RNA–Protein interactions for RNA: ENST00000477561.5

HDAC6-221, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-221ENST00000477561 OFD1O75665 1012 aa9.16□□□□□ -0.94
HDAC6-221ENST00000477561 BRD1O95696 1058 aa9.16□□□□□ -0.94
HDAC6-221ENST00000477561 SSBP05455 408 aaKnown RBP eCLIP9.16□□□□□ -0.94
HDAC6-221ENST00000477561 SKIP12755 728 aa9.16□□□□□ -0.94
HDAC6-221ENST00000477561 BMP1P13497 986 aa9.16□□□□□ -0.94
HDAC6-221ENST00000477561 ARF4P18085 180 aaPredicted RBP9.16□□□□□ -0.94
HDAC6-221ENST00000477561 LAG3P18627 525 aa9.16□□□□□ -0.94
HDAC6-221ENST00000477561 SYT1P21579 422 aa9.16□□□□□ -0.94
HDAC6-221ENST00000477561 MUTP22033 750 aa9.16□□□□□ -0.94
HDAC6-221ENST00000477561 RAB27AP51159 221 aa9.16□□□□□ -0.94
HDAC6-221ENST00000477561 AFF1P51825 1210 aaKnown RBP9.16□□□□□ -0.94
HDAC6-221ENST00000477561 ERVFC1P60507 584 aa9.16□□□□□ -0.94
HDAC6-221ENST00000477561 POU5F1BQ06416 359 aa9.16□□□□□ -0.94
HDAC6-221ENST00000477561 NCBP1Q09161 790 aaKnown RBP9.16□□□□□ -0.94
HDAC6-221ENST00000477561 HYAL1Q12794 435 aa9.16□□□□□ -0.94
HDAC6-221ENST00000477561 AMHR2Q16671 573 aa9.16□□□□□ -0.94
HDAC6-221ENST00000477561 AAK1Q2M2I8 961 aa9.16□□□□□ -0.94
HDAC6-221ENST00000477561 FAM173BQ6P4H8 233 aa9.16□□□□□ -0.94
HDAC6-221ENST00000477561 GLB1LQ6UWU2 654 aa9.16□□□□□ -0.94
HDAC6-221ENST00000477561 AGMOQ6ZNB7 445 aa9.16□□□□□ -0.94
HDAC6-221ENST00000477561 KCNK18Q7Z418 384 aa9.16□□□□□ -0.94
HDAC6-221ENST00000477561 BRAPQ7Z569 592 aa9.16□□□□□ -0.94
HDAC6-221ENST00000477561 ADGRD2Q7Z7M1 963 aa9.16□□□□□ -0.94
HDAC6-221ENST00000477561 RBM23Q86U06 439 aaKnown RBP9.16□□□□□ -0.94
HDAC6-221ENST00000477561 SMG8Q8ND04 991 aaKnown RBP9.16□□□□□ -0.94
HDAC6-221ENST00000477561 ADAMTS19Q8TE59 1207 aa9.16□□□□□ -0.94
HDAC6-221ENST00000477561 SYMPKQ92797 1274 aaKnown RBP9.16□□□□□ -0.94
HDAC6-221ENST00000477561 PGBD4Q96DM1 585 aa9.16□□□□□ -0.94
HDAC6-221ENST00000477561 ZNF558Q96NG5 402 aa9.16□□□□□ -0.94
HDAC6-221ENST00000477561 PNMA5Q96PV4 448 aa9.16□□□□□ -0.94
HDAC6-221ENST00000477561 KIFC3Q9BVG8 833 aa9.16□□□□□ -0.94
HDAC6-221ENST00000477561 TRAIPQ9BWF2 469 aa9.16□□□□□ -0.94
HDAC6-221ENST00000477561 APOL6Q9BWW8 343 aa9.16□□□□□ -0.94
HDAC6-221ENST00000477561 CLDND1Q9NY35 253 aa9.16□□□□□ -0.94
HDAC6-221ENST00000477561 DNM3Q9UQ16 869 aa9.16□□□□□ -0.94
HDAC6-221ENST00000477561 HES2Q9Y543 173 aa9.16□□□□□ -0.94
HDAC6-221ENST00000477561 STK24Q9Y6E0 443 aa9.16□□□□□ -0.94
HDAC6-221ENST00000477561 TTLL13PA6NNM8 815 aa9.15□□□□□ -0.94
HDAC6-221ENST00000477561 GOLGA6L22H0YM25 854 aa9.15□□□□□ -0.94
HDAC6-221ENST00000477561 PER2O15055 1255 aa9.15□□□□□ -0.94
HDAC6-221ENST00000477561 ZC3H11AO75152 810 aaKnown RBP eCLIP9.15□□□□□ -0.94
HDAC6-221ENST00000477561 NPTXRO95502 500 aa9.15□□□□□ -0.94
HDAC6-221ENST00000477561 EYA4O95677 639 aa9.15□□□□□ -0.94
HDAC6-221ENST00000477561 POMCP01189 267 aa9.15□□□□□ -0.94
HDAC6-221ENST00000477561 ITGA4P13612 1032 aa9.15□□□□□ -0.94
HDAC6-221ENST00000477561 PTMSP20962 102 aa9.15□□□□□ -0.94
HDAC6-221ENST00000477561 BCAR1P56945 870 aa9.15□□□□□ -0.94
HDAC6-221ENST00000477561 CEBPZQ03701 1054 aaKnown RBP9.15□□□□□ -0.94
HDAC6-221ENST00000477561 GRIN1Q05586 938 aa9.15□□□□□ -0.94
HDAC6-221ENST00000477561 RNASELQ05823 741 aaKnown RBP9.15□□□□□ -0.94
HDAC6-221ENST00000477561 DLX2Q07687 328 aaPredicted RBP9.15□□□□□ -0.94
HDAC6-221ENST00000477561 RAD51AP2Q09MP3 1159 aa9.15□□□□□ -0.94
HDAC6-221ENST00000477561 RESTQ13127 1097 aa9.15□□□□□ -0.94
HDAC6-221ENST00000477561 SF3A1Q15459 793 aaKnown RBP9.15□□□□□ -0.94
HDAC6-221ENST00000477561 CLUL1Q15846 466 aa9.15□□□□□ -0.94
HDAC6-221ENST00000477561 TMEM132AQ24JP5 1023 aa9.15□□□□□ -0.94
HDAC6-221ENST00000477561 NOMO2Q5JPE7 1267 aa9.15□□□□□ -0.94
HDAC6-221ENST00000477561 NOTUMQ6P988 496 aa9.15□□□□□ -0.94
HDAC6-221ENST00000477561 MRPL10Q7Z7H8 261 aaKnown RBP9.15□□□□□ -0.94
HDAC6-221ENST00000477561 CABP7Q86V35 215 aa9.15□□□□□ -0.94
HDAC6-221ENST00000477561 ZNF280BQ86YH2 543 aa9.15□□□□□ -0.94
HDAC6-221ENST00000477561 IFNLR1Q8IU57 520 aaPredicted RBP9.15□□□□□ -0.94
HDAC6-221ENST00000477561 ZBTB8OSQ8IWT0 167 aa9.15□□□□□ -0.94
HDAC6-221ENST00000477561 PABPC5Q96DU9 382 aaKnown RBP9.15□□□□□ -0.94
HDAC6-221ENST00000477561 CDK5RAP3Q96JB5 506 aa9.15□□□□□ -0.94
HDAC6-221ENST00000477561 RUSC1Q9BVN2 902 aa9.15□□□□□ -0.94
HDAC6-221ENST00000477561 MRPL9Q9BYD2 267 aaKnown RBP9.15□□□□□ -0.94
HDAC6-221ENST00000477561 NFKBIZQ9BYH8 718 aa9.15□□□□□ -0.94
HDAC6-221ENST00000477561 CSRNP2Q9H175 543 aa9.15□□□□□ -0.94
HDAC6-221ENST00000477561 NRDE2Q9H7Z3 1164 aa9.15□□□□□ -0.94
HDAC6-221ENST00000477561 RSAD1Q9HA92 442 aa9.15□□□□□ -0.94
HDAC6-221ENST00000477561 TLR9Q9NR96 1032 aa9.15□□□□□ -0.94
HDAC6-221ENST00000477561 TBC1D13Q9NVG8 400 aa9.15□□□□□ -0.94
HDAC6-221ENST00000477561 SPG21Q9NZD8 308 aa9.15□□□□□ -0.94
HDAC6-221ENST00000477561 DNAJB4Q9UDY4 337 aa9.15□□□□□ -0.94
HDAC6-221ENST00000477561 IPPQ9Y573 584 aa9.15□□□□□ -0.94
HDAC6-221ENST00000477561 ATP6V1DQ9Y5K8 247 aa9.15□□□□□ -0.94
HDAC6-221ENST00000477561 CLIC4Q9Y696 253 aa9.15□□□□□ -0.94
HDAC6-221ENST00000477561 SFI1A8K8P3 1242 aa9.14□□□□□ -0.95
HDAC6-221ENST00000477561 B4GALT3O60512 393 aa9.14□□□□□ -0.95
HDAC6-221ENST00000477561 HIP1RO75146 1068 aa9.14□□□□□ -0.95
HDAC6-221ENST00000477561 DDHD2O94830 711 aa9.14□□□□□ -0.95
HDAC6-221ENST00000477561 EDN1P05305 212 aa9.14□□□□□ -0.95
HDAC6-221ENST00000477561 ZSCAN22P10073 491 aaPredicted RBP9.14□□□□□ -0.95
HDAC6-221ENST00000477561 NCLP19338 710 aaKnown RBP9.14□□□□□ -0.95
HDAC6-221ENST00000477561 AKAP5P24588 427 aa9.14□□□□□ -0.95
HDAC6-221ENST00000477561 AXLP30530 894 aa9.14□□□□□ -0.95
HDAC6-221ENST00000477561 CA8P35219 290 aa9.14□□□□□ -0.95
HDAC6-221ENST00000477561 LTBRP36941 435 aa9.14□□□□□ -0.95
HDAC6-221ENST00000477561 NAMPTP43490 491 aa9.14□□□□□ -0.95
HDAC6-221ENST00000477561 NRIP1P48552 1158 aa9.14□□□□□ -0.95
HDAC6-221ENST00000477561 ALDH7A1P49419 539 aaKnown RBP9.14□□□□□ -0.95
HDAC6-221ENST00000477561 PEX3P56589 373 aa9.14□□□□□ -0.95
HDAC6-221ENST00000477561 PLCB3Q01970 1234 aa9.14□□□□□ -0.95
HDAC6-221ENST00000477561 KRT17Q04695 432 aa9.14□□□□□ -0.95
HDAC6-221ENST00000477561 UBE3AQ05086 875 aa9.14□□□□□ -0.95
HDAC6-221ENST00000477561 DHX8Q14562 1220 aaKnown RBP9.14□□□□□ -0.95
HDAC6-221ENST00000477561 PCBP1Q15365 356 aaKnown RBP eCLIP9.14□□□□□ -0.95
HDAC6-221ENST00000477561 CSPP1Q1MSJ5 1256 aa9.14□□□□□ -0.95
HDAC6-221ENST00000477561 FOXD4L5Q5VV16 416 aaPredicted RBP9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms