RNA–Protein interactions for RNA: ENST00000578178.5

PPP4R1-208, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 468 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-208ENST00000578178 NOMO2Q5JPE7 1267 aa12.1□□□□□ -0.47
PPP4R1-208ENST00000578178 AGMOQ6ZNB7 445 aa12.1□□□□□ -0.47
PPP4R1-208ENST00000578178 MRPL10Q7Z7H8 261 aaKnown RBP12.1□□□□□ -0.47
PPP4R1-208ENST00000578178 CNNM3Q8NE01 707 aa12.1□□□□□ -0.47
PPP4R1-208ENST00000578178 URGCPQ8TCY9 931 aa12.1□□□□□ -0.47
PPP4R1-208ENST00000578178 BSNDQ8WZ55 320 aa12.1□□□□□ -0.47
PPP4R1-208ENST00000578178 KIFAP3Q92845 792 aa12.1□□□□□ -0.47
PPP4R1-208ENST00000578178 CPB2Q96IY4 423 aa12.1□□□□□ -0.47
PPP4R1-208ENST00000578178 PRIMPOLQ96LW4 560 aa12.1□□□□□ -0.47
PPP4R1-208ENST00000578178 MMTAG2Q9BU76 263 aaKnown RBP12.1□□□□□ -0.47
PPP4R1-208ENST00000578178 CSRNP2Q9H175 543 aa12.1□□□□□ -0.47
PPP4R1-208ENST00000578178 C2orf40Q9H1Z8 148 aa12.1□□□□□ -0.47
PPP4R1-208ENST00000578178 RSAD1Q9HA92 442 aa12.1□□□□□ -0.47
PPP4R1-208ENST00000578178 PRMT7Q9NVM4 692 aaPredicted RBP12.1□□□□□ -0.47
PPP4R1-208ENST00000578178 DNM3Q9UQ16 869 aa12.1□□□□□ -0.47
PPP4R1-208ENST00000578178 LZTS1Q9Y250 596 aa12.1□□□□□ -0.47
PPP4R1-208ENST00000578178 INPP5FQ9Y2H2 1132 aa12.1□□□□□ -0.47
PPP4R1-208ENST00000578178 CARNS1A5YM72 827 aa12.09□□□□□ -0.47
PPP4R1-208ENST00000578178 E9PMD0 336 aa12.09□□□□□ -0.47
PPP4R1-208ENST00000578178 B4GALT5O43286 388 aa12.09□□□□□ -0.47
PPP4R1-208ENST00000578178 ZC3H11AO75152 810 aaKnown RBP eCLIP12.09□□□□□ -0.47
PPP4R1-208ENST00000578178 OFD1O75665 1012 aa12.09□□□□□ -0.47
PPP4R1-208ENST00000578178 BMP1P13497 986 aa12.09□□□□□ -0.47
PPP4R1-208ENST00000578178 NCLP19338 710 aaKnown RBP12.09□□□□□ -0.47
PPP4R1-208ENST00000578178 PBX3P40426 434 aa12.09□□□□□ -0.47
PPP4R1-208ENST00000578178 RNASELQ05823 741 aaKnown RBP12.09□□□□□ -0.47
PPP4R1-208ENST00000578178 LEXMQ3ZCV2 418 aa12.09□□□□□ -0.47
PPP4R1-208ENST00000578178 HYIQ5T013 277 aa12.09□□□□□ -0.47
PPP4R1-208ENST00000578178 SLC39A11Q8N1S5 342 aa12.09□□□□□ -0.47
PPP4R1-208ENST00000578178 KCTD17Q8N5Z5 321 aa12.09□□□□□ -0.47
PPP4R1-208ENST00000578178 DEPTORQ8TB45 409 aa12.09□□□□□ -0.47
PPP4R1-208ENST00000578178 MRPS27Q92552 414 aaKnown RBP12.09□□□□□ -0.47
PPP4R1-208ENST00000578178 SNX21Q969T3 373 aa12.09□□□□□ -0.47
PPP4R1-208ENST00000578178 IFT74Q96LB3 600 aa12.09□□□□□ -0.47
PPP4R1-208ENST00000578178 AK8Q96MA6 479 aa12.09□□□□□ -0.47
PPP4R1-208ENST00000578178 UHRF1Q96T88 793 aaPredicted RBP12.09□□□□□ -0.47
PPP4R1-208ENST00000578178 EIF2AQ9BY44 585 aaKnown RBP12.09□□□□□ -0.47
PPP4R1-208ENST00000578178 TRIM6Q9C030 488 aaPredicted RBP12.09□□□□□ -0.47
PPP4R1-208ENST00000578178 NT5C3AQ9H0P0 336 aa12.09□□□□□ -0.47
PPP4R1-208ENST00000578178 RTN4Q9NQC3 1192 aaKnown RBP12.09□□□□□ -0.47
PPP4R1-208ENST00000578178 TBC1D13Q9NVG8 400 aa12.09□□□□□ -0.47
PPP4R1-208ENST00000578178 CLDND1Q9NY35 253 aa12.09□□□□□ -0.47
PPP4R1-208ENST00000578178 SPG21Q9NZD8 308 aa12.09□□□□□ -0.47
PPP4R1-208ENST00000578178 IPPQ9Y573 584 aa12.09□□□□□ -0.47
PPP4R1-208ENST00000578178 TDRD15B5MCY1 1934 aaKnown RBP12.09□□□□□ -0.47
PPP4R1-208ENST00000578178 MYH15Q9Y2K3 1946 aa12.09□□□□□ -0.47
PPP4R1-208ENST00000578178 MYH11P35749 1972 aa12.09□□□□□ -0.47
PPP4R1-208ENST00000578178 ZMYM2Q9UBW7 1377 aa12.08□□□□□ -0.48
PPP4R1-208ENST00000578178 FSCN2O14926 492 aa12.08□□□□□ -0.48
PPP4R1-208ENST00000578178 SLC26A4O43511 780 aa12.08□□□□□ -0.48
PPP4R1-208ENST00000578178 PRKCBP05771 671 aa12.08□□□□□ -0.48
PPP4R1-208ENST00000578178 ITGA4P13612 1032 aa12.08□□□□□ -0.48
PPP4R1-208ENST00000578178 SYT1P21579 422 aa12.08□□□□□ -0.48
PPP4R1-208ENST00000578178 ALDH7A1P49419 539 aaKnown RBP12.08□□□□□ -0.48
PPP4R1-208ENST00000578178 BCAR1P56945 870 aa12.08□□□□□ -0.48
PPP4R1-208ENST00000578178 KRT17Q04695 432 aa12.08□□□□□ -0.48
PPP4R1-208ENST00000578178 RESTQ13127 1097 aa12.08□□□□□ -0.48
PPP4R1-208ENST00000578178 SF3A1Q15459 793 aaKnown RBP12.08□□□□□ -0.48
PPP4R1-208ENST00000578178 ZRSR1Q15695 479 aaKnown RBP12.08□□□□□ -0.48
PPP4R1-208ENST00000578178 MAPK6Q16659 721 aa12.08□□□□□ -0.48
PPP4R1-208ENST00000578178 FAM187BQ17R55 369 aa12.08□□□□□ -0.48
PPP4R1-208ENST00000578178 CTC1Q2NKJ3 1217 aa12.08□□□□□ -0.48
PPP4R1-208ENST00000578178 PDE12Q6L8Q7 609 aaKnown RBP12.08□□□□□ -0.48
PPP4R1-208ENST00000578178 SLC27A1Q6PCB7 646 aa12.08□□□□□ -0.48
PPP4R1-208ENST00000578178 EP400NLQ6ZTU2 488 aa12.08□□□□□ -0.48
PPP4R1-208ENST00000578178 KCNK18Q7Z418 384 aa12.08□□□□□ -0.48
PPP4R1-208ENST00000578178 ADGRD2Q7Z7M1 963 aa12.08□□□□□ -0.48
PPP4R1-208ENST00000578178 HACE1Q8IYU2 909 aa12.08□□□□□ -0.48
PPP4R1-208ENST00000578178 SMG8Q8ND04 991 aaKnown RBP12.08□□□□□ -0.48
PPP4R1-208ENST00000578178 CDK5RAP3Q96JB5 506 aa12.08□□□□□ -0.48
PPP4R1-208ENST00000578178 PNMA5Q96PV4 448 aa12.08□□□□□ -0.48
PPP4R1-208ENST00000578178 TCF25Q9BQ70 676 aa12.08□□□□□ -0.48
PPP4R1-208ENST00000578178 RUSC1Q9BVN2 902 aa12.08□□□□□ -0.48
PPP4R1-208ENST00000578178 CCDC113Q9H0I3 377 aa12.08□□□□□ -0.48
PPP4R1-208ENST00000578178 FZD8Q9H461 694 aa12.08□□□□□ -0.48
PPP4R1-208ENST00000578178 NRDE2Q9H7Z3 1164 aa12.08□□□□□ -0.48
PPP4R1-208ENST00000578178 UBN1Q9NPG3 1134 aa12.08□□□□□ -0.48
PPP4R1-208ENST00000578178 ENTPD7Q9NQZ7 604 aa12.08□□□□□ -0.48
PPP4R1-208ENST00000578178 FOXD4L1Q9NU39 408 aa12.08□□□□□ -0.48
PPP4R1-208ENST00000578178 PUF60Q9UHX1 559 aaKnown RBP12.08□□□□□ -0.48
PPP4R1-208ENST00000578178 PCDHGC5Q9Y5F6 944 aa12.08□□□□□ -0.48
PPP4R1-208ENST00000578178 A0A1B0GUA9 196 aa12.07□□□□□ -0.48
PPP4R1-208ENST00000578178 FSD2A1L4K1 749 aa12.07□□□□□ -0.48
PPP4R1-208ENST00000578178 H3BQ06 376 aaPredicted RBP12.07□□□□□ -0.48
PPP4R1-208ENST00000578178 N4BP3O15049 544 aa12.07□□□□□ -0.48
PPP4R1-208ENST00000578178 INPPL1O15357 1258 aa12.07□□□□□ -0.48
PPP4R1-208ENST00000578178 TBX10O75333 385 aa12.07□□□□□ -0.48
PPP4R1-208ENST00000578178 NPTXRO95502 500 aa12.07□□□□□ -0.48
PPP4R1-208ENST00000578178 GTF2F1P35269 517 aaKnown RBP eCLIP12.07□□□□□ -0.488e-7■■□□□ 14.3
PPP4R1-208ENST00000578178 MLH1P40692 756 aa12.07□□□□□ -0.48
PPP4R1-208ENST00000578178 ERVFC1P60507 584 aa12.07□□□□□ -0.48
PPP4R1-208ENST00000578178 DMP1Q13316 513 aaPredicted RBP12.07□□□□□ -0.48
PPP4R1-208ENST00000578178 PRPF4BQ13523 1007 aaKnown RBP12.07□□□□□ -0.48
PPP4R1-208ENST00000578178 TMEM119Q4V9L6 283 aa12.07□□□□□ -0.48
PPP4R1-208ENST00000578178 PLPP4Q5VZY2 271 aa12.07□□□□□ -0.48
PPP4R1-208ENST00000578178 CABP7Q86V35 215 aa12.07□□□□□ -0.48
PPP4R1-208ENST00000578178 HSCBQ8IWL3 235 aa12.07□□□□□ -0.48
PPP4R1-208ENST00000578178 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.07□□□□□ -0.48
PPP4R1-208ENST00000578178 MICAL1Q8TDZ2 1067 aa12.07□□□□□ -0.48
PPP4R1-208ENST00000578178 TMEM169Q96HH4 297 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms