RNA–Protein interactions for RNA: ENST00000515939.1

RNU4ATAC11P-201, Transcript of RNA, U4atac small nuclear 11, pseudogene, humanhuman

BASIC

Gene RNU4ATAC11P, Length 126 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4ATAC11P-201ENST00000515939 SPG21Q9NZD8 308 aa1.37□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 PKD2L1Q9P0L9 805 aa1.37□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 WRAP73Q9P2S5 460 aaPredicted RBP1.37□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 DNMT3BQ9UBC3 853 aaKnown RBP1.37□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 DACH1Q9UI36 760 aa1.37□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 TUBE1Q9UJT0 475 aa1.37□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 KLK13Q9UKR3 277 aa1.37□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 FBXO4Q9UKT5 387 aa1.37□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 SIT1Q9Y3P8 196 aa1.37□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 GPSM3Q9Y4H4 160 aa1.37□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 TRPV2Q9Y5S1 764 aa1.37□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 SQORQ9Y6N5 450 aa1.37□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 NUMBLQ9Y6R0 609 aa1.37□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 SVILO95425 2214 aa1.37□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 RTTNQ86VV8 2226 aa1.37□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 ZFC3H1O60293 1989 aaKnown RBP1.37□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 ZNF469Q96JG9 3925 aaPredicted RBP1.37□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 ABCA4P78363 2273 aa1.37□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 PKDREJQ9NTG1 2253 aa1.37□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 ABCA2Q9BZC7 2435 aa1.37□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 CLUHO75153 1309 aa1.37□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 ABCB11O95342 1321 aa1.37□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 LRRK1Q38SD2 2015 aa1.37□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 SEC16AO15027 2179 aa1.37□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 ESPL1Q14674 2120 aa1.36□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 ZGRF1Q86YA3 2104 aa1.36□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 IGKV6-21A0A0C4DH24 114 aa1.36□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 A0A0U1RQF3 1178 aa1.36□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP1.36□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 FAM221BA6H8Z2 402 aa1.36□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 FAM170BA6NMN3 283 aa1.36□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 SOBPA7XYQ1 873 aa1.36□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 PATE3B3GLJ2 98 aa1.36□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 KLRF2D3W0D1 207 aa1.36□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 FAM86B1E9PN63 330 aa1.36□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 GCOM1H8Y6P7 765 aaPredicted RBP1.36□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 PIK3CDO00329 1044 aa1.36□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 MEIS1O00470 390 aa1.36□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 NRP1O14786 923 aa1.36□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 ZBTB39O15060 712 aa1.36□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 ZBTB5O15062 677 aa1.36□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 DCLK1O15075 740 aa1.36□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 INPPL1O15357 1258 aa1.36□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 FIBPO43427 364 aa1.36□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 TGM5O43548 720 aa1.36□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 HYAL3O43820 417 aaPredicted RBP1.36□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 EXTL3O43909 919 aa1.36□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 TBC1D4O60343 1298 aa1.36□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 DTNBO60941 627 aa1.36□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 ZNF623O75123 536 aa1.36□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 RAB11FIP3O75154 756 aa1.36□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 RPS6KA5O75582 802 aa1.36□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 SEC24AO95486 1093 aa1.36□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 APPP05067 770 aa1.36□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 SSBP05455 408 aaKnown RBP eCLIP1.36□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 RETP07949 1114 aa1.36□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 HNRNPA1P09651 372 aaKnown RBP eCLIP1.36□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 IFIT2P09913 472 aaKnown RBP1.36□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 FAM86B2P0C5J1 330 aa1.36□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 ZNF806P0C7X5 589 aa1.36□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 POLR2MP0CAP2 368 aa1.36□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 KRT10P13645 584 aa1.36□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 DARSP14868 501 aaKnown RBP1.36□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 CEBPBP17676 345 aa1.36□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 LAG3P18627 525 aa1.36□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 GNAT2P19087 354 aa1.36□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 RXRAP19793 462 aa1.36□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 CCND2P30279 289 aa1.36□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 PHKA2P46019 1235 aa1.36□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 SOX9P48436 509 aa1.36□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 PXNP49023 591 aaPredicted RBP1.36□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 CLK2P49760 499 aaKnown RBP1.36□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 GPC3P51654 580 aa1.36□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 CLCN3P51790 818 aa1.36□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 LIMK1P53667 647 aa1.36□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 CRYBB1P53674 252 aaPredicted RBP1.36□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 PDE1AP54750 535 aa1.36□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 NLRP11P59045 1033 aaKnown RBP1.36□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 KRT76Q01546 638 aa1.36□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 CACNB1Q02641 598 aaPredicted RBP1.36□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 SRSF1Q07955 248 aaKnown RBP eCLIP1.36□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 DSC1Q08554 894 aa1.36□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 MESP2Q0VG99 397 aa1.36□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 AKAP6Q13023 2319 aa1.36□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 IKQ13123 557 aaPredicted RBP1.36□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 PAK2Q13177 524 aa1.36□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 SMC1AQ14683 1233 aaKnown RBP1.36□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 MLF2Q15773 248 aaPredicted RBP1.36□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 CSRP2Q16527 193 aa1.36□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 AMHR2Q16671 573 aa1.36□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 COL28A1Q2UY09 1125 aa1.36□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 GAB4Q2WGN9 574 aa1.36□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 BRDTQ58F21 947 aaPredicted RBP1.36□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 PRSS36Q5K4E3 855 aa1.36□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 RTP2Q5QGT7 225 aa1.36□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 ATAT1Q5SQI0 421 aa1.36□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 STPG1Q5TH74 334 aa1.36□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 PDE12Q6L8Q7 609 aaKnown RBP1.36□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 TAF2Q6P1X5 1199 aa1.36□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 XRRA1Q6P2D8 792 aa1.36□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 316.3 ms