RNA–Protein interactions for RNA: ENST00000508466.1

LIMCH1-207, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 2

Gene LIMCH1, Length 3,051 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-207ENST00000508466 DYNC1LI1Q9Y6G9 523 aaKnown RBP7.77□□□□□ -1.16
LIMCH1-207ENST00000508466 A2ML1A8K2U0 1454 aa7.77□□□□□ -1.16
LIMCH1-207ENST00000508466 UTYO14607 1347 aa7.77□□□□□ -1.17
LIMCH1-207ENST00000508466 DLC1Q96QB1 1528 aa7.77□□□□□ -1.17
LIMCH1-207ENST00000508466 ROBO2Q9HCK4 1378 aa7.77□□□□□ -1.17
LIMCH1-207ENST00000508466 GSTTP1A0A1W2PQM5 241 aa7.77□□□□□ -1.17
LIMCH1-207ENST00000508466 KIAA0391O15091 583 aaKnown RBP7.77□□□□□ -1.17
LIMCH1-207ENST00000508466 PJA2O43164 708 aa7.77□□□□□ -1.17
LIMCH1-207ENST00000508466 LDHAP00338 332 aaKnown RBP7.77□□□□□ -1.17
LIMCH1-207ENST00000508466 COL6A2P12110 1019 aa7.77□□□□□ -1.17
LIMCH1-207ENST00000508466 MARK3P27448 753 aa7.77□□□□□ -1.17
LIMCH1-207ENST00000508466 ALDH1B1P30837 517 aa7.77□□□□□ -1.17
LIMCH1-207ENST00000508466 MAP7D1Q3KQU3 841 aa7.77□□□□□ -1.17
LIMCH1-207ENST00000508466 AKAP4Q5JQC9 854 aa7.77□□□□□ -1.17
LIMCH1-207ENST00000508466 RBM44Q6ZP01 1051 aaKnown RBP7.77□□□□□ -1.17
LIMCH1-207ENST00000508466 ZNF662Q6ZS27 426 aa7.77□□□□□ -1.17
LIMCH1-207ENST00000508466 FBXL16Q8N461 479 aa7.77□□□□□ -1.17
LIMCH1-207ENST00000508466 SEC14L1Q92503 715 aa7.77□□□□□ -1.17
LIMCH1-207ENST00000508466 CCDC124Q96CT7 223 aaKnown RBP7.77□□□□□ -1.17
LIMCH1-207ENST00000508466 CLIP3Q96DZ5 547 aa7.77□□□□□ -1.17
LIMCH1-207ENST00000508466 MMTAG2Q9BU76 263 aaKnown RBP7.77□□□□□ -1.17
LIMCH1-207ENST00000508466 CDC42EP4Q9H3Q1 356 aaKnown RBP7.77□□□□□ -1.17
LIMCH1-207ENST00000508466 SMYD3Q9H7B4 428 aa7.77□□□□□ -1.17
LIMCH1-207ENST00000508466 ZFP69BQ9UJL9 534 aa7.77□□□□□ -1.17
LIMCH1-207ENST00000508466 PEAK1Q9H792 1746 aa7.77□□□□□ -1.17
LIMCH1-207ENST00000508466 CCDC194A0A1B0GVG4 234 aa7.77□□□□□ -1.17
LIMCH1-207ENST00000508466 POTEMA6NI47 508 aa7.77□□□□□ -1.17
LIMCH1-207ENST00000508466 LRRN2O75325 713 aa7.77□□□□□ -1.17
LIMCH1-207ENST00000508466 TRPA1O75762 1119 aa7.77□□□□□ -1.17
LIMCH1-207ENST00000508466 RHOBTB3O94955 611 aa7.77□□□□□ -1.17
LIMCH1-207ENST00000508466 GJB6O95452 261 aa7.77□□□□□ -1.17
LIMCH1-207ENST00000508466 ASLP04424 464 aa7.77□□□□□ -1.17
LIMCH1-207ENST00000508466 LIFRP42702 1097 aa7.77□□□□□ -1.17
LIMCH1-207ENST00000508466 KPNA1P52294 538 aaPredicted RBP7.77□□□□□ -1.17
LIMCH1-207ENST00000508466 POLGP54098 1239 aaPredicted RBP7.77□□□□□ -1.17
LIMCH1-207ENST00000508466 DYNLL1P63167 89 aaKnown RBP7.77□□□□□ -1.17
LIMCH1-207ENST00000508466 MECOMQ03112 1051 aa7.77□□□□□ -1.17
LIMCH1-207ENST00000508466 MAN2A1Q16706 1144 aa7.77□□□□□ -1.17
LIMCH1-207ENST00000508466 SLC44A4Q53GD3 710 aa7.77□□□□□ -1.17
LIMCH1-207ENST00000508466 SYCP2LQ5T4T6 812 aa7.77□□□□□ -1.17
LIMCH1-207ENST00000508466 TMEM214Q6NUQ4 689 aaKnown RBP7.77□□□□□ -1.17
LIMCH1-207ENST00000508466 IYDQ6PHW0 289 aa7.77□□□□□ -1.17
LIMCH1-207ENST00000508466 KCNK18Q7Z418 384 aa7.77□□□□□ -1.17
LIMCH1-207ENST00000508466 RNF168Q8IYW5 571 aaPredicted RBP7.77□□□□□ -1.17
LIMCH1-207ENST00000508466 SLC35G2Q8TBE7 412 aa7.77□□□□□ -1.17
LIMCH1-207ENST00000508466 ACTRT1Q8TDG2 376 aa7.77□□□□□ -1.17
LIMCH1-207ENST00000508466 CENPTQ96BT3 561 aa7.77□□□□□ -1.17
LIMCH1-207ENST00000508466 ARHGEF26Q96DR7 871 aa7.77□□□□□ -1.17
LIMCH1-207ENST00000508466 CORO1BQ9BR76 489 aa7.77□□□□□ -1.17
LIMCH1-207ENST00000508466 KLHL4Q9C0H6 718 aa7.77□□□□□ -1.17
LIMCH1-207ENST00000508466 DCLRE1BQ9H816 532 aa7.77□□□□□ -1.17
LIMCH1-207ENST00000508466 TCP11L1Q9NUJ3 509 aa7.77□□□□□ -1.17
LIMCH1-207ENST00000508466 TXLNGQ9NUQ3 528 aa7.77□□□□□ -1.17
LIMCH1-207ENST00000508466 NKIRAS1Q9NYS0 192 aa7.77□□□□□ -1.17
LIMCH1-207ENST00000508466 EFR3BQ9Y2G0 817 aa7.77□□□□□ -1.17
LIMCH1-207ENST00000508466 A0A1B0GTW7 788 aa7.76□□□□□ -1.17
LIMCH1-207ENST00000508466 ANKRD62A6NC57 917 aa7.76□□□□□ -1.17
LIMCH1-207ENST00000508466 RASA4BC9J798 803 aa7.76□□□□□ -1.17
LIMCH1-207ENST00000508466 RASA4O43374 803 aa7.76□□□□□ -1.17
LIMCH1-207ENST00000508466 PEX1O43933 1283 aa7.76□□□□□ -1.17
LIMCH1-207ENST00000508466 ZNF862O60290 1169 aa7.76□□□□□ -1.17
LIMCH1-207ENST00000508466 DKC1O60832 514 aaKnown RBP eCLIP7.76□□□□□ -1.17
LIMCH1-207ENST00000508466 CALCAP01258 141 aa7.76□□□□□ -1.17
LIMCH1-207ENST00000508466 KITP10721 976 aa7.76□□□□□ -1.17
LIMCH1-207ENST00000508466 CCNG1P51959 295 aa7.76□□□□□ -1.17
LIMCH1-207ENST00000508466 GALCP54803 685 aa7.76□□□□□ -1.17
LIMCH1-207ENST00000508466 LSAMPQ13449 338 aa7.76□□□□□ -1.17
LIMCH1-207ENST00000508466 NCOA4Q13772 614 aa7.76□□□□□ -1.17
LIMCH1-207ENST00000508466 ARHGAP44Q17R89 818 aa7.76□□□□□ -1.17
LIMCH1-207ENST00000508466 RABL6Q3YEC7 729 aaPredicted RBP7.76□□□□□ -1.17
LIMCH1-207ENST00000508466 ANKDD1AQ495B1 522 aa7.76□□□□□ -1.17
LIMCH1-207ENST00000508466 NSMFQ6X4W1 530 aa7.76□□□□□ -1.17
LIMCH1-207ENST00000508466 RAPH1Q70E73 1250 aa7.76□□□□□ -1.17
LIMCH1-207ENST00000508466 TRMT1LQ7Z2T5 733 aaKnown RBP7.76□□□□□ -1.17
LIMCH1-207ENST00000508466 ADGRA1Q86SQ6 560 aa7.76□□□□□ -1.17
LIMCH1-207ENST00000508466 TREML1Q86YW5 311 aa7.76□□□□□ -1.17
LIMCH1-207ENST00000508466 TTC5Q8N0Z6 440 aa7.76□□□□□ -1.17
LIMCH1-207ENST00000508466 CKAP2Q8WWK9 683 aa7.76□□□□□ -1.17
LIMCH1-207ENST00000508466 NR1H4Q96RI1 486 aaPredicted RBP7.76□□□□□ -1.17
LIMCH1-207ENST00000508466 FNBP1Q96RU3 617 aa7.76□□□□□ -1.17
LIMCH1-207ENST00000508466 GRIP2Q9C0E4 1043 aa7.76□□□□□ -1.17
LIMCH1-207ENST00000508466 UBAP1Q9NZ09 502 aa7.76□□□□□ -1.17
LIMCH1-207ENST00000508466 GRHL1Q9NZI5 618 aa7.76□□□□□ -1.17
LIMCH1-207ENST00000508466 SPATA7Q9P0W8 599 aa7.76□□□□□ -1.17
LIMCH1-207ENST00000508466 CTTNBP2NLQ9P2B4 639 aa7.76□□□□□ -1.17
LIMCH1-207ENST00000508466 TUBGCP4Q9UGJ1 667 aa7.76□□□□□ -1.17
LIMCH1-207ENST00000508466 SEC63Q9UGP8 760 aaKnown RBP7.76□□□□□ -1.17
LIMCH1-207ENST00000508466 NAGPAQ9UK23 515 aa7.76□□□□□ -1.17
LIMCH1-207ENST00000508466 APPL1Q9UKG1 709 aa7.76□□□□□ -1.17
LIMCH1-207ENST00000508466 NAALADL1Q9UQQ1 740 aa7.76□□□□□ -1.17
LIMCH1-207ENST00000508466 ZNF148Q9UQR1 794 aa7.76□□□□□ -1.17
LIMCH1-207ENST00000508466 AXIN2Q9Y2T1 843 aa7.76□□□□□ -1.17
LIMCH1-207ENST00000508466 CRYBG1Q9Y4K1 1723 aa7.76□□□□□ -1.17
LIMCH1-207ENST00000508466 SRRM3A6NNA2 597 aaPredicted RBP7.76□□□□□ -1.17
LIMCH1-207ENST00000508466 MEI4A8MW99 385 aa7.76□□□□□ -1.17
LIMCH1-207ENST00000508466 BANF1O75531 89 aa7.76□□□□□ -1.17
LIMCH1-207ENST00000508466 PSMG1O95456 288 aa7.76□□□□□ -1.17
LIMCH1-207ENST00000508466 AGTP01019 485 aa7.76□□□□□ -1.17
LIMCH1-207ENST00000508466 DLATP10515 647 aaKnown RBP7.76□□□□□ -1.17
LIMCH1-207ENST00000508466 CCNB1P14635 433 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 105.9 ms