RNA–Protein interactions for RNA: ENST00000526971.1

PKP3-204, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 532 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-204ENST00000526971 BMP2KQ9NSY1 1161 aaPredicted RBP21.22■□□□□ 0.99
PKP3-204ENST00000526971 DBR1Q9UK59 544 aaKnown RBP21.22■□□□□ 0.99
PKP3-204ENST00000526971 MTMR6Q9Y217 621 aa21.22■□□□□ 0.99
PKP3-204ENST00000526971 DGAT1O75907 488 aa21.21■□□□□ 0.99
PKP3-204ENST00000526971 PBX3P40426 434 aa21.21■□□□□ 0.99
PKP3-204ENST00000526971 RESTQ13127 1097 aa21.21■□□□□ 0.99
PKP3-204ENST00000526971 ARL6IP4Q66PJ3 421 aaKnown RBP21.21■□□□□ 0.99
PKP3-204ENST00000526971 POTEGQ6S5H5 508 aa21.21■□□□□ 0.99
PKP3-204ENST00000526971 ZNF410Q86VK4 478 aa21.21■□□□□ 0.99
PKP3-204ENST00000526971 TCP11Q8WWU5 503 aa21.21■□□□□ 0.99
PKP3-204ENST00000526971 PRPF31Q8WWY3 499 aaKnown RBP21.21■□□□□ 0.99
PKP3-204ENST00000526971 PBXIP1Q96AQ6 731 aa21.21■□□□□ 0.99
PKP3-204ENST00000526971 GCOM2Q9BZD3 368 aaPredicted RBP21.21■□□□□ 0.99
PKP3-204ENST00000526971 XPNPEP1Q9NQW7 623 aa21.21■□□□□ 0.99
PKP3-204ENST00000526971 A0A087WZ62 844 aa21.2■□□□□ 0.98
PKP3-204ENST00000526971 STX6O43752 255 aa21.2■□□□□ 0.98
PKP3-204ENST00000526971 HSP90AA1P07900 732 aaKnown RBP21.2■□□□□ 0.98
PKP3-204ENST00000526971 ATF7P17544 494 aaPredicted RBP21.2■□□□□ 0.98
PKP3-204ENST00000526971 LAG3P18627 525 aa21.2■□□□□ 0.98
PKP3-204ENST00000526971 ECM1Q16610 540 aa21.2■□□□□ 0.98
PKP3-204ENST00000526971 SYCE2Q6PIF2 218 aa21.2■□□□□ 0.98
PKP3-204ENST00000526971 KSR1Q8IVT5 923 aa21.2■□□□□ 0.98
PKP3-204ENST00000526971 PSPC1Q8WXF1 523 aaKnown RBP21.2■□□□□ 0.98
PKP3-204ENST00000526971 MRPS27Q92552 414 aaKnown RBP21.2■□□□□ 0.98
PKP3-204ENST00000526971 CASD1Q96PB1 797 aa21.2■□□□□ 0.98
PKP3-204ENST00000526971 CDCA3Q99618 268 aaPredicted RBP21.2■□□□□ 0.98
PKP3-204ENST00000526971 MTRQ99707 1265 aa21.2■□□□□ 0.98
PKP3-204ENST00000526971 FDXACB1Q9BRP7 624 aaPredicted RBP21.2■□□□□ 0.98
PKP3-204ENST00000526971 S1PR5Q9H228 398 aa21.2■□□□□ 0.98
PKP3-204ENST00000526971 ELAC1Q9H777 363 aaKnown RBP21.2■□□□□ 0.98
PKP3-204ENST00000526971 CDH22Q9UJ99 828 aa21.2■□□□□ 0.98
PKP3-204ENST00000526971 COL4A3BPQ9Y5P4 624 aa21.2■□□□□ 0.98
PKP3-204ENST00000526971 PP2D1A8MPX8 630 aa21.19■□□□□ 0.98
PKP3-204ENST00000526971 HIDE1A8MVS5 230 aa21.19■□□□□ 0.98
PKP3-204ENST00000526971 BMP15O95972 392 aa21.19■□□□□ 0.98
PKP3-204ENST00000526971 PLCB3Q01970 1234 aa21.19■□□□□ 0.98
PKP3-204ENST00000526971 LAMTOR4Q0VGL1 99 aa21.19■□□□□ 0.98
PKP3-204ENST00000526971 KRT79Q5XKE5 535 aa21.19■□□□□ 0.98
PKP3-204ENST00000526971 TMEM184AQ6ZMB5 413 aa21.19■□□□□ 0.98
PKP3-204ENST00000526971 SNX29Q8TEQ0 813 aa21.19■□□□□ 0.98
PKP3-204ENST00000526971 NLRP4Q96MN2 994 aa21.19■□□□□ 0.98
PKP3-204ENST00000526971 APOL5Q9BWW9 433 aa21.19■□□□□ 0.98
PKP3-204ENST00000526971 TMEM117Q9H0C3 514 aa21.19■□□□□ 0.98
PKP3-204ENST00000526971 LZTS1Q9Y250 596 aa21.19■□□□□ 0.98
PKP3-204ENST00000526971 VWA3AA6NCI4 1184 aa21.18■□□□□ 0.98
PKP3-204ENST00000526971 ASAP2O43150 1006 aa21.18■□□□□ 0.98
PKP3-204ENST00000526971 TCF15Q12870 199 aa21.18■□□□□ 0.98
PKP3-204ENST00000526971 SF3A1Q15459 793 aaKnown RBP21.18■□□□□ 0.98
PKP3-204ENST00000526971 ANKRD54Q6NXT1 300 aa21.18■□□□□ 0.98
PKP3-204ENST00000526971 LLGL2Q6P1M3 1020 aa21.18■□□□□ 0.98
PKP3-204ENST00000526971 ASIC4Q96FT7 647 aa21.18■□□□□ 0.98
PKP3-204ENST00000526971 TCF25Q9BQ70 676 aa21.18■□□□□ 0.98
PKP3-204ENST00000526971 INO80BQ9C086 356 aaPredicted RBP21.18■□□□□ 0.98
PKP3-204ENST00000526971 KIAA1024Q9UPX6 916 aa21.18■□□□□ 0.98
PKP3-204ENST00000526971 USO1O60763 962 aaKnown RBP21.17■□□□□ 0.98
PKP3-204ENST00000526971 CSDE1O75534 798 aaKnown RBP21.17■□□□□ 0.98
PKP3-204ENST00000526971 SRGAP2CP0DJJ0 459 aa21.17■□□□□ 0.98
PKP3-204ENST00000526971 FGFR4P22455 802 aa21.17■□□□□ 0.98
PKP3-204ENST00000526971 CDC25AP30304 524 aa21.17■□□□□ 0.98
PKP3-204ENST00000526971 ARL2P36404 184 aa21.17■□□□□ 0.98
PKP3-204ENST00000526971 VCPP55072 806 aaKnown RBP21.17■□□□□ 0.98
PKP3-204ENST00000526971 SIGLEC14Q08ET2 396 aa21.17■□□□□ 0.98
PKP3-204ENST00000526971 MXD4Q14582 209 aaPredicted RBP21.17■□□□□ 0.98
PKP3-204ENST00000526971 CLLU1OSQ5K130 101 aa21.17■□□□□ 0.98
PKP3-204ENST00000526971 PDE12Q6L8Q7 609 aaKnown RBP21.17■□□□□ 0.98
PKP3-204ENST00000526971 KCNT2Q6UVM3 1135 aa21.17■□□□□ 0.98
PKP3-204ENST00000526971 ECHDC2Q86YB7 292 aa21.17■□□□□ 0.98
PKP3-204ENST00000526971 FBXL6Q8N531 539 aa21.17■□□□□ 0.98
PKP3-204ENST00000526971 MMTAG2Q9BU76 263 aaKnown RBP21.17■□□□□ 0.98
PKP3-204ENST00000526971 ZSCAN16Q9H4T2 348 aaPredicted RBP21.17■□□□□ 0.98
PKP3-204ENST00000526971 IFT122Q9HBG6 1241 aa21.17■□□□□ 0.98
PKP3-204ENST00000526971 ENTPD7Q9NQZ7 604 aa21.17■□□□□ 0.98
PKP3-204ENST00000526971 DDX19AQ9NUU7 478 aaKnown RBP21.17■□□□□ 0.98
PKP3-204ENST00000526971 RNF216Q9NWF9 866 aaPredicted RBP21.17■□□□□ 0.98
PKP3-204ENST00000526971 ARHGEF35A5YM69 484 aa21.16■□□□□ 0.98
PKP3-204ENST00000526971 SFPQP23246 707 aaKnown RBP eCLIP21.16■□□□□ 0.98
PKP3-204ENST00000526971 SP100P23497 879 aaPredicted RBP21.16■□□□□ 0.98
PKP3-204ENST00000526971 FAM173BQ6P4H8 233 aa21.16■□□□□ 0.98
PKP3-204ENST00000526971 PADI6Q6TGC4 694 aa21.16■□□□□ 0.98
PKP3-204ENST00000526971 LRRC43Q8N309 656 aa21.16■□□□□ 0.98
PKP3-204ENST00000526971 CLIC4Q9Y696 253 aa21.16■□□□□ 0.98
PKP3-204ENST00000526971 FSD2A1L4K1 749 aa21.15■□□□□ 0.98
PKP3-204ENST00000526971 PDIA4P13667 645 aaKnown RBP21.15■□□□□ 0.98
PKP3-204ENST00000526971 ZSCAN20P17040 1043 aaPredicted RBP21.15■□□□□ 0.98
PKP3-204ENST00000526971 PTPN21Q16825 1174 aa21.15■□□□□ 0.98
PKP3-204ENST00000526971 SRGAP1Q7Z6B7 1085 aa21.15■□□□□ 0.98
PKP3-204ENST00000526971 SUGP1Q8IWZ8 645 aaKnown RBP21.15■□□□□ 0.98
PKP3-204ENST00000526971 RNF149Q8NC42 400 aa21.15■□□□□ 0.98
PKP3-204ENST00000526971 MCPH1Q8NEM0 835 aa21.15■□□□□ 0.98
PKP3-204ENST00000526971 ZNF558Q96NG5 402 aa21.15■□□□□ 0.98
PKP3-204ENST00000526971 DNM3Q9UQ16 869 aa21.15■□□□□ 0.98
PKP3-204ENST00000526971 PLXNA3P51805 1871 aa21.15■□□□□ 0.98
PKP3-204ENST00000526971 DENND4AQ7Z401 1863 aa21.14■□□□□ 0.97
PKP3-204ENST00000526971 CYP11B2P19099 503 aa21.14■□□□□ 0.97
PKP3-204ENST00000526971 PTPN5P54829 565 aa21.14■□□□□ 0.97
PKP3-204ENST00000526971 TFDP1Q14186 410 aa21.14■□□□□ 0.97
PKP3-204ENST00000526971 PTPAQ15257 358 aa21.14■□□□□ 0.97
PKP3-204ENST00000526971 ZNF598Q86UK7 904 aaKnown RBP21.14■□□□□ 0.97
PKP3-204ENST00000526971 SPRYD3Q8NCJ5 442 aa21.14■□□□□ 0.97
PKP3-204ENST00000526971 RNF169Q8NCN4 708 aa21.14■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 140.7 ms