RNA–Protein interactions for RNA: ENST00000572365.1

SF3B3-214, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-214ENST00000572365 CLSPNQ9HAW4 1339 aa6.84□□□□□ -1.31
SF3B3-214ENST00000572365 DNAH12Q6ZR08 3092 aa6.84□□□□□ -1.31
SF3B3-214ENST00000572365 PTPDC1A2A3K4 754 aa6.84□□□□□ -1.31
SF3B3-214ENST00000572365 PSPNO60542 156 aa6.84□□□□□ -1.31
SF3B3-214ENST00000572365 GAS7O60861 476 aa6.84□□□□□ -1.31
SF3B3-214ENST00000572365 ADAM23O75077 832 aa6.84□□□□□ -1.31
SF3B3-214ENST00000572365 AMY2AP04746 511 aa6.84□□□□□ -1.31
SF3B3-214ENST00000572365 RNASE1P07998 156 aaKnown RBP6.84□□□□□ -1.31
SF3B3-214ENST00000572365 AMY2BP19961 511 aa6.84□□□□□ -1.31
SF3B3-214ENST00000572365 ERVFC1P60507 584 aa6.84□□□□□ -1.31
SF3B3-214ENST00000572365 CRHR2Q13324 411 aa6.84□□□□□ -1.31
SF3B3-214ENST00000572365 KIR3DS1Q14943 382 aa6.84□□□□□ -1.31
SF3B3-214ENST00000572365 SNX17Q15036 470 aa6.84□□□□□ -1.31
SF3B3-214ENST00000572365 TIGD5Q53EQ6 642 aa6.84□□□□□ -1.31
SF3B3-214ENST00000572365 HHIPL2Q6UWX4 724 aa6.84□□□□□ -1.31
SF3B3-214ENST00000572365 LHFPL2Q6ZUX7 228 aa6.84□□□□□ -1.31
SF3B3-214ENST00000572365 MCM10Q7L590 875 aa6.84□□□□□ -1.31
SF3B3-214ENST00000572365 OSTM1Q86WC4 334 aa6.84□□□□□ -1.31
SF3B3-214ENST00000572365 USP33Q8TEY7 942 aa6.84□□□□□ -1.31
SF3B3-214ENST00000572365 SHISA4Q96DD7 197 aa6.84□□□□□ -1.31
SF3B3-214ENST00000572365 ZNF333Q96JL9 665 aa6.84□□□□□ -1.31
SF3B3-214ENST00000572365 CLMNQ96JQ2 1002 aa6.84□□□□□ -1.31
SF3B3-214ENST00000572365 KRTAP4-8Q9BYQ9 185 aa6.84□□□□□ -1.31
SF3B3-214ENST00000572365 METTL14Q9HCE5 456 aaKnown RBP6.84□□□□□ -1.31
SF3B3-214ENST00000572365 SMURF1Q9HCE7 757 aa6.84□□□□□ -1.31
SF3B3-214ENST00000572365 SLC6A20Q9NP91 592 aa6.84□□□□□ -1.31
SF3B3-214ENST00000572365 PCMTD2Q9NV79 361 aa6.84□□□□□ -1.31
SF3B3-214ENST00000572365 APOBEC2Q9Y235 224 aaKnown RBP6.84□□□□□ -1.31
SF3B3-214ENST00000572365 ZKSCAN5Q9Y2L8 839 aa6.84□□□□□ -1.31
SF3B3-214ENST00000572365 TCRBV5S4A2TA0A5A2 114 aa6.83□□□□□ -1.32
SF3B3-214ENST00000572365 NTSR2O95665 410 aa6.83□□□□□ -1.32
SF3B3-214ENST00000572365 SNRPA1P09661 255 aaKnown RBP6.83□□□□□ -1.32
SF3B3-214ENST00000572365 GLI4P10075 376 aa6.83□□□□□ -1.32
SF3B3-214ENST00000572365 ATP2A2P16615 1042 aaKnown RBP6.83□□□□□ -1.32
SF3B3-214ENST00000572365 TACR1P25103 407 aa6.83□□□□□ -1.32
SF3B3-214ENST00000572365 ADCYAP1R1P41586 468 aa6.83□□□□□ -1.32
SF3B3-214ENST00000572365 SLC6A11P48066 632 aa6.83□□□□□ -1.32
SF3B3-214ENST00000572365 LSSP48449 732 aa6.83□□□□□ -1.32
SF3B3-214ENST00000572365 JAM2P57087 298 aa6.83□□□□□ -1.32
SF3B3-214ENST00000572365 GPSM2P81274 684 aa6.83□□□□□ -1.32
SF3B3-214ENST00000572365 CYP4F8P98187 520 aa6.83□□□□□ -1.32
SF3B3-214ENST00000572365 EXOSC10Q01780 885 aaKnown RBP6.83□□□□□ -1.32
SF3B3-214ENST00000572365 SREBF2Q12772 1141 aa6.83□□□□□ -1.32
SF3B3-214ENST00000572365 SART3Q15020 963 aaKnown RBP6.83□□□□□ -1.32
SF3B3-214ENST00000572365 BRDTQ58F21 947 aaPredicted RBP6.83□□□□□ -1.32
SF3B3-214ENST00000572365 EMC4Q5J8M3 183 aa6.83□□□□□ -1.32
SF3B3-214ENST00000572365 ARHGAP36Q6ZRI8 547 aa6.83□□□□□ -1.32
SF3B3-214ENST00000572365 TP53INP2Q8IXH6 220 aa6.83□□□□□ -1.32
SF3B3-214ENST00000572365 PHACTR3Q96KR7 559 aa6.83□□□□□ -1.32
SF3B3-214ENST00000572365 ARHGAP39Q9C0H5 1083 aa6.83□□□□□ -1.32
SF3B3-214ENST00000572365 PRO3102Q9H379 93 aa6.83□□□□□ -1.32
SF3B3-214ENST00000572365 CRTAC1Q9NQ79 661 aa6.83□□□□□ -1.32
SF3B3-214ENST00000572365 CTNND2Q9UQB3 1225 aa6.83□□□□□ -1.32
SF3B3-214ENST00000572365 LAMB4A4D0S4 1761 aa6.82□□□□□ -1.32
SF3B3-214ENST00000572365 KIF7Q2M1P5 1343 aa6.82□□□□□ -1.32
SF3B3-214ENST00000572365 NKRFO15226 690 aaKnown RBP eCLIP6.82□□□□□ -1.32
SF3B3-214ENST00000572365 BBOX1O75936 387 aa6.82□□□□□ -1.32
SF3B3-214ENST00000572365 FKBP9O95302 570 aa6.82□□□□□ -1.32
SF3B3-214ENST00000572365 ANXA1P04083 346 aa6.82□□□□□ -1.32
SF3B3-214ENST00000572365 NTRK1P04629 796 aa6.82□□□□□ -1.32
SF3B3-214ENST00000572365 COL6A2P12110 1019 aa6.82□□□□□ -1.32
SF3B3-214ENST00000572365 RAC2P15153 192 aa6.82□□□□□ -1.32
SF3B3-214ENST00000572365 PNLIPP16233 465 aa6.82□□□□□ -1.32
SF3B3-214ENST00000572365 ID4P47928 161 aa6.82□□□□□ -1.32
SF3B3-214ENST00000572365 GUCY2FP51841 1108 aa6.82□□□□□ -1.32
SF3B3-214ENST00000572365 SP3Q02447 781 aa6.82□□□□□ -1.32
SF3B3-214ENST00000572365 TCIRG1Q13488 830 aa6.82□□□□□ -1.32
SF3B3-214ENST00000572365 ZNF792Q3KQV3 632 aa6.82□□□□□ -1.32
SF3B3-214ENST00000572365 CREB3L3Q68CJ9 461 aa6.82□□□□□ -1.32
SF3B3-214ENST00000572365 FKBP9P1Q75LS8 142 aa6.82□□□□□ -1.32
SF3B3-214ENST00000572365 SPATS2Q86XZ4 545 aaKnown RBP6.82□□□□□ -1.32
SF3B3-214ENST00000572365 UHMK1Q8TAS1 419 aaKnown RBP6.82□□□□□ -1.32
SF3B3-214ENST00000572365 PIP4K2CQ8TBX8 421 aa6.82□□□□□ -1.32
SF3B3-214ENST00000572365 SH3RF2Q8TEC5 729 aa6.82□□□□□ -1.32
SF3B3-214ENST00000572365 MYLIPQ8WY64 445 aa6.82□□□□□ -1.32
SF3B3-214ENST00000572365 ERO1AQ96HE7 468 aa6.82□□□□□ -1.32
SF3B3-214ENST00000572365 PTPN18Q99952 460 aa6.82□□□□□ -1.32
SF3B3-214ENST00000572365 BOCQ9BWV1 1114 aa6.82□□□□□ -1.32
SF3B3-214ENST00000572365 VPS33BQ9H267 617 aa6.82□□□□□ -1.32
SF3B3-214ENST00000572365 SLC5A4Q9NY91 659 aa6.82□□□□□ -1.32
SF3B3-214ENST00000572365 MUC3AQ02505 3323 aa6.82□□□□□ -1.32
SF3B3-214ENST00000572365 KDM3BQ7LBC6 1761 aa6.82□□□□□ -1.32
SF3B3-214ENST00000572365 ALPK3Q96L96 1907 aa6.82□□□□□ -1.32
SF3B3-214ENST00000572365 CDHR2Q9BYE9 1310 aa6.81□□□□□ -1.32
SF3B3-214ENST00000572365 COL4A1P02462 1669 aa6.81□□□□□ -1.32
SF3B3-214ENST00000572365 MYO9BQ13459 2157 aa6.81□□□□□ -1.32
SF3B3-214ENST00000572365 SLC12A8A0AV02 714 aa6.81□□□□□ -1.32
SF3B3-214ENST00000572365 KRIT1O00522 736 aa6.81□□□□□ -1.32
SF3B3-214ENST00000572365 SRGAP3O43295 1099 aa6.81□□□□□ -1.32
SF3B3-214ENST00000572365 ZBTB48P10074 688 aaPredicted RBP6.81□□□□□ -1.32
SF3B3-214ENST00000572365 TRHRP34981 398 aaPredicted RBP6.81□□□□□ -1.32
SF3B3-214ENST00000572365 IL2P60568 153 aa6.81□□□□□ -1.32
SF3B3-214ENST00000572365 OCRLQ01968 901 aa6.81□□□□□ -1.32
SF3B3-214ENST00000572365 LRP8Q14114 963 aa6.81□□□□□ -1.32
SF3B3-214ENST00000572365 NBPF11Q86T75 865 aa6.81□□□□□ -1.32
SF3B3-214ENST00000572365 CABP7Q86V35 215 aa6.81□□□□□ -1.32
SF3B3-214ENST00000572365 PTRH1Q86Y79 214 aaKnown RBP6.81□□□□□ -1.32
SF3B3-214ENST00000572365 NOSTRINQ8IVI9 506 aa6.81□□□□□ -1.32
SF3B3-214ENST00000572365 ZNF34Q8IZ26 560 aa6.81□□□□□ -1.32
SF3B3-214ENST00000572365 NETO2Q8NC67 525 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms