RNA–Protein interactions for RNA: ENST00000523261.1

NKX3-1-202, Transcript of NK3 homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NKX3-1, Length 713 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-202ENST00000523261 MAP4K1Q92918 833 aa15.73■□□□□ 0.11
NKX3-1-202ENST00000523261 CDH7Q9ULB5 785 aa15.73■□□□□ 0.11
NKX3-1-202ENST00000523261 PCDHB15Q9Y5E8 787 aa15.73■□□□□ 0.11
NKX3-1-202ENST00000523261 MAFBQ9Y5Q3 323 aaPredicted RBP15.73■□□□□ 0.11
NKX3-1-202ENST00000523261 SHISA7A6NL88 538 aa15.72■□□□□ 0.11
NKX3-1-202ENST00000523261 MEIS1O00470 390 aa15.72■□□□□ 0.11
NKX3-1-202ENST00000523261 FOXD2O60548 495 aaPredicted RBP15.72■□□□□ 0.11
NKX3-1-202ENST00000523261 C1RP00736 705 aa15.72■□□□□ 0.11
NKX3-1-202ENST00000523261 ALDH2P05091 517 aa15.72■□□□□ 0.11
NKX3-1-202ENST00000523261 TMOD1P28289 359 aa15.72■□□□□ 0.11
NKX3-1-202ENST00000523261 SMARCA1P28370 1054 aa15.72■□□□□ 0.11
NKX3-1-202ENST00000523261 LIMK1P53667 647 aa15.72■□□□□ 0.11
NKX3-1-202ENST00000523261 TWF2Q6IBS0 349 aaKnown RBP15.72■□□□□ 0.11
NKX3-1-202ENST00000523261 MIS18BP1Q6P0N0 1132 aa15.72■□□□□ 0.11
NKX3-1-202ENST00000523261 MAMSTRQ6ZN01 415 aa15.72■□□□□ 0.11
NKX3-1-202ENST00000523261 MTSS1LQ765P7 747 aa15.72■□□□□ 0.11
NKX3-1-202ENST00000523261 TRMT1LQ7Z2T5 733 aaKnown RBP15.72■□□□□ 0.11
NKX3-1-202ENST00000523261 RILPL2Q969X0 211 aa15.72■□□□□ 0.11
NKX3-1-202ENST00000523261 TMEM175Q9BSA9 504 aa15.72■□□□□ 0.11
NKX3-1-202ENST00000523261 LY9Q9HBG7 655 aa15.72■□□□□ 0.11
NKX3-1-202ENST00000523261 FAM105AQ9NUU6 356 aa15.72■□□□□ 0.11
NKX3-1-202ENST00000523261 CEP131Q9UPN4 1083 aa15.72■□□□□ 0.11
NKX3-1-202ENST00000523261 FAN1Q9Y2M0 1017 aa15.72■□□□□ 0.11
NKX3-1-202ENST00000523261 F5P12259 2224 aa15.71■□□□□ 0.11
NKX3-1-202ENST00000523261 NRP1O14786 923 aa15.71■□□□□ 0.11
NKX3-1-202ENST00000523261 DHX15O43143 795 aaKnown RBP15.71■□□□□ 0.11
NKX3-1-202ENST00000523261 GAS2O43903 313 aaKnown RBP15.71■□□□□ 0.11
NKX3-1-202ENST00000523261 ZNF623O75123 536 aa15.71■□□□□ 0.11
NKX3-1-202ENST00000523261 EFEMP2O95967 443 aa15.71■□□□□ 0.11
NKX3-1-202ENST00000523261 SKIP12755 728 aa15.71■□□□□ 0.11
NKX3-1-202ENST00000523261 ADCY1Q08828 1119 aa15.71■□□□□ 0.11
NKX3-1-202ENST00000523261 SIM2Q14190 667 aaPredicted RBP15.71■□□□□ 0.11
NKX3-1-202ENST00000523261 CWC27Q6UX04 472 aaKnown RBP15.71■□□□□ 0.11
NKX3-1-202ENST00000523261 CATIPQ7Z7H3 387 aa15.71■□□□□ 0.11
NKX3-1-202ENST00000523261 PALB2Q86YC2 1186 aa15.71■□□□□ 0.11
NKX3-1-202ENST00000523261 RNF168Q8IYW5 571 aaPredicted RBP15.71■□□□□ 0.11
NKX3-1-202ENST00000523261 SCLT1Q96NL6 688 aa15.71■□□□□ 0.11
NKX3-1-202ENST00000523261 MARCH5Q9NX47 278 aa15.71■□□□□ 0.11
NKX3-1-202ENST00000523261 DSPP15924 2871 aaKnown RBP15.71■□□□□ 0.11
NKX3-1-202ENST00000523261 ERICH2A1L162 156 aa15.7■□□□□ 0.1
NKX3-1-202ENST00000523261 TGM5O43548 720 aa15.7■□□□□ 0.1
NKX3-1-202ENST00000523261 GLUD2P49448 558 aa15.7■□□□□ 0.1
NKX3-1-202ENST00000523261 AFF1P51825 1210 aaKnown RBP15.7■□□□□ 0.1
NKX3-1-202ENST00000523261 ANKRD45Q5TZF3 282 aa15.7■□□□□ 0.1
NKX3-1-202ENST00000523261 LILRA6Q6PI73 481 aa15.7■□□□□ 0.1
NKX3-1-202ENST00000523261 LRSAM1Q6UWE0 723 aa15.7■□□□□ 0.1
NKX3-1-202ENST00000523261 ZNF852Q6ZMS4 543 aa15.7■□□□□ 0.1
NKX3-1-202ENST00000523261 AGMOQ6ZNB7 445 aa15.7■□□□□ 0.1
NKX3-1-202ENST00000523261 ZNF687Q8N1G0 1237 aa15.7■□□□□ 0.1
NKX3-1-202ENST00000523261 URGCPQ8TCY9 931 aa15.7■□□□□ 0.1
NKX3-1-202ENST00000523261 NLRP7Q8WX94 980 aa15.7■□□□□ 0.1
NKX3-1-202ENST00000523261 FGF13Q92913 245 aa15.7■□□□□ 0.1
NKX3-1-202ENST00000523261 KXD1Q9BQD3 176 aa15.7■□□□□ 0.1
NKX3-1-202ENST00000523261 CHRDQ9H2X0 955 aa15.7■□□□□ 0.1
NKX3-1-202ENST00000523261 ZMYND10O75800 440 aa15.69■□□□□ 0.1
NKX3-1-202ENST00000523261 PLEKHA8P1O95397 391 aa15.69■□□□□ 0.1
NKX3-1-202ENST00000523261 RAB27AP51159 221 aa15.69■□□□□ 0.1
NKX3-1-202ENST00000523261 NTHL1P78549 312 aa15.69■□□□□ 0.1
NKX3-1-202ENST00000523261 DSG1Q02413 1049 aa15.69■□□□□ 0.1
NKX3-1-202ENST00000523261 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.69■□□□□ 0.1
NKX3-1-202ENST00000523261 GRASPQ7Z6J2 395 aaPredicted RBP15.69■□□□□ 0.1
NKX3-1-202ENST00000523261 SRBD1Q8N5C6 995 aaKnown RBP15.69■□□□□ 0.1
NKX3-1-202ENST00000523261 PGBD1Q96JS3 809 aa15.69■□□□□ 0.1
NKX3-1-202ENST00000523261 MAP3K14Q99558 947 aa15.69■□□□□ 0.1
NKX3-1-202ENST00000523261 PHF20Q9BVI0 1012 aa15.69■□□□□ 0.1
NKX3-1-202ENST00000523261 PIN4Q9Y237 131 aaKnown RBP15.69■□□□□ 0.1
NKX3-1-202ENST00000523261 MRPS17Q9Y2R5 130 aaKnown RBP15.69■□□□□ 0.1
NKX3-1-202ENST00000523261 PRG3Q9Y2Y8 225 aaPredicted RBP15.69■□□□□ 0.1
NKX3-1-202ENST00000523261 NBEAQ8NFP9 2946 aa15.68■□□□□ 0.1
NKX3-1-202ENST00000523261 HRO43593 1189 aa15.68■□□□□ 0.1
NKX3-1-202ENST00000523261 KCNK5O95279 499 aa15.68■□□□□ 0.1
NKX3-1-202ENST00000523261 TRDNQ13061 729 aa15.68■□□□□ 0.1
NKX3-1-202ENST00000523261 PPP2R5DQ14738 602 aa15.68■□□□□ 0.1
NKX3-1-202ENST00000523261 AASDHQ4L235 1098 aaPredicted RBP15.68■□□□□ 0.1
NKX3-1-202ENST00000523261 CTCFLQ8NI51 663 aaPredicted RBP15.68■□□□□ 0.1
NKX3-1-202ENST00000523261 FAM193BQ96PV7 902 aaPredicted RBP15.68■□□□□ 0.1
NKX3-1-202ENST00000523261 LZTS2Q9BRK4 669 aa15.68■□□□□ 0.1
NKX3-1-202ENST00000523261 TMEM121BQ9BXQ6 578 aaPredicted RBP15.68■□□□□ 0.1
NKX3-1-202ENST00000523261 GCOM2Q9BZD3 368 aaPredicted RBP15.68■□□□□ 0.1
NKX3-1-202ENST00000523261 HEBP1Q9NRV9 189 aa15.68■□□□□ 0.1
NKX3-1-202ENST00000523261 CHST7Q9NS84 486 aa15.68■□□□□ 0.1
NKX3-1-202ENST00000523261 ZBTB47Q9UFB7 747 aaPredicted RBP15.68■□□□□ 0.1
NKX3-1-202ENST00000523261 GREB1Q4ZG55 1949 aa15.68■□□□□ 0.1
NKX3-1-202ENST00000523261 WDR81Q562E7 1941 aa15.67■□□□□ 0.1
NKX3-1-202ENST00000523261 hCG_1642624A0A1W2PR95 340 aa15.67■□□□□ 0.1
NKX3-1-202ENST00000523261 SRRM3A6NNA2 597 aaPredicted RBP15.67■□□□□ 0.1
NKX3-1-202ENST00000523261 SFPQP23246 707 aaKnown RBP eCLIP15.67■□□□□ 0.1
NKX3-1-202ENST00000523261 RING1Q06587 406 aa15.67■□□□□ 0.1
NKX3-1-202ENST00000523261 SRSF5Q13243 272 aaKnown RBP15.67■□□□□ 0.1
NKX3-1-202ENST00000523261 NIPA1Q7RTP0 329 aa15.67■□□□□ 0.1
NKX3-1-202ENST00000523261 CMTR1Q8N1G2 835 aaKnown RBP15.67■□□□□ 0.1
NKX3-1-202ENST00000523261 ITFG1Q8TB96 612 aa15.67■□□□□ 0.1
NKX3-1-202ENST00000523261 PGBD4Q96DM1 585 aa15.67■□□□□ 0.1
NKX3-1-202ENST00000523261 FAM167AQ96KS9 214 aa15.67■□□□□ 0.1
NKX3-1-202ENST00000523261 IER2Q9BTL4 223 aa15.67■□□□□ 0.1
NKX3-1-202ENST00000523261 RSAD1Q9HA92 442 aa15.67■□□□□ 0.1
NKX3-1-202ENST00000523261 RXFP3Q9NSD7 469 aa15.67■□□□□ 0.1
NKX3-1-202ENST00000523261 DIAPH3Q9NSV4 1193 aa15.67■□□□□ 0.1
NKX3-1-202ENST00000523261 KANSL3Q9P2N6 904 aa15.67■□□□□ 0.1
NKX3-1-202ENST00000523261 GABBR1Q9UBS5 961 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms