RNA–Protein interactions for RNA: ENST00000486184.1

NUP50-216, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 821 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-216ENST00000486184 AXLP30530 894 aa12.53□□□□□ -0.4
NUP50-216ENST00000486184 MCM4P33991 863 aa12.53□□□□□ -0.4
NUP50-216ENST00000486184 PNOCQ13519 176 aa12.53□□□□□ -0.4
NUP50-216ENST00000486184 PRPF4BQ13523 1007 aaKnown RBP12.53□□□□□ -0.4
NUP50-216ENST00000486184 ALCAMQ13740 583 aa12.53□□□□□ -0.4
NUP50-216ENST00000486184 GPNMBQ14956 572 aa12.53□□□□□ -0.4
NUP50-216ENST00000486184 FAM26FQ5R3K3 315 aa12.53□□□□□ -0.4
NUP50-216ENST00000486184 TWF2Q6IBS0 349 aaKnown RBP12.53□□□□□ -0.4
NUP50-216ENST00000486184 APBB1IPQ7Z5R6 666 aaPredicted RBP12.53□□□□□ -0.4
NUP50-216ENST00000486184 SMARCE1Q969G3 411 aa12.53□□□□□ -0.4
NUP50-216ENST00000486184 RNPC3Q96LT9 517 aaKnown RBP12.53□□□□□ -0.4
NUP50-216ENST00000486184 GDF15Q99988 308 aa12.53□□□□□ -0.4
NUP50-216ENST00000486184 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.53□□□□□ -0.47e-6■□□□□ 9.4
NUP50-216ENST00000486184 NTPCRQ9BSD7 190 aaKnown RBP12.53□□□□□ -0.4
NUP50-216ENST00000486184 TMEM134Q9H6X4 195 aa12.53□□□□□ -0.4
NUP50-216ENST00000486184 MINDY3Q9H8M7 445 aa12.53□□□□□ -0.4
NUP50-216ENST00000486184 CHST12Q9NRB3 414 aa12.53□□□□□ -0.4
NUP50-216ENST00000486184 OLFML3Q9NRN5 406 aa12.53□□□□□ -0.4
NUP50-216ENST00000486184 AGPAT5Q9NUQ2 364 aa12.53□□□□□ -0.4
NUP50-216ENST00000486184 RMND1Q9NWS8 449 aa12.53□□□□□ -0.4
NUP50-216ENST00000486184 ARHGAP28Q9P2N2 729 aa12.53□□□□□ -0.4
NUP50-216ENST00000486184 ADGRA3Q8IWK6 1321 aa12.53□□□□□ -0.4
NUP50-216ENST00000486184 GBF1Q92538 1859 aa12.53□□□□□ -0.4
NUP50-216ENST00000486184 PTPRSQ13332 1948 aa12.52□□□□□ -0.4
NUP50-216ENST00000486184 ACKR2O00590 384 aa12.52□□□□□ -0.41
NUP50-216ENST00000486184 TSPAN1O60635 241 aa12.52□□□□□ -0.41
NUP50-216ENST00000486184 IBSPP21815 317 aaPredicted RBP12.52□□□□□ -0.41
NUP50-216ENST00000486184 NMT1P30419 496 aaKnown RBP12.52□□□□□ -0.41
NUP50-216ENST00000486184 EPHB4P54760 987 aa12.52□□□□□ -0.41
NUP50-216ENST00000486184 DPYDQ12882 1025 aa12.52□□□□□ -0.41
NUP50-216ENST00000486184 PSMD2Q13200 908 aa12.52□□□□□ -0.41
NUP50-216ENST00000486184 FAM187BQ17R55 369 aa12.52□□□□□ -0.41
NUP50-216ENST00000486184 KMT5BQ4FZB7 885 aa12.52□□□□□ -0.41
NUP50-216ENST00000486184 TMEM240Q5SV17 173 aa12.52□□□□□ -0.41
NUP50-216ENST00000486184 NOTUMQ6P988 496 aa12.52□□□□□ -0.41
NUP50-216ENST00000486184 ELOA2Q8IYF1 753 aaPredicted RBP12.52□□□□□ -0.41
NUP50-216ENST00000486184 TMEM161BQ8NDZ6 487 aa12.52□□□□□ -0.41
NUP50-216ENST00000486184 HVCN1Q96D96 273 aa12.52□□□□□ -0.41
NUP50-216ENST00000486184 FAM212AQ96EL1 285 aa12.52□□□□□ -0.41
NUP50-216ENST00000486184 ADAM2Q99965 735 aa12.52□□□□□ -0.41
NUP50-216ENST00000486184 ADPGKQ9BRR6 497 aa12.52□□□□□ -0.41
NUP50-216ENST00000486184 MRPL4Q9BYD3 311 aaKnown RBP12.52□□□□□ -0.41
NUP50-216ENST00000486184 OSBPL7Q9BZF2 842 aa12.52□□□□□ -0.41
NUP50-216ENST00000486184 TRIM6Q9C030 488 aaPredicted RBP12.52□□□□□ -0.41
NUP50-216ENST00000486184 NUP62CLQ9H1M0 184 aa12.52□□□□□ -0.41
NUP50-216ENST00000486184 C1orf112Q9NSG2 853 aa12.52□□□□□ -0.41
NUP50-216ENST00000486184 EXOC7Q9UPT5 735 aa12.52□□□□□ -0.41
NUP50-216ENST00000486184 PCDHB13Q9Y5F0 798 aa12.52□□□□□ -0.41
NUP50-216ENST00000486184 CNTNAP2Q9UHC6 1331 aa12.52□□□□□ -0.41
NUP50-216ENST00000486184 HAX1O00165 279 aa12.51□□□□□ -0.41
NUP50-216ENST00000486184 N4BP3O15049 544 aa12.51□□□□□ -0.41
NUP50-216ENST00000486184 SKIP12755 728 aa12.51□□□□□ -0.41
NUP50-216ENST00000486184 BMP8BP34820 402 aa12.51□□□□□ -0.41
NUP50-216ENST00000486184 MATR3P43243 847 aaKnown RBP eCLIP12.51□□□□□ -0.41
NUP50-216ENST00000486184 RAB27AP51159 221 aa12.51□□□□□ -0.41
NUP50-216ENST00000486184 CAMK4Q16566 473 aa12.51□□□□□ -0.41
NUP50-216ENST00000486184 PRPF38BQ5VTL8 546 aaKnown RBP12.51□□□□□ -0.41
NUP50-216ENST00000486184 C16orf59Q7L2K0 433 aa12.51□□□□□ -0.41
NUP50-216ENST00000486184 ZNF720Q7Z2F6 126 aa12.51□□□□□ -0.41
NUP50-216ENST00000486184 SYCP3Q8IZU3 236 aa12.51□□□□□ -0.41
NUP50-216ENST00000486184 HERVK_113Q902F9 699 aa12.51□□□□□ -0.41
NUP50-216ENST00000486184 CCDC51Q96ER9 411 aa12.51□□□□□ -0.41
NUP50-216ENST00000486184 CPB2Q96IY4 423 aa12.51□□□□□ -0.41
NUP50-216ENST00000486184 ACCSQ96QU6 501 aa12.51□□□□□ -0.41
NUP50-216ENST00000486184 CCDC113Q9H0I3 377 aa12.51□□□□□ -0.41
NUP50-216ENST00000486184 FZD8Q9H461 694 aa12.51□□□□□ -0.41
NUP50-216ENST00000486184 ST6GALNAC4Q9H4F1 302 aa12.51□□□□□ -0.41
NUP50-216ENST00000486184 LRFN2Q9ULH4 789 aa12.51□□□□□ -0.41
NUP50-216ENST00000486184 TBX20Q9UMR3 447 aa12.51□□□□□ -0.41
NUP50-216ENST00000486184 SLC4A7Q9Y6M7 1214 aa12.51□□□□□ -0.41
NUP50-216ENST00000486184 HNRNPDLO14979 420 aaKnown RBP12.5□□□□□ -0.41
NUP50-216ENST00000486184 B4GALT5O43286 388 aa12.5□□□□□ -0.41
NUP50-216ENST00000486184 KIF20AO95235 890 aa12.5□□□□□ -0.41
NUP50-216ENST00000486184 STAG3L1P0CL83 205 aa12.5□□□□□ -0.41
NUP50-216ENST00000486184 ARF4P18085 180 aaPredicted RBP12.5□□□□□ -0.41
NUP50-216ENST00000486184 LIG4P49917 911 aa12.5□□□□□ -0.41
NUP50-216ENST00000486184 WDR5P61964 334 aaKnown RBP12.5□□□□□ -0.41
NUP50-216ENST00000486184 GTF2BQ00403 316 aa12.5□□□□□ -0.41
NUP50-216ENST00000486184 KCNB1Q14721 858 aa12.5□□□□□ -0.41
NUP50-216ENST00000486184 SHHQ15465 462 aa12.5□□□□□ -0.41
NUP50-216ENST00000486184 ZC2HC1CQ53FD0 456 aaPredicted RBP12.5□□□□□ -0.41
NUP50-216ENST00000486184 ATF7IP2Q5U623 682 aa12.5□□□□□ -0.41
NUP50-216ENST00000486184 SLC27A1Q6PCB7 646 aa12.5□□□□□ -0.41
NUP50-216ENST00000486184 SLC24A5Q71RS6 500 aa12.5□□□□□ -0.41
NUP50-216ENST00000486184 HACE1Q8IYU2 909 aa12.5□□□□□ -0.41
NUP50-216ENST00000486184 TDHQ8IZJ6 230 aa12.5□□□□□ -0.41
NUP50-216ENST00000486184 MYOCDQ8IZQ8 938 aa12.5□□□□□ -0.41
NUP50-216ENST00000486184 GSDMAQ96QA5 445 aa12.5□□□□□ -0.41
NUP50-216ENST00000486184 SLC9A7Q96T83 725 aa12.5□□□□□ -0.41
NUP50-216ENST00000486184 TCHPQ9BT92 498 aa12.5□□□□□ -0.41
NUP50-216ENST00000486184 GTPBP4Q9BZE4 634 aaKnown RBP12.5□□□□□ -0.41
NUP50-216ENST00000486184 TSPYL2Q9H2G4 693 aaPredicted RBP12.5□□□□□ -0.41
NUP50-216ENST00000486184 TMX1Q9H3N1 280 aa12.5□□□□□ -0.41
NUP50-216ENST00000486184 CLSTN2Q9H4D0 955 aa12.5□□□□□ -0.41
NUP50-216ENST00000486184 SLC39A2Q9NP94 309 aa12.5□□□□□ -0.41
NUP50-216ENST00000486184 RGS18Q9NS28 235 aa12.5□□□□□ -0.41
NUP50-216ENST00000486184 UBE4BO95155 1302 aa12.5□□□□□ -0.41
NUP50-216ENST00000486184 CITO14578 2027 aa12.5□□□□□ -0.41
NUP50-216ENST00000486184 MKI67P46013 3256 aaKnown RBP12.5□□□□□ -0.41
NUP50-216ENST00000486184 TTC3P53804 2025 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms