RNA–Protein interactions for RNA: ENST00000518743.1

HMGB1P23-201, Transcript of high mobility group box 1 pseudogene 23, humanhuman

BASIC

Gene HMGB1P23, Length 568 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P23-201ENST00000518743 IL33O95760 270 aa5.84□□□□□ -1.47
HMGB1P23-201ENST00000518743 IFIT2P09913 472 aaKnown RBP5.84□□□□□ -1.47
HMGB1P23-201ENST00000518743 MTHFD2P13995 350 aa5.84□□□□□ -1.47
HMGB1P23-201ENST00000518743 KRT15P19012 456 aa5.84□□□□□ -1.47
HMGB1P23-201ENST00000518743 ADMP35318 185 aa5.84□□□□□ -1.47
HMGB1P23-201ENST00000518743 FNTBP49356 437 aa5.84□□□□□ -1.47
HMGB1P23-201ENST00000518743 KIF11P52732 1056 aa5.84□□□□□ -1.47
HMGB1P23-201ENST00000518743 SMAD3P84022 425 aaKnown RBP5.84□□□□□ -1.47
HMGB1P23-201ENST00000518743 SREBF2Q12772 1141 aa5.84□□□□□ -1.47
HMGB1P23-201ENST00000518743 TCIRG1Q13488 830 aa5.84□□□□□ -1.47
HMGB1P23-201ENST00000518743 ZRSR2Q15696 482 aaKnown RBP5.84□□□□□ -1.47
HMGB1P23-201ENST00000518743 SMAD2Q15796 467 aaKnown RBP5.84□□□□□ -1.47
HMGB1P23-201ENST00000518743 TMEM31Q5JXX7 168 aa5.84□□□□□ -1.47
HMGB1P23-201ENST00000518743 CREB3L3Q68CJ9 461 aa5.84□□□□□ -1.47
HMGB1P23-201ENST00000518743 OLFM4Q6UX06 510 aa5.84□□□□□ -1.47
HMGB1P23-201ENST00000518743 TSHZ1Q6ZSZ6 1077 aa5.84□□□□□ -1.47
HMGB1P23-201ENST00000518743 OSTM1Q86WC4 334 aa5.84□□□□□ -1.47
HMGB1P23-201ENST00000518743 CREG2Q8IUH2 290 aa5.84□□□□□ -1.47
HMGB1P23-201ENST00000518743 CMTR2Q8IYT2 770 aaKnown RBP5.84□□□□□ -1.47
HMGB1P23-201ENST00000518743 FBXL6Q8N531 539 aa5.84□□□□□ -1.47
HMGB1P23-201ENST00000518743 E2F7Q96AV8 911 aa5.84□□□□□ -1.47
HMGB1P23-201ENST00000518743 MFSD14AQ96MC6 490 aa5.84□□□□□ -1.47
HMGB1P23-201ENST00000518743 BRIP1Q9BX63 1249 aa5.84□□□□□ -1.47
HMGB1P23-201ENST00000518743 ZDHHC5Q9C0B5 715 aa5.84□□□□□ -1.47
HMGB1P23-201ENST00000518743 CDIP1Q9H305 208 aa5.84□□□□□ -1.47
HMGB1P23-201ENST00000518743 SLC6A20Q9NP91 592 aa5.84□□□□□ -1.47
HMGB1P23-201ENST00000518743 MAN1C1Q9NR34 630 aa5.84□□□□□ -1.47
HMGB1P23-201ENST00000518743 C1orf112Q9NSG2 853 aa5.84□□□□□ -1.47
HMGB1P23-201ENST00000518743 PCDHA11Q9Y5I1 949 aa5.84□□□□□ -1.47
HMGB1P23-201ENST00000518743 ATP23Q9Y6H3 246 aa5.84□□□□□ -1.47
HMGB1P23-201ENST00000518743 KDRP35968 1356 aa5.83□□□□□ -1.48
HMGB1P23-201ENST00000518743 ANO9A1A5B4 782 aa5.83□□□□□ -1.48
HMGB1P23-201ENST00000518743 HMGB1P1B2RPK0 211 aaPredicted RBP5.83□□□□□ -1.48
HMGB1P23-201ENST00000518743 ADM5C9JUS6 153 aa5.83□□□□□ -1.48
HMGB1P23-201ENST00000518743 MSTNO14793 375 aa5.83□□□□□ -1.48
HMGB1P23-201ENST00000518743 TGM5O43548 720 aa5.83□□□□□ -1.48
HMGB1P23-201ENST00000518743 ZBTB48P10074 688 aaPredicted RBP5.83□□□□□ -1.48
HMGB1P23-201ENST00000518743 KIR2DL1P43626 348 aaPredicted RBP5.83□□□□□ -1.48
HMGB1P23-201ENST00000518743 KIR2DL2P43627 348 aaPredicted RBP5.83□□□□□ -1.48
HMGB1P23-201ENST00000518743 AMPHP49418 695 aa5.83□□□□□ -1.48
HMGB1P23-201ENST00000518743 TEKQ02763 1124 aa5.83□□□□□ -1.48
HMGB1P23-201ENST00000518743 NFIAQ12857 509 aa5.83□□□□□ -1.48
HMGB1P23-201ENST00000518743 CLUL1Q15846 466 aa5.83□□□□□ -1.48
HMGB1P23-201ENST00000518743 MBLAC2Q68D91 279 aa5.83□□□□□ -1.48
HMGB1P23-201ENST00000518743 PRR23CQ6ZRP0 262 aa5.83□□□□□ -1.48
HMGB1P23-201ENST00000518743 CABP7Q86V35 215 aa5.83□□□□□ -1.48
HMGB1P23-201ENST00000518743 TRIM48Q8IWZ4 208 aa5.83□□□□□ -1.48
HMGB1P23-201ENST00000518743 PHOSPHO1Q8TCT1 267 aa5.83□□□□□ -1.48
HMGB1P23-201ENST00000518743 USP33Q8TEY7 942 aa5.83□□□□□ -1.48
HMGB1P23-201ENST00000518743 LMBR1Q8WVP7 490 aa5.83□□□□□ -1.48
HMGB1P23-201ENST00000518743 MYLIPQ8WY64 445 aa5.83□□□□□ -1.48
HMGB1P23-201ENST00000518743 IP6K1Q92551 441 aa5.83□□□□□ -1.48
HMGB1P23-201ENST00000518743 MISP3Q96FF7 219 aa5.83□□□□□ -1.48
HMGB1P23-201ENST00000518743 MASTLQ96GX5 879 aa5.83□□□□□ -1.48
HMGB1P23-201ENST00000518743 CCDC120Q96HB5 630 aa5.83□□□□□ -1.48
HMGB1P23-201ENST00000518743 MAML3Q96JK9 1138 aa5.83□□□□□ -1.48
HMGB1P23-201ENST00000518743 SARGQ9BW04 601 aa5.83□□□□□ -1.48
HMGB1P23-201ENST00000518743 SP110Q9HB58 689 aa5.83□□□□□ -1.48
HMGB1P23-201ENST00000518743 SMURF1Q9HCE7 757 aa5.83□□□□□ -1.48
HMGB1P23-201ENST00000518743 KCNH7Q9NS40 1196 aa5.83□□□□□ -1.48
HMGB1P23-201ENST00000518743 MARCH2Q9P0N8 246 aa5.83□□□□□ -1.48
HMGB1P23-201ENST00000518743 DSEQ9UL01 958 aa5.83□□□□□ -1.48
HMGB1P23-201ENST00000518743 SRPK3Q9UPE1 567 aa5.83□□□□□ -1.48
HMGB1P23-201ENST00000518743 ZNF609O15014 1411 aa5.82□□□□□ -1.48
HMGB1P23-201ENST00000518743 MAP3K19Q56UN5 1328 aa5.82□□□□□ -1.48
HMGB1P23-201ENST00000518743 TMEM82A0PJX8 343 aa5.82□□□□□ -1.48
HMGB1P23-201ENST00000518743 C22orf46C9J442 243 aa5.82□□□□□ -1.48
HMGB1P23-201ENST00000518743 KDM1AO60341 852 aa5.82□□□□□ -1.48
HMGB1P23-201ENST00000518743 EIF5BO60841 1220 aaKnown RBP5.82□□□□□ -1.48
HMGB1P23-201ENST00000518743 FARP2O94887 1054 aaPredicted RBP5.82□□□□□ -1.48
HMGB1P23-201ENST00000518743 IGHA1P01876 353 aa5.82□□□□□ -1.48
HMGB1P23-201ENST00000518743 PROCP04070 461 aa5.82□□□□□ -1.48
HMGB1P23-201ENST00000518743 SLC9A1P19634 815 aa5.82□□□□□ -1.48
HMGB1P23-201ENST00000518743 GMPSP49915 693 aaPredicted RBP5.82□□□□□ -1.48
HMGB1P23-201ENST00000518743 SCAND1P57086 179 aa5.82□□□□□ -1.48
HMGB1P23-201ENST00000518743 JAM2P57087 298 aa5.82□□□□□ -1.48
HMGB1P23-201ENST00000518743 MORC3Q14149 939 aa5.82□□□□□ -1.48
HMGB1P23-201ENST00000518743 PCBP2Q15366 365 aaKnown RBP eCLIP5.82□□□□□ -1.48
HMGB1P23-201ENST00000518743 EPHA7Q15375 998 aa5.82□□□□□ -1.48
HMGB1P23-201ENST00000518743 ARHGAP29Q52LW3 1261 aa5.82□□□□□ -1.48
HMGB1P23-201ENST00000518743 SYCP2LQ5T4T6 812 aa5.82□□□□□ -1.48
HMGB1P23-201ENST00000518743 TPH2Q8IWU9 490 aa5.82□□□□□ -1.48
HMGB1P23-201ENST00000518743 MIER2Q8N344 545 aa5.82□□□□□ -1.48
HMGB1P23-201ENST00000518743 PJA1Q8NG27 643 aa5.82□□□□□ -1.48
HMGB1P23-201ENST00000518743 UHMK1Q8TAS1 419 aaKnown RBP5.82□□□□□ -1.48
HMGB1P23-201ENST00000518743 TP53INP1Q96A56 240 aa5.82□□□□□ -1.48
HMGB1P23-201ENST00000518743 DCPSQ96C86 337 aaKnown RBP5.82□□□□□ -1.48
HMGB1P23-201ENST00000518743 HRASLS5Q96KN8 279 aa5.82□□□□□ -1.48
HMGB1P23-201ENST00000518743 ELF4Q99607 663 aaPredicted RBP5.82□□□□□ -1.48
HMGB1P23-201ENST00000518743 JAM3Q9BX67 310 aa5.82□□□□□ -1.48
HMGB1P23-201ENST00000518743 SEMA3GQ9NS98 782 aa5.82□□□□□ -1.48
HMGB1P23-201ENST00000518743 PPARGC1AQ9UBK2 798 aaKnown RBP5.82□□□□□ -1.48
HMGB1P23-201ENST00000518743 ZC3H7BQ9UGR2 993 aaKnown RBP5.82□□□□□ -1.48
HMGB1P23-201ENST00000518743 USP25Q9UHP3 1055 aa5.82□□□□□ -1.48
HMGB1P23-201ENST00000518743 ZMYND8Q9ULU4 1186 aaPredicted RBP5.82□□□□□ -1.48
HMGB1P23-201ENST00000518743 B3GALT1Q9Y5Z6 326 aa5.82□□□□□ -1.48
HMGB1P23-201ENST00000518743 TPRP12270 2363 aaKnown RBP5.81□□□□□ -1.48
HMGB1P23-201ENST00000518743 KTN1Q86UP2 1357 aaKnown RBP5.81□□□□□ -1.48
HMGB1P23-201ENST00000518743 TCF20Q9UGU0 1960 aaKnown RBP5.81□□□□□ -1.48
HMGB1P23-201ENST00000518743 MAFGO15525 162 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms