RNA–Protein interactions for RNA: ENST00000550102.5

CHMP1A-208, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 5 BASIC

Gene CHMP1A, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-208ENST00000550102 CSRNP2Q9H175 543 aa19.06■□□□□ 0.64
CHMP1A-208ENST00000550102 PRMT7Q9NVM4 692 aaPredicted RBP19.06■□□□□ 0.64
CHMP1A-208ENST00000550102 MEIS3P2A8K0S8 358 aa19.05■□□□□ 0.64
CHMP1A-208ENST00000550102 B4GALT5O43286 388 aa19.05■□□□□ 0.64
CHMP1A-208ENST00000550102 FGF18O76093 207 aa19.05■□□□□ 0.64
CHMP1A-208ENST00000550102 CSPG5O95196 566 aa19.05■□□□□ 0.64
CHMP1A-208ENST00000550102 NCLP19338 710 aaKnown RBP19.05■□□□□ 0.64
CHMP1A-208ENST00000550102 LONP1P36776 959 aaKnown RBP19.05■□□□□ 0.64
CHMP1A-208ENST00000550102 UBE3AQ05086 875 aa19.05■□□□□ 0.64
CHMP1A-208ENST00000550102 TMEM119Q4V9L6 283 aa19.05■□□□□ 0.64
CHMP1A-208ENST00000550102 TCEAL5Q5H9L2 206 aa19.05■□□□□ 0.64
CHMP1A-208ENST00000550102 NOMO2Q5JPE7 1267 aa19.05■□□□□ 0.64
CHMP1A-208ENST00000550102 MRPL10Q7Z7H8 261 aaKnown RBP19.05■□□□□ 0.64
CHMP1A-208ENST00000550102 HACE1Q8IYU2 909 aa19.05■□□□□ 0.64
CHMP1A-208ENST00000550102 SPPL3Q8TCT6 385 aa19.05■□□□□ 0.64
CHMP1A-208ENST00000550102 URGCPQ8TCY9 931 aa19.05■□□□□ 0.64
CHMP1A-208ENST00000550102 DRC1Q96MC2 740 aa19.05■□□□□ 0.64
CHMP1A-208ENST00000550102 PNMA5Q96PV4 448 aa19.05■□□□□ 0.64
CHMP1A-208ENST00000550102 ASB2Q96Q27 587 aa19.05■□□□□ 0.64
CHMP1A-208ENST00000550102 RUSC1Q9BVN2 902 aa19.05■□□□□ 0.64
CHMP1A-208ENST00000550102 TRIM6Q9C030 488 aaPredicted RBP19.05■□□□□ 0.64
CHMP1A-208ENST00000550102 ZSCAN16Q9H4T2 348 aaPredicted RBP19.05■□□□□ 0.64
CHMP1A-208ENST00000550102 RSAD1Q9HA92 442 aa19.05■□□□□ 0.64
CHMP1A-208ENST00000550102 INPP5FQ9Y2H2 1132 aa19.05■□□□□ 0.64
CHMP1A-208ENST00000550102 TCF20Q9UGU0 1960 aaKnown RBP19.04■□□□□ 0.64
CHMP1A-208ENST00000550102 XIRP2A4UGR9 3374 aa19.04■□□□□ 0.64
CHMP1A-208ENST00000550102 BDP1A6H8Y1 2624 aa19.04■□□□□ 0.64
CHMP1A-208ENST00000550102 SSBP05455 408 aaKnown RBP eCLIP19.04■□□□□ 0.64
CHMP1A-208ENST00000550102 DNAJB1P25685 340 aa19.04■□□□□ 0.64
CHMP1A-208ENST00000550102 UBA7P41226 1012 aa19.04■□□□□ 0.64
CHMP1A-208ENST00000550102 EFNA5P52803 228 aa19.04■□□□□ 0.64
CHMP1A-208ENST00000550102 TFF2Q03403 129 aa19.04■□□□□ 0.64
CHMP1A-208ENST00000550102 MAPK6Q16659 721 aa19.04■□□□□ 0.64
CHMP1A-208ENST00000550102 FAM187BQ17R55 369 aa19.04■□□□□ 0.64
CHMP1A-208ENST00000550102 SLC27A1Q6PCB7 646 aa19.04■□□□□ 0.64
CHMP1A-208ENST00000550102 KCNT2Q6UVM3 1135 aa19.04■□□□□ 0.64
CHMP1A-208ENST00000550102 POF1BQ8WVV4 589 aa19.04■□□□□ 0.64
CHMP1A-208ENST00000550102 PPP2R3CQ969Q6 453 aa19.04■□□□□ 0.64
CHMP1A-208ENST00000550102 CALML4Q96GE6 196 aa19.04■□□□□ 0.64
CHMP1A-208ENST00000550102 TIPINQ9BVW5 301 aa19.04■□□□□ 0.64
CHMP1A-208ENST00000550102 EIF2AQ9BY44 585 aaKnown RBP19.04■□□□□ 0.64
CHMP1A-208ENST00000550102 TBC1D13Q9NVG8 400 aa19.04■□□□□ 0.64
CHMP1A-208ENST00000550102 IPPQ9Y573 584 aa19.04■□□□□ 0.64
CHMP1A-208ENST00000550102 CLIC4Q9Y696 253 aa19.04■□□□□ 0.64
CHMP1A-208ENST00000550102 CARNS1A5YM72 827 aa19.03■□□□□ 0.64
CHMP1A-208ENST00000550102 HIP1RO75146 1068 aa19.03■□□□□ 0.64
CHMP1A-208ENST00000550102 ZC3H11AO75152 810 aaKnown RBP eCLIP19.03■□□□□ 0.642e-6■■■■■ 37.4
CHMP1A-208ENST00000550102 OFD1O75665 1012 aa19.03■□□□□ 0.64
CHMP1A-208ENST00000550102 PRKCBP05771 671 aa19.03■□□□□ 0.64
CHMP1A-208ENST00000550102 ITGA4P13612 1032 aa19.03■□□□□ 0.64
CHMP1A-208ENST00000550102 PBX3P40426 434 aa19.03■□□□□ 0.64
CHMP1A-208ENST00000550102 RNASELQ05823 741 aaKnown RBP19.03■□□□□ 0.64
CHMP1A-208ENST00000550102 DMP1Q13316 513 aaPredicted RBP19.03■□□□□ 0.64
CHMP1A-208ENST00000550102 CAMK1Q14012 370 aa19.03■□□□□ 0.64
CHMP1A-208ENST00000550102 PTPAQ15257 358 aa19.03■□□□□ 0.64
CHMP1A-208ENST00000550102 TMEM132AQ24JP5 1023 aa19.03■□□□□ 0.64
CHMP1A-208ENST00000550102 RINT1Q6NUQ1 792 aa19.03■□□□□ 0.64
CHMP1A-208ENST00000550102 FAM173BQ6P4H8 233 aa19.03■□□□□ 0.64
CHMP1A-208ENST00000550102 AGMOQ6ZNB7 445 aa19.03■□□□□ 0.64
CHMP1A-208ENST00000550102 RASSF8Q8NHQ8 419 aa19.03■□□□□ 0.64
CHMP1A-208ENST00000550102 PLIN2Q99541 437 aa19.03■□□□□ 0.64
CHMP1A-208ENST00000550102 KIFC3Q9BVG8 833 aa19.03■□□□□ 0.64
CHMP1A-208ENST00000550102 COL25A1Q9BXS0 654 aaPredicted RBP19.03■□□□□ 0.64
CHMP1A-208ENST00000550102 CCDC113Q9H0I3 377 aa19.03■□□□□ 0.64
CHMP1A-208ENST00000550102 FZD8Q9H461 694 aa19.03■□□□□ 0.64
CHMP1A-208ENST00000550102 UBE2ZQ9H832 354 aaPredicted RBP19.03■□□□□ 0.64
CHMP1A-208ENST00000550102 UBN1Q9NPG3 1134 aa19.03■□□□□ 0.64
CHMP1A-208ENST00000550102 TLR9Q9NR96 1032 aa19.03■□□□□ 0.64
CHMP1A-208ENST00000550102 SPG21Q9NZD8 308 aa19.03■□□□□ 0.64
CHMP1A-208ENST00000550102 LZTS1Q9Y250 596 aa19.03■□□□□ 0.64
CHMP1A-208ENST00000550102 GUCY2CP25092 1073 aa19.02■□□□□ 0.64
CHMP1A-208ENST00000550102 GRIN1Q05586 938 aa19.02■□□□□ 0.64
CHMP1A-208ENST00000550102 PRPF4BQ13523 1007 aaKnown RBP19.02■□□□□ 0.64
CHMP1A-208ENST00000550102 C1orf186Q6ZWK4 172 aa19.02■□□□□ 0.64
CHMP1A-208ENST00000550102 DAW1Q8N136 415 aa19.02■□□□□ 0.64
CHMP1A-208ENST00000550102 SMG8Q8ND04 991 aaKnown RBP19.02■□□□□ 0.64
CHMP1A-208ENST00000550102 NXF3Q9H4D5 531 aaKnown RBP19.02■□□□□ 0.64
CHMP1A-208ENST00000550102 KCND2Q9NZV8 630 aa19.02■□□□□ 0.64
CHMP1A-208ENST00000550102 ZMYM2Q9UBW7 1377 aa19.02■□□□□ 0.64
CHMP1A-208ENST00000550102 PHLPP2Q6ZVD8 1323 aa19.01■□□□□ 0.63
CHMP1A-208ENST00000550102 A0A1B0GUA9 196 aa19.01■□□□□ 0.63
CHMP1A-208ENST00000550102 N4BP3O15049 544 aa19.01■□□□□ 0.63
CHMP1A-208ENST00000550102 NCK2O43639 380 aa19.01■□□□□ 0.63
CHMP1A-208ENST00000550102 NPTXRO95502 500 aa19.01■□□□□ 0.63
CHMP1A-208ENST00000550102 PLA2G4BP0C869 781 aa19.01■□□□□ 0.63
CHMP1A-208ENST00000550102 PDIA4P13667 645 aaKnown RBP19.01■□□□□ 0.63
CHMP1A-208ENST00000550102 LIG1P18858 919 aa19.01■□□□□ 0.63
CHMP1A-208ENST00000550102 ALDH7A1P49419 539 aaKnown RBP19.01■□□□□ 0.63
CHMP1A-208ENST00000550102 SLC12A3P55017 1021 aa19.01■□□□□ 0.63
CHMP1A-208ENST00000550102 BCAR1P56945 870 aa19.01■□□□□ 0.63
CHMP1A-208ENST00000550102 PLCB3Q01970 1234 aa19.01■□□□□ 0.63
CHMP1A-208ENST00000550102 KRT17Q04695 432 aa19.01■□□□□ 0.63
CHMP1A-208ENST00000550102 MAPK7Q13164 816 aa19.01■□□□□ 0.63
CHMP1A-208ENST00000550102 COL19A1Q14993 1142 aa19.01■□□□□ 0.63
CHMP1A-208ENST00000550102 SLC39A11Q8N1S5 342 aa19.01■□□□□ 0.63
CHMP1A-208ENST00000550102 SYT2Q8N9I0 419 aaPredicted RBP19.01■□□□□ 0.63
CHMP1A-208ENST00000550102 MRPS27Q92552 414 aaKnown RBP19.01■□□□□ 0.63
CHMP1A-208ENST00000550102 C17orf75Q9HAS0 396 aa19.01■□□□□ 0.63
CHMP1A-208ENST00000550102 POLD4Q9HCU8 107 aa19.01■□□□□ 0.63
CHMP1A-208ENST00000550102 PUF60Q9UHX1 559 aaKnown RBP19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms