RNA–Protein interactions for RNA: ENST00000527154.5

CHMP4A-203, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 571 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-203ENST00000527154 TTC22Q5TAA0 569 aa18.33■□□□□ 0.52
CHMP4A-203ENST00000527154 NFXL1Q6ZNB6 911 aa18.33■□□□□ 0.52
CHMP4A-203ENST00000527154 ZNF410Q86VK4 478 aa18.33■□□□□ 0.52
CHMP4A-203ENST00000527154 GPR65Q8IYL9 337 aa18.33■□□□□ 0.52
CHMP4A-203ENST00000527154 NLRP7Q8WX94 980 aa18.33■□□□□ 0.52
CHMP4A-203ENST00000527154 SMG7Q92540 1137 aaKnown RBP18.33■□□□□ 0.52
CHMP4A-203ENST00000527154 NT5C3AQ9H0P0 336 aa18.33■□□□□ 0.52
CHMP4A-203ENST00000527154 NRBP2Q9NSY0 501 aa18.33■□□□□ 0.52
CHMP4A-203ENST00000527154 SSX2IPQ9Y2D8 614 aa18.33■□□□□ 0.52
CHMP4A-203ENST00000527154 ZFP37Q9Y6Q3 630 aaPredicted RBP18.33■□□□□ 0.52
CHMP4A-203ENST00000527154 NUMBLQ9Y6R0 609 aa18.33■□□□□ 0.52
CHMP4A-203ENST00000527154 KANSL1LA0AUZ9 987 aa18.32■□□□□ 0.52
CHMP4A-203ENST00000527154 WDR64B1ANS9 1081 aa18.32■□□□□ 0.52
CHMP4A-203ENST00000527154 NRP1O14786 923 aa18.32■□□□□ 0.52
CHMP4A-203ENST00000527154 STBD1O95210 358 aa18.32■□□□□ 0.52
CHMP4A-203ENST00000527154 GLUD1P00367 558 aa18.32■□□□□ 0.52
CHMP4A-203ENST00000527154 MAGEA9P43362 315 aa18.32■□□□□ 0.52
CHMP4A-203ENST00000527154 RNASELQ05823 741 aaKnown RBP18.32■□□□□ 0.52
CHMP4A-203ENST00000527154 UGCGQ16739 394 aa18.32■□□□□ 0.52
CHMP4A-203ENST00000527154 ST3GAL2Q16842 350 aa18.32■□□□□ 0.52
CHMP4A-203ENST00000527154 TWF2Q6IBS0 349 aaKnown RBP18.32■□□□□ 0.52
CHMP4A-203ENST00000527154 LILRA6Q6PI73 481 aa18.32■□□□□ 0.52
CHMP4A-203ENST00000527154 SHDQ96IW2 340 aa18.32■□□□□ 0.52
CHMP4A-203ENST00000527154 NIFKQ9BYG3 293 aaKnown RBP18.32■□□□□ 0.52
CHMP4A-203ENST00000527154 PLEKHA4Q9H4M7 779 aa18.32■□□□□ 0.52
CHMP4A-203ENST00000527154 CHST7Q9NS84 486 aa18.32■□□□□ 0.52
CHMP4A-203ENST00000527154 ZDHHC7Q9NXF8 308 aa18.32■□□□□ 0.52
CHMP4A-203ENST00000527154 INPP5FQ9Y2H2 1132 aa18.32■□□□□ 0.52
CHMP4A-203ENST00000527154 RBM8AQ9Y5S9 174 aaKnown RBP18.32■□□□□ 0.52
CHMP4A-203ENST00000527154 A0A087WZ62 844 aa18.31■□□□□ 0.52
CHMP4A-203ENST00000527154 ESYT2A0FGR8 921 aa18.31■□□□□ 0.52
CHMP4A-203ENST00000527154 SPDYE4A6NLX3 237 aa18.31■□□□□ 0.52
CHMP4A-203ENST00000527154 EDIL3O43854 480 aa18.31■□□□□ 0.52
CHMP4A-203ENST00000527154 ALDH2P05091 517 aa18.31■□□□□ 0.52
CHMP4A-203ENST00000527154 DSG1Q02413 1049 aa18.31■□□□□ 0.52
CHMP4A-203ENST00000527154 ELMSAN1Q6PJG2 1045 aa18.31■□□□□ 0.52
CHMP4A-203ENST00000527154 RSPO2Q6UXX9 243 aaPredicted RBP18.31■□□□□ 0.52
CHMP4A-203ENST00000527154 TAS1R1Q7RTX1 841 aa18.31■□□□□ 0.52
CHMP4A-203ENST00000527154 TRMT1LQ7Z2T5 733 aaKnown RBP18.31■□□□□ 0.52
CHMP4A-203ENST00000527154 RAB11FIP4Q86YS3 637 aa18.31■□□□□ 0.52
CHMP4A-203ENST00000527154 CLDN23Q96B33 292 aa18.31■□□□□ 0.52
CHMP4A-203ENST00000527154 PGBD4Q96DM1 585 aa18.31■□□□□ 0.52
CHMP4A-203ENST00000527154 FDXACB1Q9BRP7 624 aaPredicted RBP18.31■□□□□ 0.52
CHMP4A-203ENST00000527154 RPP25Q9BUL9 199 aaKnown RBP18.31■□□□□ 0.52
CHMP4A-203ENST00000527154 PRKD2Q9BZL6 878 aa18.31■□□□□ 0.52
CHMP4A-203ENST00000527154 INO80BQ9C086 356 aaPredicted RBP18.31■□□□□ 0.52
CHMP4A-203ENST00000527154 RBM28Q9NW13 759 aaKnown RBP18.31■□□□□ 0.52
CHMP4A-203ENST00000527154 KANSL3Q9P2N6 904 aa18.31■□□□□ 0.52
CHMP4A-203ENST00000527154 NCDNQ9UBB6 729 aa18.31■□□□□ 0.52
CHMP4A-203ENST00000527154 PIN4Q9Y237 131 aaKnown RBP18.31■□□□□ 0.52
CHMP4A-203ENST00000527154 CNTNAP2Q9UHC6 1331 aa18.3■□□□□ 0.52
CHMP4A-203ENST00000527154 SSBP05455 408 aaKnown RBP eCLIP18.3■□□□□ 0.52
CHMP4A-203ENST00000527154 URODP06132 367 aa18.3■□□□□ 0.52
CHMP4A-203ENST00000527154 PRKCQQ04759 706 aa18.3■□□□□ 0.52
CHMP4A-203ENST00000527154 DSC1Q08554 894 aa18.3■□□□□ 0.52
CHMP4A-203ENST00000527154 APOA5Q6Q788 366 aa18.3■□□□□ 0.52
CHMP4A-203ENST00000527154 B3GNT9Q6UX72 402 aa18.3■□□□□ 0.52
CHMP4A-203ENST00000527154 MICU3Q86XE3 530 aa18.3■□□□□ 0.52
CHMP4A-203ENST00000527154 MBOAT7Q96N66 472 aa18.3■□□□□ 0.52
CHMP4A-203ENST00000527154 DISC1Q9NRI5 854 aa18.3■□□□□ 0.52
CHMP4A-203ENST00000527154 AGPAT5Q9NUQ2 364 aa18.3■□□□□ 0.52
CHMP4A-203ENST00000527154 ZSCAN32Q9NX65 697 aa18.3■□□□□ 0.52
CHMP4A-203ENST00000527154 FAN1Q9Y2M0 1017 aa18.3■□□□□ 0.52
CHMP4A-203ENST00000527154 PCDHB2Q9Y5E7 798 aa18.3■□□□□ 0.52
CHMP4A-203ENST00000527154 ADAMTS3O15072 1205 aa18.29■□□□□ 0.52
CHMP4A-203ENST00000527154 GPC5P78333 572 aa18.29■□□□□ 0.52
CHMP4A-203ENST00000527154 LONRF3Q496Y0 759 aa18.29■□□□□ 0.52
CHMP4A-203ENST00000527154 UBXN11Q5T124 520 aa18.29■□□□□ 0.52
CHMP4A-203ENST00000527154 COLGALT2Q8IYK4 626 aa18.29■□□□□ 0.52
CHMP4A-203ENST00000527154 URGCPQ8TCY9 931 aa18.29■□□□□ 0.52
CHMP4A-203ENST00000527154 FGF14Q92915 247 aa18.29■□□□□ 0.52
CHMP4A-203ENST00000527154 SCLT1Q96NL6 688 aa18.29■□□□□ 0.52
CHMP4A-203ENST00000527154 BCO2Q9BYV7 579 aa18.29■□□□□ 0.52
CHMP4A-203ENST00000527154 ZMYND12Q9H0C1 365 aa18.29■□□□□ 0.52
CHMP4A-203ENST00000527154 GBP3Q9H0R5 595 aa18.29■□□□□ 0.52
CHMP4A-203ENST00000527154 RSAD1Q9HA92 442 aa18.29■□□□□ 0.52
CHMP4A-203ENST00000527154 IFT122Q9HBG6 1241 aa18.29■□□□□ 0.52
CHMP4A-203ENST00000527154 PRMT8Q9NR22 394 aaPredicted RBP18.29■□□□□ 0.52
CHMP4A-203ENST00000527154 FAM217BQ9NTX9 383 aaPredicted RBP18.29■□□□□ 0.52
CHMP4A-203ENST00000527154 CDV3Q9UKY7 258 aaKnown RBP18.29■□□□□ 0.52
CHMP4A-203ENST00000527154 SMG5Q9UPR3 1016 aaKnown RBP18.29■□□□□ 0.52
CHMP4A-203ENST00000527154 V9GY48 417 aaPredicted RBP18.29■□□□□ 0.52
CHMP4A-203ENST00000527154 MIA3Q5JRA6 1907 aa18.29■□□□□ 0.52
CHMP4A-203ENST00000527154 COL4A3Q01955 1670 aa18.28■□□□□ 0.52
CHMP4A-203ENST00000527154 MTCL1Q9Y4B5 1905 aaKnown RBP18.28■□□□□ 0.52
CHMP4A-203ENST00000527154 LAMTOR5O43504 91 aa18.28■□□□□ 0.52
CHMP4A-203ENST00000527154 TBC1D4O60343 1298 aa18.28■□□□□ 0.52
CHMP4A-203ENST00000527154 HOXA11P31270 313 aaPredicted RBP18.28■□□□□ 0.52
CHMP4A-203ENST00000527154 GLUD2P49448 558 aa18.28■□□□□ 0.52
CHMP4A-203ENST00000527154 AK2P54819 239 aa18.28■□□□□ 0.52
CHMP4A-203ENST00000527154 MLF2Q15773 248 aaPredicted RBP18.28■□□□□ 0.52
CHMP4A-203ENST00000527154 JAKMIP3Q5VZ66 844 aa18.28■□□□□ 0.52
CHMP4A-203ENST00000527154 EXOC6Q8TAG9 804 aa18.28■□□□□ 0.52
CHMP4A-203ENST00000527154 RIT2Q99578 217 aa18.28■□□□□ 0.52
CHMP4A-203ENST00000527154 PARD6AQ9NPB6 346 aa18.28■□□□□ 0.52
CHMP4A-203ENST00000527154 FNIP2Q9P278 1114 aa18.28■□□□□ 0.52
CHMP4A-203ENST00000527154 MTF2Q9Y483 593 aaPredicted RBP18.28■□□□□ 0.52
CHMP4A-203ENST00000527154 C2CD2LO14523 706 aa18.27■□□□□ 0.52
CHMP4A-203ENST00000527154 TGM5O43548 720 aa18.27■□□□□ 0.52
CHMP4A-203ENST00000527154 TDGF1P13385 188 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 129.3 ms