RNA–Protein interactions for RNA: ENST00000556564.5

PTPN21-208, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN21, Length 6,166 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-208ENST00000556564 PANX2Q96RD6 677 aa18.56■□□□□ 0.56
PTPN21-208ENST00000556564 MED1Q15648 1581 aaPredicted RBP18.56■□□□□ 0.56
PTPN21-208ENST00000556564 PGRMC1O00264 195 aaKnown RBP18.56■□□□□ 0.56
PTPN21-208ENST00000556564 SLC37A4O43826 429 aa18.56■□□□□ 0.56
PTPN21-208ENST00000556564 NPEPPSP55786 919 aa18.56■□□□□ 0.56
PTPN21-208ENST00000556564 THOC5Q13769 683 aaKnown RBP18.56■□□□□ 0.56
PTPN21-208ENST00000556564 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.56■□□□□ 0.56
PTPN21-208ENST00000556564 SNX9Q9Y5X1 595 aa18.56■□□□□ 0.56
PTPN21-208ENST00000556564 MANSC4A6NHS7 340 aaPredicted RBP18.56■□□□□ 0.56
PTPN21-208ENST00000556564 EBAG9O00559 213 aa18.56■□□□□ 0.56
PTPN21-208ENST00000556564 SHMT1P34896 483 aa18.56■□□□□ 0.56
PTPN21-208ENST00000556564 ZFPM1Q8IX07 1006 aa18.56■□□□□ 0.56
PTPN21-208ENST00000556564 RIT2Q99578 217 aa18.56■□□□□ 0.56
PTPN21-208ENST00000556564 NFIBO00712 420 aa18.55■□□□□ 0.56
PTPN21-208ENST00000556564 MSH4O15457 936 aa18.55■□□□□ 0.56
PTPN21-208ENST00000556564 TPD52P55327 224 aaPredicted RBP18.55■□□□□ 0.56
PTPN21-208ENST00000556564 YAF2Q8IY57 180 aa18.55■□□□□ 0.56
PTPN21-208ENST00000556564 PDCD6IPQ8WUM4 868 aaKnown RBP18.55■□□□□ 0.56
PTPN21-208ENST00000556564 RRN3P2A6NIE6 340 aa18.55■□□□□ 0.56
PTPN21-208ENST00000556564 TRAPPC3O43617 180 aa18.55■□□□□ 0.56
PTPN21-208ENST00000556564 CALB1P05937 261 aa18.55■□□□□ 0.56
PTPN21-208ENST00000556564 TCRBV5S4A2TA0A5A2 114 aa18.55■□□□□ 0.56
PTPN21-208ENST00000556564 AP3M2P53677 418 aa18.55■□□□□ 0.56
PTPN21-208ENST00000556564 NLRP11P59045 1033 aaKnown RBP18.55■□□□□ 0.56
PTPN21-208ENST00000556564 HERVK_113P62684 666 aa18.55■□□□□ 0.56
PTPN21-208ENST00000556564 WDR72Q3MJ13 1102 aa18.55■□□□□ 0.56
PTPN21-208ENST00000556564 LRRC31Q6UY01 552 aa18.55■□□□□ 0.56
PTPN21-208ENST00000556564 DCLK2Q8N568 766 aa18.55■□□□□ 0.56
PTPN21-208ENST00000556564 PCSK1NQ9UHG2 260 aa18.55■□□□□ 0.56
PTPN21-208ENST00000556564 MOSPD1Q9UJG1 213 aa18.55■□□□□ 0.56
PTPN21-208ENST00000556564 CTDNEP1O95476 244 aa18.55■□□□□ 0.56
PTPN21-208ENST00000556564 STX2P32856 288 aa18.55■□□□□ 0.56
PTPN21-208ENST00000556564 XRRA1Q6P2D8 792 aa18.55■□□□□ 0.56
PTPN21-208ENST00000556564 FBXL13Q8NEE6 735 aa18.55■□□□□ 0.56
PTPN21-208ENST00000556564 KIFC3Q9BVG8 833 aa18.55■□□□□ 0.56
PTPN21-208ENST00000556564 MYMKA6NI61 221 aa18.55■□□□□ 0.56
PTPN21-208ENST00000556564 F5H423 210 aaPredicted RBP18.55■□□□□ 0.56
PTPN21-208ENST00000556564 HPCAL4Q9UM19 191 aa18.55■□□□□ 0.56
PTPN21-208ENST00000556564 FAM205AQ6ZU69 1335 aa18.55■□□□□ 0.56
PTPN21-208ENST00000556564 KIF2CQ99661 725 aa18.54■□□□□ 0.56
PTPN21-208ENST00000556564 TRIM9Q9C026 710 aa18.54■□□□□ 0.56
PTPN21-208ENST00000556564 SPATC1LQ9H0A9 340 aa18.54■□□□□ 0.56
PTPN21-208ENST00000556564 PDE1BQ01064 536 aa18.54■□□□□ 0.56
PTPN21-208ENST00000556564 BTBD8Q5XKL5 378 aa18.54■□□□□ 0.56
PTPN21-208ENST00000556564 PXMP2Q9NR77 195 aa18.54■□□□□ 0.56
PTPN21-208ENST00000556564 DAAM1Q9Y4D1 1078 aa18.54■□□□□ 0.56
PTPN21-208ENST00000556564 INHBAP08476 426 aa18.54■□□□□ 0.56
PTPN21-208ENST00000556564 PDGFRBP09619 1106 aa18.54■□□□□ 0.56
PTPN21-208ENST00000556564 DPF3Q92784 378 aa18.54■□□□□ 0.56
PTPN21-208ENST00000556564 CCSER1Q9C0I3 900 aa18.54■□□□□ 0.56
PTPN21-208ENST00000556564 RRAGDQ9NQL2 400 aaPredicted RBP18.54■□□□□ 0.56
PTPN21-208ENST00000556564 ZMYND10O75800 440 aa18.54■□□□□ 0.56
PTPN21-208ENST00000556564 RECQLP46063 649 aaPredicted RBP18.54■□□□□ 0.56
PTPN21-208ENST00000556564 CATSPER3Q86XQ3 398 aa18.54■□□□□ 0.56
PTPN21-208ENST00000556564 GMCL1Q96IK5 515 aa18.54■□□□□ 0.56
PTPN21-208ENST00000556564 NUP85Q9BW27 656 aa18.54■□□□□ 0.56
PTPN21-208ENST00000556564 STRIP2Q9ULQ0 834 aa18.54■□□□□ 0.56
PTPN21-208ENST00000556564 CIB2O75838 187 aa18.54■□□□□ 0.56
PTPN21-208ENST00000556564 ACCSLQ4AC99 568 aa18.54■□□□□ 0.56
PTPN21-208ENST00000556564 GKAP1Q5VSY0 366 aaPredicted RBP18.54■□□□□ 0.56
PTPN21-208ENST00000556564 APOBEC3HQ6NTF7 200 aaKnown RBP18.54■□□□□ 0.56
PTPN21-208ENST00000556564 HEMGNQ9BXL5 484 aa18.54■□□□□ 0.56
PTPN21-208ENST00000556564 HEY1Q9Y5J3 304 aa18.54■□□□□ 0.56
PTPN21-208ENST00000556564 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.54■□□□□ 0.56
PTPN21-208ENST00000556564 ASAP2O43150 1006 aa18.53■□□□□ 0.56
PTPN21-208ENST00000556564 FDPSP14324 419 aaKnown RBP18.53■□□□□ 0.56
PTPN21-208ENST00000556564 RWDD2BP57060 319 aa18.53■□□□□ 0.56
PTPN21-208ENST00000556564 GPC5P78333 572 aa18.53■□□□□ 0.56
PTPN21-208ENST00000556564 RASGRP2Q7LDG7 609 aa18.53■□□□□ 0.56
PTPN21-208ENST00000556564 METTL16Q86W50 562 aaKnown RBP18.53■□□□□ 0.56
PTPN21-208ENST00000556564 RHOT2Q8IXI1 618 aa18.53■□□□□ 0.56
PTPN21-208ENST00000556564 EFCAB13Q8IY85 973 aa18.53■□□□□ 0.56
PTPN21-208ENST00000556564 IRAK4Q9NWZ3 460 aa18.53■□□□□ 0.56
PTPN21-208ENST00000556564 ZNF286BP0CG31 522 aa18.53■□□□□ 0.56
PTPN21-208ENST00000556564 TROAPQ12815 778 aa18.53■□□□□ 0.56
PTPN21-208ENST00000556564 CDR2LQ86X02 465 aaPredicted RBP18.53■□□□□ 0.56
PTPN21-208ENST00000556564 PBKQ96KB5 322 aa18.53■□□□□ 0.56
PTPN21-208ENST00000556564 ABHD10Q9NUJ1 306 aa18.53■□□□□ 0.56
PTPN21-208ENST00000556564 ARP10275 920 aa18.53■□□□□ 0.56
PTPN21-208ENST00000556564 RPS6KA2Q15349 733 aa18.53■□□□□ 0.56
PTPN21-208ENST00000556564 FAM102AQ5T9C2 384 aaPredicted RBP18.53■□□□□ 0.56
PTPN21-208ENST00000556564 CYP4F22Q6NT55 531 aa18.53■□□□□ 0.56
PTPN21-208ENST00000556564 GLB1LQ6UWU2 654 aa18.53■□□□□ 0.56
PTPN21-208ENST00000556564 SEPT5Q99719 369 aaPredicted RBP18.53■□□□□ 0.56
PTPN21-208ENST00000556564 ATP11BQ9Y2G3 1177 aa18.53■□□□□ 0.56
PTPN21-208ENST00000556564 YY1P25490 414 aa18.53■□□□□ 0.56
PTPN21-208ENST00000556564 SDC4P31431 198 aa18.53■□□□□ 0.56
PTPN21-208ENST00000556564 PLTPP55058 493 aa18.53■□□□□ 0.56
PTPN21-208ENST00000556564 ZNF449Q6P9G9 518 aa18.53■□□□□ 0.56
PTPN21-208ENST00000556564 SIK2Q9H0K1 926 aa18.53■□□□□ 0.56
PTPN21-208ENST00000556564 PDXKO00764 312 aa18.53■□□□□ 0.56
PTPN21-208ENST00000556564 RALAP11233 206 aa18.53■□□□□ 0.56
PTPN21-208ENST00000556564 DSG3P32926 999 aa18.53■□□□□ 0.56
PTPN21-208ENST00000556564 CYP26B1Q9NR63 512 aa18.53■□□□□ 0.56
PTPN21-208ENST00000556564 TM4SF1P30408 202 aa18.52■□□□□ 0.56
PTPN21-208ENST00000556564 RBP5P82980 135 aa18.52■□□□□ 0.56
PTPN21-208ENST00000556564 VGLL4Q14135 290 aa18.52■□□□□ 0.56
PTPN21-208ENST00000556564 FRMD5Q7Z6J6 570 aa18.52■□□□□ 0.56
PTPN21-208ENST00000556564 GIMAP7Q8NHV1 300 aa18.52■□□□□ 0.56
PTPN21-208ENST00000556564 TNIP3Q96KP6 325 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms