RNA–Protein interactions for RNA: ENST00000616973.4

NR1H3-235, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1H3, Length 1,919 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-235ENST00000616973 U2AF1L4Q8WU68 220 aaKnown RBP17.06■□□□□ 0.32
NR1H3-235ENST00000616973 LMBR1Q8WVP7 490 aa17.06■□□□□ 0.32
NR1H3-235ENST00000616973 TELO2Q9Y4R8 837 aa17.06■□□□□ 0.32
NR1H3-235ENST00000616973 SYNGAP1Q96PV0 1343 aa17.06■□□□□ 0.32
NR1H3-235ENST00000616973 NCANO14594 1321 aa17.06■□□□□ 0.32
NR1H3-235ENST00000616973 IRF6O14896 467 aa17.06■□□□□ 0.32
NR1H3-235ENST00000616973 FTCDO95954 541 aa17.06■□□□□ 0.32
NR1H3-235ENST00000616973 EDNRBP24530 442 aa17.06■□□□□ 0.32
NR1H3-235ENST00000616973 CXCR5P32302 372 aa17.06■□□□□ 0.32
NR1H3-235ENST00000616973 GCLMP48507 274 aa17.06■□□□□ 0.32
NR1H3-235ENST00000616973 MXI1P50539 228 aa17.06■□□□□ 0.32
NR1H3-235ENST00000616973 CNTN2Q02246 1040 aa17.06■□□□□ 0.32
NR1H3-235ENST00000616973 BRDTQ58F21 947 aaPredicted RBP17.06■□□□□ 0.32
NR1H3-235ENST00000616973 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.06■□□□□ 0.32
NR1H3-235ENST00000616973 ZSWIM2Q8NEG5 633 aa17.06■□□□□ 0.32
NR1H3-235ENST00000616973 IFT74Q96LB3 600 aa17.06■□□□□ 0.32
NR1H3-235ENST00000616973 MFSD14AQ96MC6 490 aa17.06■□□□□ 0.32
NR1H3-235ENST00000616973 TMEM117Q9H0C3 514 aa17.06■□□□□ 0.32
NR1H3-235ENST00000616973 SPON1Q9HCB6 807 aa17.06■□□□□ 0.32
NR1H3-235ENST00000616973 ARHGAP28Q9P2N2 729 aa17.06■□□□□ 0.32
NR1H3-235ENST00000616973 COQ4Q9Y3A0 265 aa17.06■□□□□ 0.32
NR1H3-235ENST00000616973 IGKV6D-21A0A0A0MT36 114 aa17.05■□□□□ 0.32
NR1H3-235ENST00000616973 ADM5C9JUS6 153 aa17.05■□□□□ 0.32
NR1H3-235ENST00000616973 CXCL11O14625 94 aa17.05■□□□□ 0.32
NR1H3-235ENST00000616973 TMEM253P0C7T8 217 aa17.05■□□□□ 0.32
NR1H3-235ENST00000616973 GARTP22102 1010 aa17.05■□□□□ 0.32
NR1H3-235ENST00000616973 GTF2H1P32780 548 aa17.05■□□□□ 0.32
NR1H3-235ENST00000616973 SLC39A4Q6P5W5 647 aa17.05■□□□□ 0.32
NR1H3-235ENST00000616973 SLFN11Q7Z7L1 901 aa17.05■□□□□ 0.32
NR1H3-235ENST00000616973 TPCN2Q8NHX9 752 aa17.05■□□□□ 0.32
NR1H3-235ENST00000616973 PARD3BQ8TEW8 1205 aa17.05■□□□□ 0.32
NR1H3-235ENST00000616973 UPF1Q92900 1129 aaKnown RBP eCLIP17.05■□□□□ 0.32
NR1H3-235ENST00000616973 SPATC1LQ9H0A9 340 aa17.05■□□□□ 0.32
NR1H3-235ENST00000616973 ZNF302Q9NR11 478 aa17.05■□□□□ 0.32
NR1H3-235ENST00000616973 FOXN3O00409 490 aaPredicted RBP17.04■□□□□ 0.32
NR1H3-235ENST00000616973 GALCP54803 685 aa17.04■□□□□ 0.32
NR1H3-235ENST00000616973 FAM193AP78312 1265 aa17.04■□□□□ 0.32
NR1H3-235ENST00000616973 ARHGAP44Q17R89 818 aa17.04■□□□□ 0.32
NR1H3-235ENST00000616973 GLE1Q53GS7 698 aaKnown RBP17.04■□□□□ 0.32
NR1H3-235ENST00000616973 USP37Q86T82 979 aa17.04■□□□□ 0.32
NR1H3-235ENST00000616973 ERO1BQ86YB8 467 aa17.04■□□□□ 0.32
NR1H3-235ENST00000616973 CBWD2Q8IUF1 395 aa17.04■□□□□ 0.32
NR1H3-235ENST00000616973 GLYCTKQ8IVS8 523 aa17.04■□□□□ 0.32
NR1H3-235ENST00000616973 CNKSR2Q8WXI2 1034 aa17.04■□□□□ 0.32
NR1H3-235ENST00000616973 KIFC3Q9BVG8 833 aa17.04■□□□□ 0.32
NR1H3-235ENST00000616973 UBE2TQ9NPD8 197 aaPredicted RBP17.04■□□□□ 0.32
NR1H3-235ENST00000616973 ADGRA3Q8IWK6 1321 aa17.04■□□□□ 0.32
NR1H3-235ENST00000616973 GOLGA8IPA6NC78 632 aa17.04■□□□□ 0.32
NR1H3-235ENST00000616973 GOLGA8JA6NMD2 632 aa17.04■□□□□ 0.32
NR1H3-235ENST00000616973 OATP04181 439 aa17.04■□□□□ 0.32
NR1H3-235ENST00000616973 TNFAIP3P21580 790 aa17.04■□□□□ 0.32
NR1H3-235ENST00000616973 NOP2P46087 812 aaKnown RBP17.04■□□□□ 0.32
NR1H3-235ENST00000616973 SOX10P56693 466 aa17.04■□□□□ 0.32
NR1H3-235ENST00000616973 SP4Q02446 784 aa17.04■□□□□ 0.32
NR1H3-235ENST00000616973 SMC1AQ14683 1233 aaKnown RBP17.04■□□□□ 0.32
NR1H3-235ENST00000616973 RPS6KA1Q15418 735 aa17.04■□□□□ 0.32
NR1H3-235ENST00000616973 GADL1Q6ZQY3 521 aa17.04■□□□□ 0.32
NR1H3-235ENST00000616973 CYFIP1Q7L576 1253 aa17.04■□□□□ 0.32
NR1H3-235ENST00000616973 ARHGEF19Q8IW93 802 aa17.04■□□□□ 0.32
NR1H3-235ENST00000616973 SYCE1Q8N0S2 351 aa17.04■□□□□ 0.32
NR1H3-235ENST00000616973 PBKQ96KB5 322 aa17.04■□□□□ 0.32
NR1H3-235ENST00000616973 PSMB7Q99436 277 aa17.04■□□□□ 0.32
NR1H3-235ENST00000616973 NIFKQ9BYG3 293 aaKnown RBP17.04■□□□□ 0.32
NR1H3-235ENST00000616973 POLR3FQ9H1D9 316 aaPredicted RBP17.04■□□□□ 0.32
NR1H3-235ENST00000616973 TMEM8AQ9HCN3 771 aa17.04■□□□□ 0.32
NR1H3-235ENST00000616973 RNF181Q9P0P0 153 aa17.04■□□□□ 0.32
NR1H3-235ENST00000616973 ZNFX1Q9P2E3 1918 aaKnown RBP17.03■□□□□ 0.32
NR1H3-235ENST00000616973 KIF4AO95239 1232 aa17.03■□□□□ 0.32
NR1H3-235ENST00000616973 ATP4AP20648 1035 aa17.03■□□□□ 0.32
NR1H3-235ENST00000616973 FSTL1Q12841 308 aa17.03■□□□□ 0.32
NR1H3-235ENST00000616973 EMC2Q15006 297 aa17.03■□□□□ 0.32
NR1H3-235ENST00000616973 KRT39Q6A163 491 aa17.03■□□□□ 0.32
NR1H3-235ENST00000616973 DLK2Q6UY11 383 aa17.03■□□□□ 0.32
NR1H3-235ENST00000616973 CCNI2Q6ZMN8 369 aaPredicted RBP17.03■□□□□ 0.32
NR1H3-235ENST00000616973 ANKRD13AQ8IZ07 590 aa17.03■□□□□ 0.32
NR1H3-235ENST00000616973 GPD1LQ8N335 351 aa17.03■□□□□ 0.32
NR1H3-235ENST00000616973 TAF4BQ92750 862 aa17.03■□□□□ 0.32
NR1H3-235ENST00000616973 AGPAT1Q99943 283 aa17.03■□□□□ 0.32
NR1H3-235ENST00000616973 DHX33Q9H6R0 707 aaKnown RBP17.03■□□□□ 0.32
NR1H3-235ENST00000616973 RNF216Q9NWF9 866 aaPredicted RBP17.03■□□□□ 0.32
NR1H3-235ENST00000616973 KCNH4Q9UQ05 1017 aa17.03■□□□□ 0.32
NR1H3-235ENST00000616973 SOWAHBA6NEL2 793 aa17.02■□□□□ 0.32
NR1H3-235ENST00000616973 SPDYE5A6NIY4 337 aa17.02■□□□□ 0.32
NR1H3-235ENST00000616973 KIAA0391O15091 583 aaKnown RBP17.02■□□□□ 0.32
NR1H3-235ENST00000616973 TGFB3P10600 412 aa17.02■□□□□ 0.32
NR1H3-235ENST00000616973 GPC3P51654 580 aa17.02■□□□□ 0.32
NR1H3-235ENST00000616973 IRX3P78415 501 aaPredicted RBP17.02■□□□□ 0.32
NR1H3-235ENST00000616973 CYP24A1Q07973 514 aa17.02■□□□□ 0.32
NR1H3-235ENST00000616973 CASP8Q14790 479 aa17.02■□□□□ 0.32
NR1H3-235ENST00000616973 MTERF2Q49AM1 385 aa17.02■□□□□ 0.32
NR1H3-235ENST00000616973 SEPT14Q6ZU15 432 aa17.02■□□□□ 0.32
NR1H3-235ENST00000616973 TAS1R3Q7RTX0 852 aa17.02■□□□□ 0.32
NR1H3-235ENST00000616973 RFFLQ8WZ73 363 aa17.02■□□□□ 0.32
NR1H3-235ENST00000616973 SAAL1Q96ER3 474 aa17.02■□□□□ 0.32
NR1H3-235ENST00000616973 CALR3Q96L12 384 aaKnown RBP17.02■□□□□ 0.32
NR1H3-235ENST00000616973 FHDC1Q9C0D6 1143 aaPredicted RBP17.02■□□□□ 0.32
NR1H3-235ENST00000616973 VIPAS39Q9H9C1 493 aa17.02■□□□□ 0.32
NR1H3-235ENST00000616973 ELP3Q9H9T3 547 aa17.02■□□□□ 0.32
NR1H3-235ENST00000616973 STXBP5LQ9Y2K9 1186 aa17.02■□□□□ 0.32
NR1H3-235ENST00000616973 LRRIQ3A6PVS8 624 aaPredicted RBP17.02■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms