RNA–Protein interactions for RNA: ENST00000594965.1

GTF2F1-204, Transcript of general transcription factor IIF subunit 1, humanhuman

TSL 3

Gene GTF2F1, Length 762 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-204ENST00000594965 SYT1P21579 422 aa24.72■■□□□ 1.55
GTF2F1-204ENST00000594965 LTBRP36941 435 aa24.72■■□□□ 1.55
GTF2F1-204ENST00000594965 AFF1P51825 1210 aaKnown RBP24.72■■□□□ 1.55
GTF2F1-204ENST00000594965 ERVFC1P60507 584 aa24.72■■□□□ 1.55
GTF2F1-204ENST00000594965 PLCB3Q01970 1234 aa24.72■■□□□ 1.55
GTF2F1-204ENST00000594965 CTC1Q2NKJ3 1217 aa24.72■■□□□ 1.55
GTF2F1-204ENST00000594965 NOTUMQ6P988 496 aa24.72■■□□□ 1.55
GTF2F1-204ENST00000594965 CCDC51Q96ER9 411 aa24.72■■□□□ 1.55
GTF2F1-204ENST00000594965 ZNF558Q96NG5 402 aa24.72■■□□□ 1.55
GTF2F1-204ENST00000594965 CSRNP2Q9H175 543 aa24.72■■□□□ 1.55
GTF2F1-204ENST00000594965 FOXD4L1Q9NU39 408 aa24.72■■□□□ 1.55
GTF2F1-204ENST00000594965 TBC1D13Q9NVG8 400 aa24.72■■□□□ 1.55
GTF2F1-204ENST00000594965 KCNA5P22460 613 aa24.71■■□□□ 1.55
GTF2F1-204ENST00000594965 LEXMQ3ZCV2 418 aa24.71■■□□□ 1.55
GTF2F1-204ENST00000594965 NOMO2Q5JPE7 1267 aa24.71■■□□□ 1.55
GTF2F1-204ENST00000594965 GLB1LQ6UWU2 654 aa24.71■■□□□ 1.55
GTF2F1-204ENST00000594965 PPP4R3CPQ6ZMV5 832 aa24.71■■□□□ 1.55
GTF2F1-204ENST00000594965 SLC39A11Q8N1S5 342 aa24.71■■□□□ 1.55
GTF2F1-204ENST00000594965 GADD45GIP1Q8TAE8 222 aaPredicted RBP24.71■■□□□ 1.55
GTF2F1-204ENST00000594965 RSPH1Q8WYR4 309 aa24.71■■□□□ 1.55
GTF2F1-204ENST00000594965 MRPS27Q92552 414 aaKnown RBP24.71■■□□□ 1.55
GTF2F1-204ENST00000594965 SNX21Q969T3 373 aa24.71■■□□□ 1.55
GTF2F1-204ENST00000594965 RNF39Q9H2S5 420 aa24.71■■□□□ 1.55
GTF2F1-204ENST00000594965 FZD8Q9H461 694 aa24.71■■□□□ 1.55
GTF2F1-204ENST00000594965 NRDE2Q9H7Z3 1164 aa24.71■■□□□ 1.55
GTF2F1-204ENST00000594965 DNM3Q9UQ16 869 aa24.71■■□□□ 1.55
GTF2F1-204ENST00000594965 INPP5FQ9Y2H2 1132 aa24.71■■□□□ 1.55
GTF2F1-204ENST00000594965 IPPQ9Y573 584 aa24.71■■□□□ 1.55
GTF2F1-204ENST00000594965 A0A1B0GUA9 196 aa24.7■■□□□ 1.54
GTF2F1-204ENST00000594965 TTLL13PA6NNM8 815 aa24.7■■□□□ 1.54
GTF2F1-204ENST00000594965 FSCN2O14926 492 aa24.7■■□□□ 1.54
GTF2F1-204ENST00000594965 B4GALT3O60512 393 aa24.7■■□□□ 1.54
