RNA–Protein interactions for RNA: ENST00000470006.1

NCKIPSD-209, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 2

Gene NCKIPSD, Length 814 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-209ENST00000470006 TCEANC2Q96MN5 208 aa21.32■■□□□ 1
NCKIPSD-209ENST00000470006 RPS6KC1Q96S38 1066 aa21.32■■□□□ 1
NCKIPSD-209ENST00000470006 TMEM175Q9BSA9 504 aa21.32■■□□□ 1
NCKIPSD-209ENST00000470006 FOXQ1Q9C009 403 aa21.32■■□□□ 1
NCKIPSD-209ENST00000470006 LSG1Q9H089 658 aaKnown RBP21.32■■□□□ 1
NCKIPSD-209ENST00000470006 KANSL3Q9P2N6 904 aa21.32■■□□□ 1
NCKIPSD-209ENST00000470006 BRPF3Q9ULD4 1205 aa21.32■■□□□ 1
NCKIPSD-209ENST00000470006 PRG3Q9Y2Y8 225 aaPredicted RBP21.32■■□□□ 1
NCKIPSD-209ENST00000470006 FANCMQ8IYD8 2048 aa21.31■■□□□ 1
NCKIPSD-209ENST00000470006 NRP1O14786 923 aa21.31■■□□□ 1
NCKIPSD-209ENST00000470006 TEX28O15482 410 aa21.31■■□□□ 1
NCKIPSD-209ENST00000470006 SOD2P04179 222 aa21.31■■□□□ 1
NCKIPSD-209ENST00000470006 SFNP31947 248 aa21.31■■□□□ 1
NCKIPSD-209ENST00000470006 JAK3P52333 1124 aa21.31■■□□□ 1
NCKIPSD-209ENST00000470006 ZNF410Q86VK4 478 aa21.31■■□□□ 1
NCKIPSD-209ENST00000470006 CCDC12Q8WUD4 166 aaPredicted RBP21.31■■□□□ 1
NCKIPSD-209ENST00000470006 PHKBQ93100 1093 aa21.31■■□□□ 1
NCKIPSD-209ENST00000470006 TEKT3Q9BXF9 490 aa21.31■■□□□ 1
NCKIPSD-209ENST00000470006 RSAD1Q9HA92 442 aa21.31■■□□□ 1
NCKIPSD-209ENST00000470006 TMEM150BA6NC51 233 aa21.3■■□□□ 1
NCKIPSD-209ENST00000470006 ADAMTS3O15072 1205 aa21.3■■□□□ 1
NCKIPSD-209ENST00000470006 OR1G1P47890 313 aa21.3■■□□□ 1
NCKIPSD-209ENST00000470006 TARBP2Q15633 366 aaKnown RBP21.3■■□□□ 1
NCKIPSD-209ENST00000470006 PFKFB3Q16875 520 aaPredicted RBP21.3■■□□□ 1
NCKIPSD-209ENST00000470006 LRCH2Q5VUJ6 765 aa21.3■■□□□ 1
NCKIPSD-209ENST00000470006 AGMOQ6ZNB7 445 aa21.3■■□□□ 1
NCKIPSD-209ENST00000470006 TAS1R1Q7RTX1 841 aa21.3■■□□□ 1
NCKIPSD-209ENST00000470006 PALB2Q86YC2 1186 aa21.3■■□□□ 1
NCKIPSD-209ENST00000470006 KSR1Q8IVT5 923 aa21.3■■□□□ 1
NCKIPSD-209ENST00000470006 SHDQ96IW2 340 aa21.3■■□□□ 1
NCKIPSD-209ENST00000470006 UNC45AQ9H3U1 944 aa21.3■■□□□ 1
NCKIPSD-209ENST00000470006 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP21.3■■□□□ 12e-6■■□□□ 12.6
NCKIPSD-209ENST00000470006 DLGAP2Q9P1A6 1054 aa21.3■■□□□ 1
NCKIPSD-209ENST00000470006 DOCK8Q8NF50 2099 aa21.3■■□□□ 1
NCKIPSD-209ENST00000470006 SPTBN2O15020 2390 aa21.3■■□□□ 1
NCKIPSD-209ENST00000470006 KLF18A0A0U1RQI7 1052 aa21.29■■□□□ 1
NCKIPSD-209ENST00000470006 DDX11L8A8MPP1 907 aa21.29■■□□□ 1
NCKIPSD-209ENST00000470006 MSH4O15457 936 aa21.29■■□□□ 1
NCKIPSD-209ENST00000470006 LAMP2P13473 410 aa21.29■■□□□ 1
NCKIPSD-209ENST00000470006 GNA11P29992 359 aa21.29■■□□□ 1
NCKIPSD-209ENST00000470006 GLUD2P49448 558 aa21.29■■□□□ 1
NCKIPSD-209ENST00000470006 AFF1P51825 1210 aaKnown RBP21.29■■□□□ 1
NCKIPSD-209ENST00000470006 XKR3Q5GH77 459 aa21.29■■□□□ 1
NCKIPSD-209ENST00000470006 MIER3Q7Z3K6 550 aa21.29■■□□□ 1
NCKIPSD-209ENST00000470006 PJA1Q8NG27 643 aa21.29■■□□□ 1
NCKIPSD-209ENST00000470006 CCDC136Q96JN2 1154 aa21.29■■□□□ 1
NCKIPSD-209ENST00000470006 HERC2P3Q9BVR0 1158 aa21.29■■□□□ 1
NCKIPSD-209ENST00000470006 NIFKQ9BYG3 293 aaKnown RBP21.29■■□□□ 1
NCKIPSD-209ENST00000470006 ZMYND12Q9H0C1 365 aa21.29■■□□□ 1
NCKIPSD-209ENST00000470006 ANO2Q9NQ90 1003 aa21.29■■□□□ 1
NCKIPSD-209ENST00000470006 SPATA6Q9NWH7 488 aaPredicted RBP21.29■■□□□ 1
NCKIPSD-209ENST00000470006 MIA3Q5JRA6 1907 aa21.28■■□□□ 1
NCKIPSD-209ENST00000470006 POTEMA6NI47 508 aa21.28■■□□□ 1
NCKIPSD-209ENST00000470006 GAS2O43903 313 aaKnown RBP21.28■■□□□ 1
NCKIPSD-209ENST00000470006 LRRN2O75325 713 aa21.28■■□□□ 1
NCKIPSD-209ENST00000470006 SDHBP21912 280 aa21.28■■□□□ 1
NCKIPSD-209ENST00000470006 CDC27P30260 824 aa21.28■■□□□ 1
NCKIPSD-209ENST00000470006 CIITAP33076 1130 aa21.28■■□□□ 1
NCKIPSD-209ENST00000470006 NECTIN1Q15223 517 aa21.28■■□□□ 1
NCKIPSD-209ENST00000470006 VARS2Q5ST30 1063 aaKnown RBP21.28■■□□□ 1
NCKIPSD-209ENST00000470006 POTEGQ6S5H5 508 aa21.28■■□□□ 1
NCKIPSD-209ENST00000470006 GLYCTKQ8IVS8 523 aa21.28■■□□□ 1
NCKIPSD-209ENST00000470006 SUMF1Q8NBK3 374 aa21.28■■□□□ 1
NCKIPSD-209ENST00000470006 GJA10Q969M2 543 aa21.28■■□□□ 1
NCKIPSD-209ENST00000470006 LENG9Q96B70 501 aa21.28■■□□□ 1
NCKIPSD-209ENST00000470006 RIT2Q99578 217 aa21.28■■□□□ 1
NCKIPSD-209ENST00000470006 NUMBLQ9Y6R0 609 aa21.28■■□□□ 1
NCKIPSD-209ENST00000470006 CNTNAP2Q9UHC6 1331 aa21.28■■□□□ 1
NCKIPSD-209ENST00000470006 ESYT2A0FGR8 921 aa21.27■■□□□ 1
NCKIPSD-209ENST00000470006 LAMTOR5O43504 91 aa21.27■■□□□ 1
NCKIPSD-209ENST00000470006 GLULP15104 373 aa21.27■■□□□ 1
NCKIPSD-209ENST00000470006 FGD1P98174 961 aa21.27■■□□□ 1
NCKIPSD-209ENST00000470006 RNF20Q5VTR2 975 aa21.27■■□□□ 1
NCKIPSD-209ENST00000470006 BICD2Q8TD16 824 aa21.27■■□□□ 1
NCKIPSD-209ENST00000470006 ATRIPQ8WXE1 791 aa21.27■■□□□ 1
NCKIPSD-209ENST00000470006 SECISBP2LQ93073 1101 aaKnown RBP21.27■■□□□ 1
NCKIPSD-209ENST00000470006 BCO2Q9BYV7 579 aa21.27■■□□□ 1
NCKIPSD-209ENST00000470006 RHOBTB2Q9BYZ6 727 aa21.27■■□□□ 1
NCKIPSD-209ENST00000470006 AGPAT5Q9NUQ2 364 aa21.27■■□□□ 1
NCKIPSD-209ENST00000470006 ACACBO00763 2458 aa21.27■□□□□ 0.99
NCKIPSD-209ENST00000470006 MTCL1Q9Y4B5 1905 aaKnown RBP21.26■□□□□ 0.99
NCKIPSD-209ENST00000470006 NR1I2O75469 434 aa21.26■□□□□ 0.99
NCKIPSD-209ENST00000470006 ADD1P35611 737 aaKnown RBP21.26■□□□□ 0.99
NCKIPSD-209ENST00000470006 HTR4Q13639 388 aa21.26■□□□□ 0.99
NCKIPSD-209ENST00000470006 ZNF707Q96C28 371 aaPredicted RBP21.26■□□□□ 0.99
NCKIPSD-209ENST00000470006 JPH2Q9BR39 696 aaPredicted RBP21.26■□□□□ 0.99
NCKIPSD-209ENST00000470006 NT5C3AQ9H0P0 336 aa21.26■□□□□ 0.99
NCKIPSD-209ENST00000470006 PLEKHA4Q9H4M7 779 aa21.26■□□□□ 0.99
NCKIPSD-209ENST00000470006 SLC2A4RGQ9NR83 387 aa21.26■□□□□ 0.99
NCKIPSD-209ENST00000470006 FAM217BQ9NTX9 383 aaPredicted RBP21.26■□□□□ 0.99
NCKIPSD-209ENST00000470006 MARCH5Q9NX47 278 aa21.26■□□□□ 0.99
NCKIPSD-209ENST00000470006 IGKV6-21A0A0C4DH24 114 aa21.25■□□□□ 0.99
NCKIPSD-209ENST00000470006 MAFO75444 373 aaPredicted RBP21.25■□□□□ 0.99
NCKIPSD-209ENST00000470006 SRGAP2CP0DJJ0 459 aa21.25■□□□□ 0.99
NCKIPSD-209ENST00000470006 ITGA4P13612 1032 aa21.25■□□□□ 0.99
NCKIPSD-209ENST00000470006 AKAP17AQ02040 695 aaKnown RBP21.25■□□□□ 0.99
NCKIPSD-209ENST00000470006 CSTF1Q05048 431 aaKnown RBP21.25■□□□□ 0.99
NCKIPSD-209ENST00000470006 SNW1Q13573 536 aaKnown RBP21.25■□□□□ 0.99
NCKIPSD-209ENST00000470006 UBXN2BQ14CS0 331 aa21.25■□□□□ 0.99
NCKIPSD-209ENST00000470006 KIAA0319Q5VV43 1072 aa21.25■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 91.6 ms