RNA–Protein interactions for RNA: ENST00000504327.1

PDLIM1P4-201, Transcript of PDZ and LIM domain 1 pseudogene 4, humanhuman

BASIC

Gene PDLIM1P4, Length 1,006 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P4-201ENST00000504327 MATN2O00339 956 aa5.23□□□□□ -1.57
PDLIM1P4-201ENST00000504327 ZNF500O60304 480 aaPredicted RBP5.23□□□□□ -1.57
PDLIM1P4-201ENST00000504327 ATP2A2P16615 1042 aaKnown RBP5.23□□□□□ -1.57
PDLIM1P4-201ENST00000504327 CPEP16870 476 aa5.23□□□□□ -1.57
PDLIM1P4-201ENST00000504327 MCCP23508 829 aa5.23□□□□□ -1.57
PDLIM1P4-201ENST00000504327 MRE11P49959 708 aa5.23□□□□□ -1.57
PDLIM1P4-201ENST00000504327 GUCY2FP51841 1108 aa5.23□□□□□ -1.57
PDLIM1P4-201ENST00000504327 RAC3P60763 192 aa5.23□□□□□ -1.57
PDLIM1P4-201ENST00000504327 CNGB1Q14028 1251 aaPredicted RBP5.23□□□□□ -1.57
PDLIM1P4-201ENST00000504327 GRAMD1BQ3KR37 738 aa5.23□□□□□ -1.57
PDLIM1P4-201ENST00000504327 C10orf62Q5T681 223 aaPredicted RBP5.23□□□□□ -1.57
PDLIM1P4-201ENST00000504327 EFCAB2Q5VUJ9 269 aa5.23□□□□□ -1.57
PDLIM1P4-201ENST00000504327 TRIM68Q6AZZ1 485 aa5.23□□□□□ -1.57
PDLIM1P4-201ENST00000504327 TCTN3Q6NUS6 607 aa5.23□□□□□ -1.57
PDLIM1P4-201ENST00000504327 ZNF585AQ6P3V2 769 aa5.23□□□□□ -1.57
PDLIM1P4-201ENST00000504327 GGNQ86UU5 652 aa5.23□□□□□ -1.57
PDLIM1P4-201ENST00000504327 BCL6BQ8N143 479 aaPredicted RBP5.23□□□□□ -1.57
PDLIM1P4-201ENST00000504327 NXPE1Q8N323 547 aa5.23□□□□□ -1.57
PDLIM1P4-201ENST00000504327 DNERQ8NFT8 737 aa5.23□□□□□ -1.57
PDLIM1P4-201ENST00000504327 TTC8Q8TAM2 541 aa5.23□□□□□ -1.57
PDLIM1P4-201ENST00000504327 RUNDC1Q96C34 613 aa5.23□□□□□ -1.57
PDLIM1P4-201ENST00000504327 C16orf92Q96LL3 132 aa5.23□□□□□ -1.57
PDLIM1P4-201ENST00000504327 ELF4Q99607 663 aaPredicted RBP5.23□□□□□ -1.57
PDLIM1P4-201ENST00000504327 GPR20Q99678 358 aa5.23□□□□□ -1.57
PDLIM1P4-201ENST00000504327 DPYSL5Q9BPU6 564 aa5.23□□□□□ -1.57
PDLIM1P4-201ENST00000504327 FAM126AQ9BYI3 521 aaPredicted RBP5.23□□□□□ -1.57
PDLIM1P4-201ENST00000504327 MTFR1LQ9H019 292 aa5.23□□□□□ -1.57
PDLIM1P4-201ENST00000504327 OXSMQ9NWU1 459 aa5.23□□□□□ -1.57
PDLIM1P4-201ENST00000504327 ZIM2Q9NZV7 527 aa5.23□□□□□ -1.57
PDLIM1P4-201ENST00000504327 MAGEL2Q9UJ55 1249 aa5.23□□□□□ -1.57
PDLIM1P4-201ENST00000504327 INTUQ9ULD6 942 aa5.23□□□□□ -1.57
PDLIM1P4-201ENST00000504327 OAZ3Q9UMX2 235 aa5.23□□□□□ -1.57
PDLIM1P4-201ENST00000504327 NR2E1Q9Y466 385 aa5.23□□□□□ -1.57
PDLIM1P4-201ENST00000504327 CCDC18Q5T9S5 1454 aa5.23□□□□□ -1.57
PDLIM1P4-201ENST00000504327 TTC37Q6PGP7 1564 aa5.23□□□□□ -1.57
PDLIM1P4-201ENST00000504327 KIF14Q15058 1648 aa5.23□□□□□ -1.57
PDLIM1P4-201ENST00000504327 TROQ12816 1431 aaPredicted RBP5.23□□□□□ -1.57
PDLIM1P4-201ENST00000504327 VPS8Q8N3P4 1428 aa5.23□□□□□ -1.57
PDLIM1P4-201ENST00000504327 TBX3O15119 743 aa5.22□□□□□ -1.57
PDLIM1P4-201ENST00000504327 ARHGAP6O43182 974 aa5.22□□□□□ -1.57
PDLIM1P4-201ENST00000504327 FOXS1O43638 330 aa5.22□□□□□ -1.57
PDLIM1P4-201ENST00000504327 TRAPPC10P48553 1259 aa5.22□□□□□ -1.57
PDLIM1P4-201ENST00000504327 MEOX1P50221 254 aa5.22□□□□□ -1.57
PDLIM1P4-201ENST00000504327 RAB27AP51159 221 aa5.22□□□□□ -1.57
PDLIM1P4-201ENST00000504327 NEK2P51955 445 aa5.22□□□□□ -1.57
PDLIM1P4-201ENST00000504327 ROM1Q03395 351 aa5.22□□□□□ -1.57
PDLIM1P4-201ENST00000504327 MORC3Q14149 939 aa5.22□□□□□ -1.57
PDLIM1P4-201ENST00000504327 PCBP1Q15365 356 aaKnown RBP eCLIP5.22□□□□□ -1.57
PDLIM1P4-201ENST00000504327 TMEM95Q3KNT9 176 aa5.22□□□□□ -1.57
PDLIM1P4-201ENST00000504327 L1TD1Q5T7N2 865 aaKnown RBP5.22□□□□□ -1.57
PDLIM1P4-201ENST00000504327 PRAMEF9Q5VWM5 478 aa5.22□□□□□ -1.57
PDLIM1P4-201ENST00000504327 SLFN12LQ6IEE8 588 aa5.22□□□□□ -1.57
PDLIM1P4-201ENST00000504327 TAX1BP1Q86VP1 789 aa5.22□□□□□ -1.57
PDLIM1P4-201ENST00000504327 GIMAP8Q8ND71 665 aaPredicted RBP5.22□□□□□ -1.57
PDLIM1P4-201ENST00000504327 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.22□□□□□ -1.57
PDLIM1P4-201ENST00000504327 OR5AN1Q8NGI8 311 aa5.22□□□□□ -1.57
PDLIM1P4-201ENST00000504327 OR14K1Q8NGZ2 314 aa5.22□□□□□ -1.57
PDLIM1P4-201ENST00000504327 CFHR4Q92496 578 aa5.22□□□□□ -1.57
PDLIM1P4-201ENST00000504327 DVL3Q92997 716 aaPredicted RBP5.22□□□□□ -1.57
PDLIM1P4-201ENST00000504327 E2F7Q96AV8 911 aa5.22□□□□□ -1.57
PDLIM1P4-201ENST00000504327 MAML3Q96JK9 1138 aa5.22□□□□□ -1.57
PDLIM1P4-201ENST00000504327 WWC2-AS2Q96NR7 200 aa5.22□□□□□ -1.57
PDLIM1P4-201ENST00000504327 ORAI3Q9BRQ5 295 aa5.22□□□□□ -1.57
PDLIM1P4-201ENST00000504327 TARS2Q9BW92 718 aaKnown RBP5.22□□□□□ -1.57
PDLIM1P4-201ENST00000504327 TOMM22Q9NS69 142 aa5.22□□□□□ -1.57
PDLIM1P4-201ENST00000504327 FAM184BQ9ULE4 1060 aa5.22□□□□□ -1.57
PDLIM1P4-201ENST00000504327 TEX14Q8IWB6 1497 aa5.21□□□□□ -1.58
PDLIM1P4-201ENST00000504327 CFAP69A5D8W1 941 aa5.21□□□□□ -1.58
PDLIM1P4-201ENST00000504327 PDE8AO60658 829 aa5.21□□□□□ -1.58
PDLIM1P4-201ENST00000504327 CDC14BO60729 498 aa5.21□□□□□ -1.58
PDLIM1P4-201ENST00000504327 GAS7O60861 476 aa5.21□□□□□ -1.58
PDLIM1P4-201ENST00000504327 MAFO75444 373 aaPredicted RBP5.21□□□□□ -1.58
PDLIM1P4-201ENST00000504327 F2P00734 622 aa5.21□□□□□ -1.58
PDLIM1P4-201ENST00000504327 CYP17A1P05093 508 aa5.21□□□□□ -1.58
PDLIM1P4-201ENST00000504327 IFIT2P09913 472 aaKnown RBP5.21□□□□□ -1.58
PDLIM1P4-201ENST00000504327 INSRRP14616 1297 aa5.21□□□□□ -1.58
PDLIM1P4-201ENST00000504327 CR2P20023 1033 aa5.21□□□□□ -1.58
PDLIM1P4-201ENST00000504327 POU3F2P20265 443 aaPredicted RBP5.21□□□□□ -1.58
PDLIM1P4-201ENST00000504327 ZEB1P37275 1124 aaPredicted RBP5.21□□□□□ -1.58
PDLIM1P4-201ENST00000504327 DSG1Q02413 1049 aa5.21□□□□□ -1.58
PDLIM1P4-201ENST00000504327 MAP3K12Q12852 859 aa5.21□□□□□ -1.58
PDLIM1P4-201ENST00000504327 NFYCQ13952 458 aa5.21□□□□□ -1.58
PDLIM1P4-201ENST00000504327 EPHA7Q15375 998 aa5.21□□□□□ -1.58
PDLIM1P4-201ENST00000504327 CDSNQ15517 529 aa5.21□□□□□ -1.58
PDLIM1P4-201ENST00000504327 SEPT7Q16181 437 aaKnown RBP5.21□□□□□ -1.58
PDLIM1P4-201ENST00000504327 GFOD2Q3B7J2 385 aa5.21□□□□□ -1.58
PDLIM1P4-201ENST00000504327 INO80DQ53TQ3 878 aaPredicted RBP5.21□□□□□ -1.58
PDLIM1P4-201ENST00000504327 TTC38Q5R3I4 469 aa5.21□□□□□ -1.58
PDLIM1P4-201ENST00000504327 USP30Q70CQ3 517 aa5.21□□□□□ -1.58
PDLIM1P4-201ENST00000504327 PDILTQ8N807 584 aa5.21□□□□□ -1.58
PDLIM1P4-201ENST00000504327 Q8TCH9 128 aa5.21□□□□□ -1.58
PDLIM1P4-201ENST00000504327 CHTF18Q8WVB6 975 aa5.21□□□□□ -1.58
PDLIM1P4-201ENST00000504327 TUBGCP5Q96RT8 1024 aa5.21□□□□□ -1.58
PDLIM1P4-201ENST00000504327 C1QTNF3Q9BXJ4 246 aa5.21□□□□□ -1.58
PDLIM1P4-201ENST00000504327 LDHAL6BQ9BYZ2 381 aaPredicted RBP5.21□□□□□ -1.58
PDLIM1P4-201ENST00000504327 INO80BQ9C086 356 aaPredicted RBP5.21□□□□□ -1.58
PDLIM1P4-201ENST00000504327 KLC2Q9H0B6 622 aa5.21□□□□□ -1.58
PDLIM1P4-201ENST00000504327 OR10A2Q9H208 303 aa5.21□□□□□ -1.58
PDLIM1P4-201ENST00000504327 C12orf65Q9H3J6 166 aaKnown RBP5.21□□□□□ -1.58
PDLIM1P4-201ENST00000504327 THG1LQ9NWX6 298 aaKnown RBP5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms