RNA–Protein interactions for RNA: ENST00000564593.1

LINC00560-201, long intergenic non-protein coding RNA 560, humanhuman

TSL 1 (best) BASIC

Gene LINC00560, Length 1,599 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00560-201ENST00000564593 SARSP49591 514 aaKnown RBP6.06□□□□□ -1.44
LINC00560-201ENST00000564593 VWA3BQ502W6 1294 aa6.06□□□□□ -1.44
LINC00560-201ENST00000564593 ARHGAP29Q52LW3 1261 aa6.06□□□□□ -1.44
LINC00560-201ENST00000564593 ZNF385BQ569K4 471 aa6.06□□□□□ -1.44
LINC00560-201ENST00000564593 KLHDC10Q6PID8 442 aa6.06□□□□□ -1.44
LINC00560-201ENST00000564593 FAM180AQ6UWF9 173 aa6.06□□□□□ -1.44
LINC00560-201ENST00000564593 Q6ZUG5 572 aa6.06□□□□□ -1.44
LINC00560-201ENST00000564593 SLC35G2Q8TBE7 412 aa6.06□□□□□ -1.44
LINC00560-201ENST00000564593 SPATA25Q9BR10 227 aa6.06□□□□□ -1.44
LINC00560-201ENST00000564593 GTPBP4Q9BZE4 634 aaKnown RBP6.06□□□□□ -1.44
LINC00560-201ENST00000564593 OBP2AQ9NY56 170 aa6.06□□□□□ -1.44
LINC00560-201ENST00000564593 LIMCH1Q9UPQ0 1083 aa6.06□□□□□ -1.44
LINC00560-201ENST00000564593 VWA7Q9Y334 891 aa6.06□□□□□ -1.44
LINC00560-201ENST00000564593 CAND2O75155 1236 aa6.06□□□□□ -1.44
LINC00560-201ENST00000564593 MEOX1P50221 254 aa6.06□□□□□ -1.44
LINC00560-201ENST00000564593 SESN2P58004 480 aaPredicted RBP6.06□□□□□ -1.44
LINC00560-201ENST00000564593 CAP1Q01518 475 aa6.06□□□□□ -1.44
LINC00560-201ENST00000564593 ZNF267Q14586 743 aaPredicted RBP6.06□□□□□ -1.44
LINC00560-201ENST00000564593 TRIM68Q6AZZ1 485 aa6.06□□□□□ -1.44
LINC00560-201ENST00000564593 MCTP2Q6DN12 878 aa6.06□□□□□ -1.44
LINC00560-201ENST00000564593 SLC4A10Q6U841 1118 aa6.06□□□□□ -1.44
LINC00560-201ENST00000564593 USP45Q70EL2 814 aa6.06□□□□□ -1.44
LINC00560-201ENST00000564593 LARP4Q71RC2 724 aaKnown RBP eCLIP6.06□□□□□ -1.44
LINC00560-201ENST00000564593 CCDC146Q8IYE0 955 aa6.06□□□□□ -1.44
LINC00560-201ENST00000564593 ADGRG2Q8IZP9 1017 aa6.06□□□□□ -1.44
LINC00560-201ENST00000564593 RIN2Q8WYP3 895 aaPredicted RBP6.06□□□□□ -1.44
LINC00560-201ENST00000564593 DPF2Q92785 391 aa6.06□□□□□ -1.44
LINC00560-201ENST00000564593 GFM2Q969S9 779 aaKnown RBP6.06□□□□□ -1.44
LINC00560-201ENST00000564593 YTHDC1Q96MU7 727 aaKnown RBP6.06□□□□□ -1.44
LINC00560-201ENST00000564593 MAP3K14Q99558 947 aa6.06□□□□□ -1.44
LINC00560-201ENST00000564593 PCGF6Q9BYE7 350 aa6.06□□□□□ -1.44
LINC00560-201ENST00000564593 SLC12A5Q9H2X9 1139 aa6.06□□□□□ -1.44
LINC00560-201ENST00000564593 RBM12Q9NTZ6 932 aaKnown RBP6.06□□□□□ -1.44
LINC00560-201ENST00000564593 A0A1W2PR48 441 aa6.05□□□□□ -1.44
LINC00560-201ENST00000564593 SH3D21A4FU49 640 aa6.05□□□□□ -1.44
LINC00560-201ENST00000564593 CCDC154A6NI56 674 aa6.05□□□□□ -1.44
LINC00560-201ENST00000564593 ERC2O15083 957 aa6.05□□□□□ -1.44
LINC00560-201ENST00000564593 HTRA2O43464 458 aaPredicted RBP6.05□□□□□ -1.44
LINC00560-201ENST00000564593 GAAP10253 952 aa6.05□□□□□ -1.44
LINC00560-201ENST00000564593 WASP42768 502 aa6.05□□□□□ -1.44
LINC00560-201ENST00000564593 HLTFQ14527 1009 aaKnown RBP eCLIP6.05□□□□□ -1.44
LINC00560-201ENST00000564593 NOMO1Q15155 1222 aa6.05□□□□□ -1.44
LINC00560-201ENST00000564593 ATAT1Q5SQI0 421 aa6.05□□□□□ -1.44
LINC00560-201ENST00000564593 B3GNT9Q6UX72 402 aa6.05□□□□□ -1.44
LINC00560-201ENST00000564593 DGKHQ86XP1 1220 aa6.05□□□□□ -1.44
LINC00560-201ENST00000564593 GRAMD1CQ8IYS0 662 aa6.05□□□□□ -1.44
LINC00560-201ENST00000564593 GPR156Q8NFN8 814 aa6.05□□□□□ -1.44
LINC00560-201ENST00000564593 HPS3Q969F9 1004 aa6.05□□□□□ -1.44
LINC00560-201ENST00000564593 UIMC1Q96RL1 719 aa6.05□□□□□ -1.44
LINC00560-201ENST00000564593 CARD11Q9BXL7 1154 aa6.05□□□□□ -1.44
LINC00560-201ENST00000564593 KATNBL1Q9H079 304 aa6.05□□□□□ -1.44
LINC00560-201ENST00000564593 CD320Q9NPF0 282 aa6.05□□□□□ -1.44
LINC00560-201ENST00000564593 PRDM11Q9NQV5 511 aa6.05□□□□□ -1.44
LINC00560-201ENST00000564593 FAM184BQ9ULE4 1060 aa6.05□□□□□ -1.44
LINC00560-201ENST00000564593 IPPQ9Y573 584 aa6.05□□□□□ -1.44
LINC00560-201ENST00000564593 A0A1B0GTL3 188 aa6.04□□□□□ -1.44
LINC00560-201ENST00000564593 CCDC194A0A1B0GVG4 234 aa6.04□□□□□ -1.44
LINC00560-201ENST00000564593 FFAR3O14843 346 aa6.04□□□□□ -1.44
LINC00560-201ENST00000564593 AKR1B10O60218 316 aa6.04□□□□□ -1.44
LINC00560-201ENST00000564593 CTNND1O60716 968 aaKnown RBP6.04□□□□□ -1.44
LINC00560-201ENST00000564593 PRAMEF4O60810 478 aa6.04□□□□□ -1.44
LINC00560-201ENST00000564593 DTNBO60941 627 aa6.04□□□□□ -1.44
LINC00560-201ENST00000564593 TMEM127O75204 238 aa6.04□□□□□ -1.44
LINC00560-201ENST00000564593 KRT18P05783 430 aaKnown RBP6.04□□□□□ -1.44
LINC00560-201ENST00000564593 LTA4HP09960 611 aaKnown RBP6.04□□□□□ -1.44
LINC00560-201ENST00000564593 EDNRBP24530 442 aa6.04□□□□□ -1.44
LINC00560-201ENST00000564593 CTSSP25774 331 aa6.04□□□□□ -1.44
LINC00560-201ENST00000564593 AFF3P51826 1226 aaKnown RBP6.04□□□□□ -1.44
LINC00560-201ENST00000564593 RRADP55042 308 aa6.04□□□□□ -1.44
LINC00560-201ENST00000564593 MEF2AQ02078 507 aaPredicted RBP6.04□□□□□ -1.44
LINC00560-201ENST00000564593 PPP3CAQ08209 521 aa6.04□□□□□ -1.44
LINC00560-201ENST00000564593 ADAM15Q13444 863 aa6.04□□□□□ -1.44
LINC00560-201ENST00000564593 PCOLCEQ15113 449 aa6.04□□□□□ -1.44
LINC00560-201ENST00000564593 ABHD15Q6UXT9 468 aa6.04□□□□□ -1.44
LINC00560-201ENST00000564593 REXO1L1PQ8IX06 675 aa6.04□□□□□ -1.44
LINC00560-201ENST00000564593 UNC5BQ8IZJ1 945 aa6.04□□□□□ -1.44
LINC00560-201ENST00000564593 CARFQ8N187 725 aa6.04□□□□□ -1.44
LINC00560-201ENST00000564593 PRR18Q8N4B5 295 aa6.04□□□□□ -1.44
LINC00560-201ENST00000564593 TXNDC5Q8NBS9 432 aaKnown RBP6.04□□□□□ -1.44
LINC00560-201ENST00000564593 PIK3C3Q8NEB9 887 aa6.04□□□□□ -1.44
LINC00560-201ENST00000564593 HDAC10Q969S8 669 aa6.04□□□□□ -1.44
LINC00560-201ENST00000564593 DACT3Q96B18 629 aaPredicted RBP6.04□□□□□ -1.44
LINC00560-201ENST00000564593 MVB12AQ96EY5 273 aa6.04□□□□□ -1.44
LINC00560-201ENST00000564593 AJUBAQ96IF1 538 aa6.04□□□□□ -1.44
LINC00560-201ENST00000564593 TAAR9Q96RI9 348 aa6.04□□□□□ -1.44
LINC00560-201ENST00000564593 BARX1Q9HBU1 254 aaPredicted RBP6.04□□□□□ -1.44
LINC00560-201ENST00000564593 ZDHHC9Q9Y397 364 aa6.04□□□□□ -1.44
LINC00560-201ENST00000564593 RPTORQ8N122 1335 aa6.04□□□□□ -1.44
LINC00560-201ENST00000564593 MRE11P49959 708 aa6.03□□□□□ -1.44
LINC00560-201ENST00000564593 FXR1P51114 621 aaKnown RBP eCLIP6.03□□□□□ -1.44
LINC00560-201ENST00000564593 LINC00310P59036 64 aa6.03□□□□□ -1.44
LINC00560-201ENST00000564593 MGAT2Q10469 447 aa6.03□□□□□ -1.44
LINC00560-201ENST00000564593 UBE3CQ15386 1083 aa6.03□□□□□ -1.44
LINC00560-201ENST00000564593 KCNA10Q16322 511 aa6.03□□□□□ -1.44
LINC00560-201ENST00000564593 CCSAPQ6IQ19 270 aaPredicted RBP6.03□□□□□ -1.44
LINC00560-201ENST00000564593 MIGA2Q7L4E1 593 aa6.03□□□□□ -1.44
LINC00560-201ENST00000564593 CCAR1Q8IX12 1150 aaKnown RBP6.03□□□□□ -1.44
LINC00560-201ENST00000564593 RUNDC1Q96C34 613 aa6.03□□□□□ -1.44
LINC00560-201ENST00000564593 KIAA1683Q9H0B3 1180 aa6.03□□□□□ -1.44
LINC00560-201ENST00000564593 FAM171A2A8MVW0 826 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms