Q04658	369 aa		3.1	□□□□□ -1.91
NUP60	YAR002W	ORM2	Q06144	216 aa		3.1	□□□□□ -1.91
NUP60	YAR002W	GPN3	Q06543	272 aa		3.1	□□□□□ -1.91
NUP60	YAR002W	YPR172W	Q06608	200 aa		3.1	□□□□□ -1.91
NUP60	YAR002W	IPK1	Q06667	281 aa		3.1	□□□□□ -1.91
NUP60	YAR002W	RRG7	Q08774	242 aa	Predicted RBP	3.1	□□□□□ -1.91
NUP60	YAR002W	YOR289W	Q12012	251 aa	Predicted RBP	3.1	□□□□□ -1.91
NUP60	YAR002W	YDR061W	Q12298	539 aa		3.1	□□□□□ -1.91
NUP60	YAR002W	YOL114C	Q12322	202 aa		3.1	□□□□□ -1.91
NUP60	YAR002W	RTN2	Q12443	393 aa		3.1	□□□□□ -1.91
NUP60	YAR002W	SFG1	Q12507	346 aa		3.1	□□□□□ -1.91
NUP60	YAR002W	DET1	Q99288	334 aa	Known RBP	3.1	□□□□□ -1.91
NUP60	YAR002W	SEC12	P11655	471 aa		3.09	□□□□□ -1.91
NUP60	YAR002W	HOP1	P20050	605 aa		3.09	□□□□□ -1.91
NUP60	YAR002W	AHC2	P25649	128 aa		3.09	□□□□□ -1.91
NUP60	YAR002W	CLG1	P35190	452 aa		3.09	□□□□□ -1.91
NUP60	YAR002W	YBR137W	P38276	179 aa		3.09	□□□□□ -1.91
NUP60	YAR002W	ANS1	P38832	159 aa		3.09	□□□□□ -1.91
NUP60	YAR002W	YKE4	P40544	346 aa		3.09	□□□□□ -1.91
NUP60	YAR002W	CIN1	P40987	1014 aa		3.09	□□□□□ -1.91
NUP60	YAR002W	MDE1	P47095	244 aa		3.09	□□□□□ -1.91
NUP60	YAR002W	YGL235W	P53071	178 aa		3.09	□□□□□ -1.91
NUP60	YAR002W	TPN1	P53099	579 aa		3.09	□□□□□ -1.91
NUP60	YAR002W	ORM1	P53224	222 aa		3.09	□□□□□ -1.91
NUP60	YAR002W	ERG13	P54839	491 aa	Known RBP	3.09	□□□□□ -1.91
NUP60	YAR002W	SMX3	P54999	86 aa	Predicted RBP	3.09	□□□□□ -1.91
NUP60	YAR002W	MRPL13	Q02204	264 aa		3.09	□□□□□ -1.91
NUP60	YAR002W	DML1	Q03652	475 aa		3.09	□□□□□ -1.91
NUP60	YAR002W	INP1	Q03694	420 aa		3.09	□□□□□ -1.91
NUP60	YAR002W	SPC19	Q03954	165 aa		3.09	□□□□□ -1.91
NUP60	YAR002W	HLR1	Q04429	423 aa		3.09	□□□□□ -1.91
NUP60	YAR002W	YMR315W	Q04869	349 aa	Known RBP	3.09	□□□□□ -1.91
NUP60	YAR002W	STP3	Q05937	343 aa		3.09	□□□□□ -1.91
NUP60	YAR002W	BUR2	Q05949	395 aa		3.09	□□□□□ -1.91
NUP60	YAR002W	BRX1	Q08235	291 aa	Known RBP	3.09	□□□□□ -1.91
NUP60	YAR002W	YOR365C	Q08844	703 aa		3.09	□□□□□ -1.91
NUP60	YAR002W	YPL199C	Q08954	240 aa		3.09	□□□□□ -1.91
NUP60	YAR002W	HSP42	Q12329	375 aa		3.09	□□□□□ -1.91
NUP60	YAR002W	SCM3	Q12334	223 aa		3.09	□□□□□ -1.91
NUP60	YAR002W	GAL4	P04386	881 aa		3.08	□□□□□ -1.92
NUP60	YAR002W	RPL6B	P05739	176 aa	Known RBP	3.08	□□□□□ -1.92
NUP60	YAR002W	ERD2	P18414	219 aa		3.08	□□□□□ -1.92
NUP60	YAR002W	RPA135	P22138	1203 aa	Known RBP	3.08	□□□□□ -1.92
NUP60	YAR002W	EXG1	P23776	448 aa	Known RBP	3.08	□□□□□ -1.92
NUP60	YAR002W	SNC1	P31109	117 aa		3.08	□□□□□ -1.92
NUP60	YAR002W	HOM6	P31116	359 aa	Known RBP	3.08	□□□□□ -1.92
NUP60	YAR002W	YEF1	P32622	495 aa		3.08	□□□□□ -1.92
NUP60	YAR002W	MDL1	P33310	695 aa		3.08	□□□□□ -1.92
NUP60	YAR002W	ECT1	P33412	323 aa		3.08	□□□□□ -1.92
NUP60	YAR002W	SDS22	P36047	338 aa		3.08	□□□□□ -1.92
NUP60	YAR002W	DTR1	P38125	572 aa		3.08	□□□□□ -1.92
NUP60	YAR002W	THI2	P38141	450 aa		3.08	□□□□□ -1.92
NUP60	YAR002W	PAU24	P38155	120 aa		3.08	□□□□□ -1.92
NUP60	YAR002W	EXO84	P38261	753 aa		3.08	□□□□□ -1.92
NUP60	YAR002W	VMA22	P38784	181 aa		3.08	□□□□□ -1.92
NUP60	YAR002W	RTT105	P40063	208 aa		3.08	□□□□□ -1.92
NUP60	YAR002W	YIL166C	P40445	542 aa		3.08	□□□□□ -1.92
NUP60	YAR002W	ICE2	P40499	491 aa		3.08	□□□□□ -1.92
NUP60	YAR002W	FET5	P43561	622 aa		3.08	□□□□□ -1.92
NUP60	YAR002W	ALB1	P47019	175 aa	Predicted RBP	3.08	□□□□□ -1.92
NUP60	YAR002W	DIE2	P50076	525 aa		3.08	□□□□□ -1.92
NUP60	YAR002W	ERV29	P53337	310 aa		3.08	□□□□□ -1.92
NUP60	YAR002W	PAU12	P53343	120 aa		3.08	□□□□□ -1.92
NUP60	YAR002W	MSS11	Q03825	758 aa		3.08	□□□□□ -1.92
NUP60	YAR002W	SNO4	Q04902	237 aa		3.08	□□□□□ -1.92
NUP60	YAR002W	SNT309	Q06091	175 aa	Predicted RBP	3.08	□□□□□ -1.92
NUP60	YAR002W	PHO92	Q06390	306 aa		3.08	□□□□□ -1.92
NUP60	YAR002W	YPR127W	Q06494	345 aa		3.08	□□□□□ -1.92
NUP60	YAR002W	YPR174C	Q06616	221 aa	Predicted RBP	3.08	□□□□□ -1.92

Retrieved 100 of 5,963 RNA–protein pairs in 50.7 ms