GTF2F1-204ENST00000594965 BCAR1P56945 870 aa24.7■■□□□ 1.54
GTF2F1-204ENST00000594965 FAM187BQ17R55 369 aa24.7■■□□□ 1.54
GTF2F1-204ENST00000594965 CDR2LQ86X02 465 aaPredicted RBP24.7■■□□□ 1.54
GTF2F1-204ENST00000594965 CNNM3Q8NE01 707 aa24.7■■□□□ 1.54
GTF2F1-204ENST00000594965 NECAB3Q96P71 396 aaPredicted RBP24.7■■□□□ 1.54
GTF2F1-204ENST00000594965 RSAD1Q9HA92 442 aa24.7■■□□□ 1.54
GTF2F1-204ENST00000594965 TLR9Q9NR96 1032 aa24.7■■□□□ 1.54
GTF2F1-204ENST00000594965 CLDND1Q9NY35 253 aa24.7■■□□□ 1.54
GTF2F1-204ENST00000594965 LZTS1Q9Y250 596 aa24.7■■□□□ 1.54
GTF2F1-204ENST00000594965 CNTNAP2Q9UHC6 1331 aa24.69■■□□□ 1.54
GTF2F1-204ENST00000594965 NT5C1B-RDH14C9J2C7 533 aa24.69■■□□□ 1.54
GTF2F1-204ENST00000594965 EDN1P05305 212 aa24.69■■□□□ 1.54
GTF2F1-204ENST00000594965 NAMPTP43490 491 aa24.69■■□□□ 1.54
GTF2F1-204ENST00000594965 GRIN1Q05586 938 aa24.69■■□□□ 1.54
GTF2F1-204ENST00000594965 DLX2Q07687 328 aaPredicted RBP24.69■■□□□ 1.54
GTF2F1-204ENST00000594965 NCBP1Q09161 790 aaKnown RBP24.69■■□□□ 1.54
GTF2F1-204ENST00000594965 RESTQ13127 1097 aa24.69■■□□□ 1.54
GTF2F1-204ENST00000594965 SF3A1Q15459 793 aaKnown RBP24.69■■□□□ 1.54
GTF2F1-204ENST00000594965 RINT1Q6NUQ1 792 aa24.69■■□□□ 1.54
GTF2F1-204ENST00000594965 ZBTB8OSQ8IWT0 167 aa24.69■■□□□ 1.54
GTF2F1-204ENST00000594965 RUSC1Q9BVN2 902 aa24.69■■□□□ 1.54
GTF2F1-204ENST00000594965 CCDC113Q9H0I3 377 aa24.69■■□□□ 1.54
GTF2F1-204ENST00000594965 IGFLR1Q9H665 355 aa24.69■■□□□ 1.54
GTF2F1-204ENST00000594965 PRMT7Q9NVM4 692 aaPredicted RBP24.69■■□□□ 1.54
GTF2F1-204ENST00000594965 SPG21Q9NZD8 308 aa24.69■■□□□ 1.54
GTF2F1-204ENST00000594965 HES2Q9Y543 173 aa24.69■■□□□ 1.54
GTF2F1-204ENST00000594965 H3BQ06 376 aaPredicted RBP24.68■■□□□ 1.54
GTF2F1-204ENST00000594965 LINC01565O15544 149 aa24.68■■□□□ 1.54
GTF2F1-204ENST00000594965 ITGA4P13612 1032 aa24.68■■□□□ 1.54
GTF2F1-204ENST00000594965 PPM1AP35813 382 aa24.68■■□□□ 1.54
GTF2F1-204ENST00000594965 ZRSR1Q15695 479 aaKnown RBP24.68■■□□□ 1.54
GTF2F1-204ENST00000594965 C1orf186Q6ZWK4 172 aa24.68■■□□□ 1.54
GTF2F1-204ENST00000594965 TMEM173Q86WV6 379 aaPredicted RBP24.68■■□□□ 1.54
GTF2F1-204ENST00000594965 ZNF280BQ86YH2 543 aa24.68■■□□□ 1.54
GTF2F1-204ENST00000594965 DAW1Q8N136 415 aa24.68■■□□□ 1.54
GTF2F1-204ENST00000594965 PRIMPOLQ96LW4 560 aa24.68■■□□□ 1.54
GTF2F1-204ENST00000594965 UHRF1Q96T88 793 aaPredicted RBP24.68■■□□□ 1.54
GTF2F1-204ENST00000594965 KIFC3Q9BVG8 833 aa24.68■■□□□ 1.54
GTF2F1-204ENST00000594965 C2orf40Q9H1Z8 148 aa24.68■■□□□ 1.54
GTF2F1-204ENST00000594965 INPPL1O15357 1258 aa24.67■■□□□ 1.54
GTF2F1-204ENST00000594965 NCK2O43639 380 aa24.67■■□□□ 1.54
GTF2F1-204ENST00000594965 ZC3H11AO75152 810 aaKnown RBP eCLIP24.67■■□□□ 1.54
GTF2F1-204ENST00000594965 DDHD2O94830 711 aa24.67■■□□□ 1.54
GTF2F1-204ENST00000594965 GALTP07902 379 aa24.67■■□□□ 1.54
GTF2F1-204ENST00000594965 MAPK7Q13164 816 aa24.67■■□□□ 1.54
GTF2F1-204ENST00000594965 ADAM15Q13444 863 aa24.67■■□□□ 1.54
GTF2F1-204ENST00000594965 PPP2R5AQ15172 486 aa24.67■■□□□ 1.54
GTF2F1-204ENST00000594965 TMEM119Q4V9L6 283 aa24.67■■□□□ 1.54
GTF2F1-204ENST00000594965 FAM173BQ6P4H8 233 aa24.67■■□□□ 1.54
GTF2F1-204ENST00000594965 MICAL1Q8TDZ2 1067 aa24.67■■□□□ 1.54
GTF2F1-204ENST00000594965 KIFAP3Q92845 792 aa24.67■■□□□ 1.54
GTF2F1-204ENST00000594965 PLIN2Q99541 437 aa24.67■■□□□ 1.54
GTF2F1-204ENST00000594965 NXF3Q9H4D5 531 aaKnown RBP24.67■■□□□ 1.54
GTF2F1-204ENST00000594965 DNAJB4Q9UDY4 337 aa24.67■■□□□ 1.54
GTF2F1-204ENST00000594965 MTMR6Q9Y217 621 aa24.67■■□□□ 1.54
GTF2F1-204ENST00000594965 USP20Q9Y2K6 914 aa24.67■■□□□ 1.54
GTF2F1-204ENST00000594965 TRIP11Q15643 1979 aa24.66■■□□□ 1.54
GTF2F1-204ENST00000594965 HIP1RO75146 1068 aa24.66■■□□□ 1.54
GTF2F1-204ENST00000594965 TBX10O75333 385 aa24.66■■□□□ 1.54
GTF2F1-204ENST00000594965 NPTXRO95502 500 aa24.66■■□□□ 1.54
GTF2F1-204ENST00000594965 BMP15O95972 392 aa24.66■■□□□ 1.54
GTF2F1-204ENST00000594965 NRIP1P48552 1158 aa24.66■■□□□ 1.54
GTF2F1-204ENST00000594965 ALDH7A1P49419 539 aaKnown RBP24.66■■□□□ 1.54
GTF2F1-204ENST00000594965 PTPAQ15257 358 aa24.66■■□□□ 1.54
GTF2F1-204ENST00000594965 SLC27A1Q6PCB7 646 aa24.66■■□□□ 1.54
GTF2F1-204ENST00000594965 EP400NLQ6ZTU2 488 aa24.66■■□□□ 1.54
GTF2F1-204ENST00000594965 CABP7Q86V35 215 aa24.66■■□□□ 1.54
GTF2F1-204ENST00000594965 DEPTORQ8TB45 409 aa24.66■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 94.3 ms