RNA–Protein interactions for RNA: ENST00000478658.1

USF3-202, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene USF3, Length 8,461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-202ENST00000478658 MCCD1P59942 119 aaPredicted RBP5.74□□□□□ -1.49
USF3-202ENST00000478658 RABL6Q3YEC7 729 aaPredicted RBP5.74□□□□□ -1.49
USF3-202ENST00000478658 ATP13A5Q4VNC0 1218 aa5.74□□□□□ -1.49
USF3-202ENST00000478658 RUNDC3AQ59EK9 446 aa5.74□□□□□ -1.49
USF3-202ENST00000478658 CHRDL2Q6WN34 429 aa5.74□□□□□ -1.49
USF3-202ENST00000478658 MYLK4Q86YV6 388 aaPredicted RBP5.74□□□□□ -1.49
USF3-202ENST00000478658 PGAP3Q96FM1 320 aaPredicted RBP5.74□□□□□ -1.49
USF3-202ENST00000478658 C1QTNF7Q9BXJ2 289 aa5.74□□□□□ -1.49
USF3-202ENST00000478658 MRPL44Q9H9J2 332 aaKnown RBP5.74□□□□□ -1.49
USF3-202ENST00000478658 GINM1Q9NU53 330 aa5.74□□□□□ -1.49
USF3-202ENST00000478658 PNMA8CA0A1B0GUJ8 204 aa5.74□□□□□ -1.49
USF3-202ENST00000478658 ABL1P00519 1130 aa5.74□□□□□ -1.49
USF3-202ENST00000478658 MYL6BP14649 208 aa5.74□□□□□ -1.49
USF3-202ENST00000478658 OGNP20774 298 aaKnown RBP5.74□□□□□ -1.49
USF3-202ENST00000478658 RRM2P31350 389 aa5.74□□□□□ -1.49
USF3-202ENST00000478658 CTNNA1P35221 906 aaKnown RBP5.74□□□□□ -1.49
USF3-202ENST00000478658 TMED10P49755 219 aaKnown RBP5.74□□□□□ -1.49
USF3-202ENST00000478658 ADRM1Q16186 407 aa5.74□□□□□ -1.49
USF3-202ENST00000478658 TCP11X2Q5H9J9 407 aa5.74□□□□□ -1.49
USF3-202ENST00000478658 TRPV3Q8NET8 790 aa5.74□□□□□ -1.49
USF3-202ENST00000478658 TSPAN14Q8NG11 270 aa5.74□□□□□ -1.49
USF3-202ENST00000478658 OTUD5Q96G74 571 aa5.74□□□□□ -1.49
USF3-202ENST00000478658 FRMD6Q96NE9 622 aa5.74□□□□□ -1.49
USF3-202ENST00000478658 LBHD1Q9BQE6 289 aaPredicted RBP5.74□□□□□ -1.49
USF3-202ENST00000478658 DTNAQ9Y4J8 743 aa5.74□□□□□ -1.49
USF3-202ENST00000478658 RTN3O95197 1032 aaPredicted RBP5.73□□□□□ -1.49
USF3-202ENST00000478658 EXOSC10Q01780 885 aaKnown RBP5.73□□□□□ -1.49
USF3-202ENST00000478658 CDC73Q6P1J9 531 aa5.73□□□□□ -1.49
USF3-202ENST00000478658 CCDC197Q8NCU1 140 aa5.73□□□□□ -1.49
USF3-202ENST00000478658 CHAC2Q8WUX2 184 aa5.73□□□□□ -1.49
USF3-202ENST00000478658 DEPDC1BQ8WUY9 529 aa5.73□□□□□ -1.49
USF3-202ENST00000478658 RAD54LQ92698 747 aa5.73□□□□□ -1.49
USF3-202ENST00000478658 TXN2Q99757 166 aa5.73□□□□□ -1.49
USF3-202ENST00000478658 PUS7LQ9H0K6 701 aaKnown RBP5.73□□□□□ -1.49
USF3-202ENST00000478658 USE1Q9NZ43 259 aa5.73□□□□□ -1.49
USF3-202ENST00000478658 DDX41Q9UJV9 622 aaKnown RBP5.73□□□□□ -1.49
USF3-202ENST00000478658 KCNH4Q9UQ05 1017 aa5.73□□□□□ -1.49
USF3-202ENST00000478658 MRPL11Q9Y3B7 192 aaKnown RBP5.73□□□□□ -1.49
USF3-202ENST00000478658 MAGED1Q9Y5V3 778 aaPredicted RBP5.73□□□□□ -1.49
USF3-202ENST00000478658 TOM1O60784 492 aa5.73□□□□□ -1.49
USF3-202ENST00000478658 CLTAP09496 248 aa5.73□□□□□ -1.49
USF3-202ENST00000478658 GCFC2P16383 781 aaKnown RBP5.73□□□□□ -1.49
USF3-202ENST00000478658 MORC3Q14149 939 aa5.73□□□□□ -1.49
USF3-202ENST00000478658 ARHGAP17Q68EM7 881 aa5.73□□□□□ -1.49
USF3-202ENST00000478658 ZBED8Q8IZ13 594 aa5.73□□□□□ -1.49
USF3-202ENST00000478658 DNAAF3Q8N9W5 541 aa5.73□□□□□ -1.49
USF3-202ENST00000478658 CCT8L2Q96SF2 557 aa5.73□□□□□ -1.49
USF3-202ENST00000478658 AAASQ9NRG9 546 aa5.73□□□□□ -1.49
USF3-202ENST00000478658 STK39Q9UEW8 545 aa5.73□□□□□ -1.49
USF3-202ENST00000478658 LIMA1Q9UHB6 759 aaKnown RBP5.73□□□□□ -1.49
USF3-202ENST00000478658 V9GY48 417 aaPredicted RBP5.73□□□□□ -1.49
USF3-202ENST00000478658 MAP3K6O95382 1288 aa5.73□□□□□ -1.49
USF3-202ENST00000478658 GJA1P17302 382 aa5.73□□□□□ -1.49
USF3-202ENST00000478658 ITGB6P18564 788 aa5.73□□□□□ -1.49
USF3-202ENST00000478658 HSD17B3P37058 310 aa5.73□□□□□ -1.49
USF3-202ENST00000478658 GMFBP60983 142 aa5.73□□□□□ -1.49
USF3-202ENST00000478658 HDLBPQ00341 1268 aaKnown RBP5.73□□□□□ -1.49
USF3-202ENST00000478658 BDH1Q02338 343 aa5.73□□□□□ -1.49
USF3-202ENST00000478658 PTK2Q05397 1052 aa5.73□□□□□ -1.49
USF3-202ENST00000478658 CYB5D1Q6P9G0 228 aa5.73□□□□□ -1.49
USF3-202ENST00000478658 LMBR1LQ6UX01 489 aa5.73□□□□□ -1.49
USF3-202ENST00000478658 SETD3Q86TU7 594 aaPredicted RBP5.73□□□□□ -1.49
USF3-202ENST00000478658 NT5C1AQ9BXI3 368 aa5.73□□□□□ -1.49
USF3-202ENST00000478658 MTMR12Q9C0I1 747 aa5.73□□□□□ -1.49
USF3-202ENST00000478658 STK32BQ9NY57 414 aa5.73□□□□□ -1.49
USF3-202ENST00000478658 ZNF112Q9UJU3 913 aa5.73□□□□□ -1.49
USF3-202ENST00000478658 LSM7Q9UK45 103 aaKnown RBP5.73□□□□□ -1.49
USF3-202ENST00000478658 SYNJ2O15056 1496 aa5.73□□□□□ -1.49
USF3-202ENST00000478658 KANSL1LA0AUZ9 987 aa5.73□□□□□ -1.49
USF3-202ENST00000478658 LAD1O00515 517 aa5.73□□□□□ -1.49
USF3-202ENST00000478658 PLCG1P19174 1290 aa5.73□□□□□ -1.49
USF3-202ENST00000478658 ECHS1P30084 290 aa5.73□□□□□ -1.49
USF3-202ENST00000478658 PRKAR2BP31323 418 aa5.73□□□□□ -1.49
USF3-202ENST00000478658 PMS1P54277 932 aaKnown RBP5.73□□□□□ -1.49
USF3-202ENST00000478658 NFYCQ13952 458 aa5.73□□□□□ -1.49
USF3-202ENST00000478658 FAM189A2Q15884 450 aa5.73□□□□□ -1.49
USF3-202ENST00000478658 SARM1Q6SZW1 724 aa5.73□□□□□ -1.49
USF3-202ENST00000478658 KCNS3Q9BQ31 491 aa5.73□□□□□ -1.49
USF3-202ENST00000478658 CHCHD6Q9BRQ6 235 aa5.73□□□□□ -1.49
USF3-202ENST00000478658 AP3M1Q9Y2T2 418 aa5.73□□□□□ -1.49
USF3-202ENST00000478658 SYNGAP1Q96PV0 1343 aa5.73□□□□□ -1.49
USF3-202ENST00000478658 A0A0J9YVX5 310 aa5.73□□□□□ -1.49
USF3-202ENST00000478658 MYO1CO00159 1063 aa5.73□□□□□ -1.49
USF3-202ENST00000478658 ALBP02768 609 aa5.73□□□□□ -1.49
USF3-202ENST00000478658 HPGDP15428 266 aa5.73□□□□□ -1.49
USF3-202ENST00000478658 GAP43P17677 238 aa5.73□□□□□ -1.49
USF3-202ENST00000478658 SCP2P22307 547 aa5.73□□□□□ -1.49
USF3-202ENST00000478658 HOXC12P31275 282 aa5.73□□□□□ -1.49
USF3-202ENST00000478658 GUCY2FP51841 1108 aa5.73□□□□□ -1.49
USF3-202ENST00000478658 VSNL1P62760 191 aa5.73□□□□□ -1.49
USF3-202ENST00000478658 MRPS25P82663 173 aaKnown RBP5.73□□□□□ -1.49
USF3-202ENST00000478658 KCNB1Q14721 858 aa5.73□□□□□ -1.49
USF3-202ENST00000478658 PLCL1Q15111 1095 aa5.73□□□□□ -1.49
USF3-202ENST00000478658 NIM1KQ8IY84 436 aa5.73□□□□□ -1.49
USF3-202ENST00000478658 STKLD1Q8NE28 680 aa5.73□□□□□ -1.49
USF3-202ENST00000478658 ZSWIM5Q9P217 1185 aa5.73□□□□□ -1.49
USF3-202ENST00000478658 VPS51Q9UID3 782 aa5.73□□□□□ -1.49
USF3-202ENST00000478658 ZNF148Q9UQR1 794 aa5.73□□□□□ -1.49
USF3-202ENST00000478658 PRLRP16471 622 aa5.73□□□□□ -1.49
USF3-202ENST00000478658 RALGDSQ12967 914 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms