RNA–Protein interactions for RNA: ENST00000504387.5

NEDD9-208, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NEDD9, Length 3,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-208ENST00000504387 C2orf71A6NGG8 1288 aa8.19□□□□□ -1.1
NEDD9-208ENST00000504387 GOLGA8RI6L899 631 aa8.19□□□□□ -1.1
NEDD9-208ENST00000504387 CLDN3O15551 220 aa8.19□□□□□ -1.1
NEDD9-208ENST00000504387 THAP12O43422 761 aa8.19□□□□□ -1.1
NEDD9-208ENST00000504387 PYGMP11217 842 aa8.19□□□□□ -1.1
NEDD9-208ENST00000504387 PECAM1P16284 738 aaPredicted RBP8.19□□□□□ -1.1
NEDD9-208ENST00000504387 POLD1P28340 1107 aa8.19□□□□□ -1.1
NEDD9-208ENST00000504387 BNIP1Q12981 228 aa8.19□□□□□ -1.1
NEDD9-208ENST00000504387 GRM4Q14833 912 aa8.19□□□□□ -1.1
NEDD9-208ENST00000504387 EPC2Q52LR7 807 aa8.19□□□□□ -1.1
NEDD9-208ENST00000504387 MFSD14BQ5SR56 506 aa8.19□□□□□ -1.1
NEDD9-208ENST00000504387 PRELID2Q8N945 189 aa8.19□□□□□ -1.1
NEDD9-208ENST00000504387 CYTH2Q99418 400 aa8.19□□□□□ -1.1
NEDD9-208ENST00000504387 RAB34Q9BZG1 259 aa8.19□□□□□ -1.1
NEDD9-208ENST00000504387 NT5C3AQ9H0P0 336 aa8.19□□□□□ -1.1
NEDD9-208ENST00000504387 NUCKS1Q9H1E3 243 aaKnown RBP8.19□□□□□ -1.1
NEDD9-208ENST00000504387 SERPINA10Q9UK55 444 aa8.19□□□□□ -1.1
NEDD9-208ENST00000504387 DNAJC12Q9UKB3 198 aa8.19□□□□□ -1.1
NEDD9-208ENST00000504387 ARL2BPQ9Y2Y0 163 aa8.19□□□□□ -1.1
NEDD9-208ENST00000504387 NMT1P30419 496 aaKnown RBP8.18□□□□□ -1.1
NEDD9-208ENST00000504387 PTDSS1P48651 473 aaKnown RBP8.18□□□□□ -1.1
NEDD9-208ENST00000504387 CDK8P49336 464 aa8.18□□□□□ -1.1
NEDD9-208ENST00000504387 RAB27AP51159 221 aa8.18□□□□□ -1.1
NEDD9-208ENST00000504387 GTF2IP78347 998 aa8.18□□□□□ -1.1
NEDD9-208ENST00000504387 CRELD2Q6UXH1 353 aaPredicted RBP8.18□□□□□ -1.1
NEDD9-208ENST00000504387 LMNTD2Q8IXW0 634 aa8.18□□□□□ -1.1
NEDD9-208ENST00000504387 LINC00116Q8NCU8 138 aa8.18□□□□□ -1.1
NEDD9-208ENST00000504387 SLC30A5Q8TAD4 765 aa8.18□□□□□ -1.1
NEDD9-208ENST00000504387 TRIM7Q9C029 511 aa8.18□□□□□ -1.1
NEDD9-208ENST00000504387 TRIM4Q9C037 500 aa8.18□□□□□ -1.1
NEDD9-208ENST00000504387 NKIRAS1Q9NYS0 192 aa8.18□□□□□ -1.1
NEDD9-208ENST00000504387 GRHL1Q9NZI5 618 aa8.18□□□□□ -1.1
NEDD9-208ENST00000504387 PKD2L1Q9P0L9 805 aa8.18□□□□□ -1.1
NEDD9-208ENST00000504387 RASAL2Q9UJF2 1139 aa8.18□□□□□ -1.1
NEDD9-208ENST00000504387 TTC7AQ9ULT0 858 aaPredicted RBP8.18□□□□□ -1.1
NEDD9-208ENST00000504387 SCN11AQ9UI33 1791 aa8.18□□□□□ -1.1
NEDD9-208ENST00000504387 MED24O75448 989 aa8.18□□□□□ -1.1
NEDD9-208ENST00000504387 FTLP02792 175 aaPredicted RBP8.18□□□□□ -1.1
NEDD9-208ENST00000504387 CETPP11597 493 aa8.18□□□□□ -1.1
NEDD9-208ENST00000504387 COMTP21964 271 aa8.18□□□□□ -1.1
NEDD9-208ENST00000504387 FOXN2P32314 431 aa8.18□□□□□ -1.1
NEDD9-208ENST00000504387 GBP1P32455 592 aa8.18□□□□□ -1.1
NEDD9-208ENST00000504387 PRPHP41219 470 aa8.18□□□□□ -1.1
NEDD9-208ENST00000504387 ADCY7P51828 1080 aa8.18□□□□□ -1.1
NEDD9-208ENST00000504387 PTENP60484 403 aa8.18□□□□□ -1.1
NEDD9-208ENST00000504387 MTMR2Q13614 643 aa8.18□□□□□ -1.1
NEDD9-208ENST00000504387 PRR16Q569H4 304 aa8.18□□□□□ -1.1
NEDD9-208ENST00000504387 LLGL2Q6P1M3 1020 aa8.18□□□□□ -1.1
NEDD9-208ENST00000504387 FAM13CQ8NE31 585 aa8.18□□□□□ -1.1
NEDD9-208ENST00000504387 DYDC2Q96IM9 177 aa8.18□□□□□ -1.1
NEDD9-208ENST00000504387 SUCLA2Q9P2R7 463 aaPredicted RBP8.18□□□□□ -1.1
NEDD9-208ENST00000504387 CORO1CQ9ULV4 474 aaPredicted RBP8.18□□□□□ -1.1
NEDD9-208ENST00000504387 DISP2A7MBM2 1401 aa8.18□□□□□ -1.1
NEDD9-208ENST00000504387 LAMB4A4D0S4 1761 aa8.18□□□□□ -1.1
NEDD9-208ENST00000504387 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.18□□□□□ -1.1
NEDD9-208ENST00000504387 KIF3CO14782 793 aa8.18□□□□□ -1.1
NEDD9-208ENST00000504387 DDX3YO15523 660 aaKnown RBP8.18□□□□□ -1.1
NEDD9-208ENST00000504387 AGTP01019 485 aa8.18□□□□□ -1.1
NEDD9-208ENST00000504387 ZNF76P36508 570 aa8.18□□□□□ -1.1
NEDD9-208ENST00000504387 RWDD2BP57060 319 aa8.18□□□□□ -1.1
NEDD9-208ENST00000504387 SETDB1Q15047 1291 aa8.18□□□□□ -1.1
NEDD9-208ENST00000504387 DOK7Q18PE1 504 aa8.18□□□□□ -1.1
NEDD9-208ENST00000504387 SYCP2LQ5T4T6 812 aa8.18□□□□□ -1.1
NEDD9-208ENST00000504387 C12orf60Q5U649 245 aa8.18□□□□□ -1.1
NEDD9-208ENST00000504387 VSTM1Q6UX27 236 aa8.18□□□□□ -1.1
NEDD9-208ENST00000504387 SCYL3Q8IZE3 742 aa8.18□□□□□ -1.1
NEDD9-208ENST00000504387 SYCE1Q8N0S2 351 aa8.18□□□□□ -1.1
NEDD9-208ENST00000504387 ANKLE1Q8NAG6 615 aa8.18□□□□□ -1.1
NEDD9-208ENST00000504387 CCHCR1Q8TD31 782 aa8.18□□□□□ -1.1
NEDD9-208ENST00000504387 P3H4Q92791 437 aa8.18□□□□□ -1.1
NEDD9-208ENST00000504387 KAT5Q92993 513 aa8.18□□□□□ -1.1
NEDD9-208ENST00000504387 HES6Q96HZ4 224 aa8.18□□□□□ -1.1
NEDD9-208ENST00000504387 BHMT2Q9H2M3 363 aa8.18□□□□□ -1.1
NEDD9-208ENST00000504387 RGL1Q9NZL6 768 aa8.18□□□□□ -1.1
NEDD9-208ENST00000504387 CFAP69A5D8W1 941 aa8.17□□□□□ -1.1
NEDD9-208ENST00000504387 TISP43B9A030 160 aa8.17□□□□□ -1.1
NEDD9-208ENST00000504387 RASA4BC9J798 803 aa8.17□□□□□ -1.1
NEDD9-208ENST00000504387 GOLGA8SH3BPF8 625 aa8.17□□□□□ -1.1
NEDD9-208ENST00000504387 GOLGA8MH3BSY2 632 aa8.17□□□□□ -1.1
NEDD9-208ENST00000504387 LAD1O00515 517 aa8.17□□□□□ -1.1
NEDD9-208ENST00000504387 RASA4O43374 803 aa8.17□□□□□ -1.1
NEDD9-208ENST00000504387 GSTA1P08263 222 aa8.17□□□□□ -1.1
NEDD9-208ENST00000504387 CHRNB2P17787 502 aa8.17□□□□□ -1.1
NEDD9-208ENST00000504387 KRT15P19012 456 aa8.17□□□□□ -1.1
NEDD9-208ENST00000504387 CYP11B2P19099 503 aa8.17□□□□□ -1.1
NEDD9-208ENST00000504387 ADCY8P40145 1251 aa8.17□□□□□ -1.1
NEDD9-208ENST00000504387 PPP1R2P41236 205 aa8.17□□□□□ -1.1
NEDD9-208ENST00000504387 SERPINB4P48594 390 aa8.17□□□□□ -1.1
NEDD9-208ENST00000504387 UBXN2AP68543 259 aa8.17□□□□□ -1.1
NEDD9-208ENST00000504387 LAMB3Q13751 1172 aa8.17□□□□□ -1.1
NEDD9-208ENST00000504387 C11orf91Q3C1V1 193 aa8.17□□□□□ -1.1
NEDD9-208ENST00000504387 CERKLQ49MI3 558 aaPredicted RBP8.17□□□□□ -1.1
NEDD9-208ENST00000504387 ZCWPW2Q504Y3 356 aa8.17□□□□□ -1.1
NEDD9-208ENST00000504387 RASIP1Q5U651 963 aa8.17□□□□□ -1.1
NEDD9-208ENST00000504387 CGB2Q6NT52 195 aa8.17□□□□□ -1.1
NEDD9-208ENST00000504387 HAS1Q92839 578 aa8.17□□□□□ -1.1
NEDD9-208ENST00000504387 MKNK1Q9BUB5 465 aa8.17□□□□□ -1.1
NEDD9-208ENST00000504387 RUSC1Q9BVN2 902 aa8.17□□□□□ -1.1
NEDD9-208ENST00000504387 TBC1D10AQ9BXI6 508 aa8.17□□□□□ -1.1
NEDD9-208ENST00000504387 NPHS2Q9NP85 383 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms