RNA–Protein interactions for RNA: ENST00000475146.1

CPNE1-223, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 627 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-223ENST00000475146 NOMO2Q5JPE7 1267 aa26.56■■□□□ 1.84
CPNE1-223ENST00000475146 KCNT2Q6UVM3 1135 aa26.56■■□□□ 1.84
CPNE1-223ENST00000475146 RUSC1Q9BVN2 902 aa26.56■■□□□ 1.84
CPNE1-223ENST00000475146 TRIM6Q9C030 488 aaPredicted RBP26.56■■□□□ 1.84
CPNE1-223ENST00000475146 RSAD1Q9HA92 442 aa26.56■■□□□ 1.84
CPNE1-223ENST00000475146 CLIC4Q9Y696 253 aa26.56■■□□□ 1.84
CPNE1-223ENST00000475146 DLL1O00548 723 aa26.55■■□□□ 1.84
CPNE1-223ENST00000475146 OFD1O75665 1012 aa26.55■■□□□ 1.84
CPNE1-223ENST00000475146 NCLP19338 710 aaKnown RBP26.55■■□□□ 1.84
CPNE1-223ENST00000475146 UBA7P41226 1012 aa26.55■■□□□ 1.84
CPNE1-223ENST00000475146 RNASELQ05823 741 aaKnown RBP26.55■■□□□ 1.84
CPNE1-223ENST00000475146 CAMK1Q14012 370 aa26.55■■□□□ 1.84
CPNE1-223ENST00000475146 PPP4R3CPQ6ZMV5 832 aa26.55■■□□□ 1.84
CPNE1-223ENST00000475146 AGMOQ6ZNB7 445 aa26.55■■□□□ 1.84
CPNE1-223ENST00000475146 MRPL10Q7Z7H8 261 aaKnown RBP26.55■■□□□ 1.84
CPNE1-223ENST00000475146 CNNM3Q8NE01 707 aa26.55■■□□□ 1.84
CPNE1-223ENST00000475146 RASSF8Q8NHQ8 419 aa26.55■■□□□ 1.84
CPNE1-223ENST00000475146 URGCPQ8TCY9 931 aa26.55■■□□□ 1.84
CPNE1-223ENST00000475146 KIFC3Q9BVG8 833 aa26.55■■□□□ 1.84
CPNE1-223ENST00000475146 IPPQ9Y573 584 aa26.55■■□□□ 1.84
CPNE1-223ENST00000475146 CNTNAP2Q9UHC6 1331 aa26.55■■□□□ 1.84
CPNE1-223ENST00000475146 PLXNA4Q9HCM2 1894 aa26.54■■□□□ 1.84
CPNE1-223ENST00000475146 HIP1RO75146 1068 aa26.54■■□□□ 1.84
CPNE1-223ENST00000475146 ITGA4P13612 1032 aa26.54■■□□□ 1.84
CPNE1-223ENST00000475146 PPM1AP35813 382 aa26.54■■□□□ 1.84
CPNE1-223ENST00000475146 LONP1P36776 959 aaKnown RBP26.54■■□□□ 1.84
CPNE1-223ENST00000475146 CEBPZQ03701 1054 aaKnown RBP26.54■■□□□ 1.84
CPNE1-223ENST00000475146 UBE3AQ05086 875 aa26.54■■□□□ 1.84
CPNE1-223ENST00000475146 GRIN1Q05586 938 aa26.54■■□□□ 1.84
CPNE1-223ENST00000475146 MAPK6Q16659 721 aa26.54■■□□□ 1.84
CPNE1-223ENST00000475146 TMEM119Q4V9L6 283 aa26.54■■□□□ 1.84
CPNE1-223ENST00000475146 RINT1Q6NUQ1 792 aa26.54■■□□□ 1.84
CPNE1-223ENST00000475146 EP400NLQ6ZTU2 488 aa26.54■■□□□ 1.84
CPNE1-223ENST00000475146 CDR2LQ86X02 465 aaPredicted RBP26.54■■□□□ 1.84
CPNE1-223ENST00000475146 KCTD17Q8N5Z5 321 aa26.54■■□□□ 1.84
CPNE1-223ENST00000475146 SMG8Q8ND04 991 aaKnown RBP26.54■■□□□ 1.84
CPNE1-223ENST00000475146 CALML4Q96GE6 196 aa26.54■■□□□ 1.84
CPNE1-223ENST00000475146 PRIMPOLQ96LW4 560 aa26.54■■□□□ 1.84
CPNE1-223ENST00000475146 APOL6Q9BWW8 343 aa26.54■■□□□ 1.84
CPNE1-223ENST00000475146 COL25A1Q9BXS0 654 aaPredicted RBP26.54■■□□□ 1.84
CPNE1-223ENST00000475146 UBE2ZQ9H832 354 aaPredicted RBP26.54■■□□□ 1.84
CPNE1-223ENST00000475146 TBC1D13Q9NVG8 400 aa26.54■■□□□ 1.84
CPNE1-223ENST00000475146 ATG2AQ2TAZ0 1938 aa26.54■■□□□ 1.84
CPNE1-223ENST00000475146 MYO7AQ13402 2215 aa26.54■■□□□ 1.84
CPNE1-223ENST00000475146 ZC3H11AO75152 810 aaKnown RBP eCLIP26.53■■□□□ 1.84
CPNE1-223ENST00000475146 NPTXRO95502 500 aa26.53■■□□□ 1.84
CPNE1-223ENST00000475146 PRKCBP05771 671 aa26.53■■□□□ 1.84
CPNE1-223ENST00000475146 IRS1P35568 1242 aa26.53■■□□□ 1.84
CPNE1-223ENST00000475146 HACE1Q8IYU2 909 aa26.53■■□□□ 1.84
CPNE1-223ENST00000475146 MICAL1Q8TDZ2 1067 aa26.53■■□□□ 1.84
CPNE1-223ENST00000475146 SYMPKQ92797 1274 aaKnown RBP26.53■■□□□ 1.84
CPNE1-223ENST00000475146 PPP2R3CQ969Q6 453 aa26.53■■□□□ 1.84
CPNE1-223ENST00000475146 DRC1Q96MC2 740 aa26.53■■□□□ 1.84
CPNE1-223ENST00000475146 GBP3Q9H0R5 595 aa26.53■■□□□ 1.84
CPNE1-223ENST00000475146 FZD8Q9H461 694 aa26.53■■□□□ 1.84
CPNE1-223ENST00000475146 ZSCAN16Q9H4T2 348 aaPredicted RBP26.53■■□□□ 1.84
CPNE1-223ENST00000475146 TLR9Q9NR96 1032 aa26.53■■□□□ 1.84
CPNE1-223ENST00000475146 SPG21Q9NZD8 308 aa26.53■■□□□ 1.84
CPNE1-223ENST00000475146 HES2Q9Y543 173 aa26.53■■□□□ 1.84
CPNE1-223ENST00000475146 SLC26A4O43511 780 aa26.52■■□□□ 1.84
CPNE1-223ENST00000475146 MARCKSP29966 332 aaPredicted RBP26.52■■□□□ 1.84
CPNE1-223ENST00000475146 ALDH7A1P49419 539 aaKnown RBP26.52■■□□□ 1.84
CPNE1-223ENST00000475146 KCNQ1P51787 676 aa26.52■■□□□ 1.84
CPNE1-223ENST00000475146 PEX3P56589 373 aa26.52■■□□□ 1.84
CPNE1-223ENST00000475146 BCAR1P56945 870 aa26.52■■□□□ 1.84
CPNE1-223ENST00000475146 PRPF4BQ13523 1007 aaKnown RBP26.52■■□□□ 1.84
CPNE1-223ENST00000475146 PTPAQ15257 358 aa26.52■■□□□ 1.84
CPNE1-223ENST00000475146 FAM187BQ17R55 369 aa26.52■■□□□ 1.84
CPNE1-223ENST00000475146 SLC27A1Q6PCB7 646 aa26.52■■□□□ 1.84
CPNE1-223ENST00000475146 C1orf186Q6ZWK4 172 aa26.52■■□□□ 1.84
CPNE1-223ENST00000475146 PUF60Q9UHX1 559 aaKnown RBP26.52■■□□□ 1.84
CPNE1-223ENST00000475146 A0A1B0GUA9 196 aa26.51■■□□□ 1.83
CPNE1-223ENST00000475146 CCDC169A6NNP5 214 aa26.51■■□□□ 1.83
CPNE1-223ENST00000475146 PLA2G4BP0C869 781 aa26.51■■□□□ 1.83
CPNE1-223ENST00000475146 KCNA5P22460 613 aa26.51■■□□□ 1.83
CPNE1-223ENST00000475146 EFNA5P52803 228 aa26.51■■□□□ 1.83
CPNE1-223ENST00000475146 PLCB3Q01970 1234 aa26.51■■□□□ 1.83
CPNE1-223ENST00000475146 KRT17Q04695 432 aa26.51■■□□□ 1.83
CPNE1-223ENST00000475146 RAD51AP2Q09MP3 1159 aa26.51■■□□□ 1.83
CPNE1-223ENST00000475146 DMP1Q13316 513 aaPredicted RBP26.51■■□□□ 1.83
CPNE1-223ENST00000475146 SLC39A11Q8N1S5 342 aa26.51■■□□□ 1.83
CPNE1-223ENST00000475146 SYT2Q8N9I0 419 aaPredicted RBP26.51■■□□□ 1.83
CPNE1-223ENST00000475146 MRPS27Q92552 414 aaKnown RBP26.51■■□□□ 1.83
CPNE1-223ENST00000475146 CCDC113Q9H0I3 377 aa26.51■■□□□ 1.83
CPNE1-223ENST00000475146 NXF3Q9H4D5 531 aaKnown RBP26.51■■□□□ 1.83
CPNE1-223ENST00000475146 NRDE2Q9H7Z3 1164 aa26.51■■□□□ 1.83
CPNE1-223ENST00000475146 UBN1Q9NPG3 1134 aa26.51■■□□□ 1.83
CPNE1-223ENST00000475146 PCDHGC5Q9Y5F6 944 aa26.51■■□□□ 1.83
CPNE1-223ENST00000475146 NT5C1B-RDH14C9J2C7 533 aa26.5■■□□□ 1.83
CPNE1-223ENST00000475146 HYAL1Q12794 435 aa26.5■■□□□ 1.83
CPNE1-223ENST00000475146 DAW1Q8N136 415 aa26.5■■□□□ 1.83
CPNE1-223ENST00000475146 PABPC5Q96DU9 382 aaKnown RBP26.5■■□□□ 1.83
CPNE1-223ENST00000475146 USP28Q96RU2 1077 aa26.5■■□□□ 1.83
CPNE1-223ENST00000475146 TIPINQ9BVW5 301 aa26.5■■□□□ 1.83
CPNE1-223ENST00000475146 RNF39Q9H2S5 420 aa26.5■■□□□ 1.83
CPNE1-223ENST00000475146 IGFLR1Q9H665 355 aa26.5■■□□□ 1.83
CPNE1-223ENST00000475146 CLDND1Q9NY35 253 aa26.5■■□□□ 1.83
CPNE1-223ENST00000475146 KANSL3Q9P2N6 904 aa26.5■■□□□ 1.83
CPNE1-223ENST00000475146 LZTS1Q9Y250 596 aa26.5■■□□□ 1.83
CPNE1-223ENST00000475146 UNC80Q8N2C7 3258 aa26.49■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms