RNA–Protein interactions for RNA: ENST00000563207.1

USB1-208, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 5

Gene USB1, Length 464 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-208ENST00000563207 SRPRBQ9Y5M8 271 aaKnown RBP17.41■□□□□ 0.38
USB1-208ENST00000563207 VWA3AA6NCI4 1184 aa17.4■□□□□ 0.38
USB1-208ENST00000563207 PPP6R2O75170 966 aa17.4■□□□□ 0.38
USB1-208ENST00000563207 SRGAP2CP0DJJ0 459 aa17.4■□□□□ 0.38
USB1-208ENST00000563207 XRCC6P12956 609 aaKnown RBP eCLIP17.4■□□□□ 0.38
USB1-208ENST00000563207 PHKA2P46019 1235 aa17.4■□□□□ 0.38
USB1-208ENST00000563207 DNM2P50570 870 aa17.4■□□□□ 0.38
USB1-208ENST00000563207 AFF1P51825 1210 aaKnown RBP17.4■□□□□ 0.38
USB1-208ENST00000563207 KRT85P78386 507 aa17.4■□□□□ 0.38
USB1-208ENST00000563207 PLCB3Q01970 1234 aa17.4■□□□□ 0.38
USB1-208ENST00000563207 CEBPZQ03701 1054 aaKnown RBP17.4■□□□□ 0.38
USB1-208ENST00000563207 UBE3AQ05086 875 aa17.4■□□□□ 0.38
USB1-208ENST00000563207 STK38Q15208 465 aa17.4■□□□□ 0.38
USB1-208ENST00000563207 IL17AQ16552 155 aa17.4■□□□□ 0.38
USB1-208ENST00000563207 KRT79Q5XKE5 535 aa17.4■□□□□ 0.38
USB1-208ENST00000563207 LLGL2Q6P1M3 1020 aa17.4■□□□□ 0.38
USB1-208ENST00000563207 OTUD6AQ7L8S5 288 aa17.4■□□□□ 0.38
USB1-208ENST00000563207 EXOC8Q8IYI6 725 aa17.4■□□□□ 0.38
USB1-208ENST00000563207 ABI1Q8IZP0 508 aa17.4■□□□□ 0.38
USB1-208ENST00000563207 LRRC43Q8N309 656 aa17.4■□□□□ 0.38
USB1-208ENST00000563207 SMRP1Q8NCR6 262 aa17.4■□□□□ 0.38
USB1-208ENST00000563207 KCNG4Q8TDN1 519 aa17.4■□□□□ 0.38
USB1-208ENST00000563207 PRPF31Q8WWY3 499 aaKnown RBP17.4■□□□□ 0.38
USB1-208ENST00000563207 CEP170P1Q96L14 293 aa17.4■□□□□ 0.38
USB1-208ENST00000563207 ZNF558Q96NG5 402 aa17.4■□□□□ 0.38
USB1-208ENST00000563207 TCF25Q9BQ70 676 aa17.4■□□□□ 0.38
USB1-208ENST00000563207 PRKAG3Q9UGI9 489 aa17.4■□□□□ 0.38
USB1-208ENST00000563207 MUTYHQ9UIF7 546 aa17.4■□□□□ 0.38
USB1-208ENST00000563207 PIN4Q9Y237 131 aaKnown RBP17.4■□□□□ 0.38
USB1-208ENST00000563207 USP15Q9Y4E8 981 aaPredicted RBP17.4■□□□□ 0.38
USB1-208ENST00000563207 WDFY4Q6ZS81 3184 aa17.39■□□□□ 0.37
USB1-208ENST00000563207 SPTLC2O15270 562 aa17.39■□□□□ 0.37
USB1-208ENST00000563207 COASYQ13057 564 aa17.39■□□□□ 0.37
USB1-208ENST00000563207 KCNC3Q14003 757 aa17.39■□□□□ 0.37
USB1-208ENST00000563207 TWF2Q6IBS0 349 aaKnown RBP17.39■□□□□ 0.37
USB1-208ENST00000563207 RNF135Q8IUD6 432 aa17.39■□□□□ 0.37
USB1-208ENST00000563207 TPH2Q8IWU9 490 aa17.39■□□□□ 0.37
USB1-208ENST00000563207 SLC39A11Q8N1S5 342 aa17.39■□□□□ 0.37
USB1-208ENST00000563207 FEZF2Q8TBJ5 459 aa17.39■□□□□ 0.37
USB1-208ENST00000563207 BCL7CQ8WUZ0 217 aaPredicted RBP17.39■□□□□ 0.37
USB1-208ENST00000563207 AUTS2Q8WXX7 1259 aa17.39■□□□□ 0.37
USB1-208ENST00000563207 DHX33Q9H6R0 707 aaKnown RBP17.39■□□□□ 0.37
USB1-208ENST00000563207 RNF216Q9NWF9 866 aaPredicted RBP17.39■□□□□ 0.37
USB1-208ENST00000563207 SPG21Q9NZD8 308 aa17.39■□□□□ 0.37
USB1-208ENST00000563207 CHMP5Q9NZZ3 219 aa17.39■□□□□ 0.37
USB1-208ENST00000563207 TFIP11Q9UBB9 837 aaKnown RBP17.39■□□□□ 0.37
USB1-208ENST00000563207 FAM50BQ9Y247 325 aa17.39■□□□□ 0.37
USB1-208ENST00000563207 COL4A3BPQ9Y5P4 624 aa17.39■□□□□ 0.37
USB1-208ENST00000563207 HOXA2O43364 376 aa17.38■□□□□ 0.37
USB1-208ENST00000563207 DCXO43602 365 aa17.38■□□□□ 0.37
USB1-208ENST00000563207 EOMESO95936 686 aa17.38■□□□□ 0.37
USB1-208ENST00000563207 SPATA31C1P0DKV0 1188 aa17.38■□□□□ 0.37
USB1-208ENST00000563207 YWHABP31946 246 aaKnown RBP17.38■□□□□ 0.37
USB1-208ENST00000563207 POLGP54098 1239 aaPredicted RBP17.38■□□□□ 0.37
USB1-208ENST00000563207 BCAR1P56945 870 aa17.38■□□□□ 0.37
USB1-208ENST00000563207 DNM1Q05193 864 aaKnown RBP17.38■□□□□ 0.37
USB1-208ENST00000563207 FAM43BQ6ZT52 329 aaPredicted RBP17.38■□□□□ 0.37
USB1-208ENST00000563207 CATSPER4Q7RTX7 472 aa17.38■□□□□ 0.37
USB1-208ENST00000563207 ZNF410Q86VK4 478 aa17.38■□□□□ 0.37
USB1-208ENST00000563207 CATSPER3Q86XQ3 398 aa17.38■□□□□ 0.37
USB1-208ENST00000563207 ZNF710Q8N1W2 664 aa17.38■□□□□ 0.37
USB1-208ENST00000563207 KRI1Q8N9T8 703 aaKnown RBP17.38■□□□□ 0.37
USB1-208ENST00000563207 PPP2R3CQ969Q6 453 aa17.38■□□□□ 0.37
USB1-208ENST00000563207 NACC1Q96RE7 527 aa17.38■□□□□ 0.37
USB1-208ENST00000563207 SCAND2PQ9GZW5 306 aaPredicted RBP17.38■□□□□ 0.37
USB1-208ENST00000563207 XPNPEP1Q9NQW7 623 aa17.38■□□□□ 0.37
USB1-208ENST00000563207 ENTPD7Q9NQZ7 604 aa17.38■□□□□ 0.37
USB1-208ENST00000563207 ANKEF1Q9NU02 776 aa17.38■□□□□ 0.37
USB1-208ENST00000563207 FAM105AQ9NUU6 356 aa17.38■□□□□ 0.37
USB1-208ENST00000563207 DNAJB4Q9UDY4 337 aa17.38■□□□□ 0.37
USB1-208ENST00000563207 FBXO2Q9UK22 296 aaPredicted RBP17.38■□□□□ 0.37
USB1-208ENST00000563207 RCOR1Q9UKL0 485 aa17.38■□□□□ 0.37
USB1-208ENST00000563207 INPP5FQ9Y2H2 1132 aa17.38■□□□□ 0.37
USB1-208ENST00000563207 OFD1O75665 1012 aa17.37■□□□□ 0.37
USB1-208ENST00000563207 SFPQP23246 707 aaKnown RBP eCLIP17.37■□□□□ 0.37
USB1-208ENST00000563207 MARCKSP29966 332 aaPredicted RBP17.37■□□□□ 0.37
USB1-208ENST00000563207 HOXA11P31270 313 aaPredicted RBP17.37■□□□□ 0.37
USB1-208ENST00000563207 CCT6AP40227 531 aaKnown RBP17.37■□□□□ 0.37
USB1-208ENST00000563207 UBA7P41226 1012 aa17.37■□□□□ 0.37
USB1-208ENST00000563207 LAMTOR4Q0VGL1 99 aa17.37■□□□□ 0.37
USB1-208ENST00000563207 EMC2Q15006 297 aa17.37■□□□□ 0.37
USB1-208ENST00000563207 XKR9Q5GH70 373 aa17.37■□□□□ 0.37
USB1-208ENST00000563207 UBXN11Q5T124 520 aa17.37■□□□□ 0.37
USB1-208ENST00000563207 KANK3Q6NY19 840 aa17.37■□□□□ 0.37
USB1-208ENST00000563207 SYCE2Q6PIF2 218 aa17.37■□□□□ 0.37
USB1-208ENST00000563207 TMC7Q7Z402 723 aa17.37■□□□□ 0.37
USB1-208ENST00000563207 ZNF280BQ86YH2 543 aa17.37■□□□□ 0.37
USB1-208ENST00000563207 SNX29Q8TEQ0 813 aa17.37■□□□□ 0.37
USB1-208ENST00000563207 NT5C3AQ9H0P0 336 aa17.37■□□□□ 0.37
USB1-208ENST00000563207 NRDE2Q9H7Z3 1164 aa17.37■□□□□ 0.37
USB1-208ENST00000563207 CHST12Q9NRB3 414 aa17.37■□□□□ 0.37
USB1-208ENST00000563207 TBC1D13Q9NVG8 400 aa17.37■□□□□ 0.37
USB1-208ENST00000563207 DACT1Q9NYF0 836 aa17.37■□□□□ 0.37
USB1-208ENST00000563207 LZTS1Q9Y250 596 aa17.37■□□□□ 0.37
USB1-208ENST00000563207 ZC3H11AO75152 810 aaKnown RBP eCLIP17.36■□□□□ 0.37
USB1-208ENST00000563207 MED24O75448 989 aa17.36■□□□□ 0.37
USB1-208ENST00000563207 ALADP13716 330 aa17.36■□□□□ 0.37
USB1-208ENST00000563207 CSPP1Q1MSJ5 1256 aa17.36■□□□□ 0.37
USB1-208ENST00000563207 FOXD4L6Q3SYB3 417 aaPredicted RBP17.36■□□□□ 0.37
USB1-208ENST00000563207 HYIQ5T013 277 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 148.8 ms