RNA–Protein interactions for RNA: ENST00000462723.1

RPA3-205, Transcript of replication protein A3, humanhuman

TSL 2

Gene RPA3, Length 989 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3-205ENST00000462723 NCKAP1LP55160 1127 aa8.99□□□□□ -0.97
RPA3-205ENST00000462723 SOX10P56693 466 aa8.99□□□□□ -0.97
RPA3-205ENST00000462723 MAP2K1Q02750 393 aaPredicted RBP8.99□□□□□ -0.97
RPA3-205ENST00000462723 KRT31Q15323 416 aa8.99□□□□□ -0.97
RPA3-205ENST00000462723 ZC2HC1CQ53FD0 456 aaPredicted RBP8.99□□□□□ -0.97
RPA3-205ENST00000462723 IER5Q5VY09 327 aa8.99□□□□□ -0.97
RPA3-205ENST00000462723 LRRC55Q6ZSA7 311 aa8.99□□□□□ -0.97
RPA3-205ENST00000462723 CREBRFQ8IUR6 639 aa8.99□□□□□ -0.97
RPA3-205ENST00000462723 RETREG2Q8NC44 543 aa8.99□□□□□ -0.97
RPA3-205ENST00000462723 RAET1EQ8TD07 263 aa8.99□□□□□ -0.97
RPA3-205ENST00000462723 TMEM143Q96AN5 459 aa8.99□□□□□ -0.97
RPA3-205ENST00000462723 TRIM44Q96DX7 344 aaPredicted RBP8.99□□□□□ -0.97
RPA3-205ENST00000462723 CEP89Q96ST8 783 aa8.99□□□□□ -0.97
RPA3-205ENST00000462723 NTPCRQ9BSD7 190 aaKnown RBP8.99□□□□□ -0.97
RPA3-205ENST00000462723 PRR14Q9BWN1 585 aa8.99□□□□□ -0.97
RPA3-205ENST00000462723 STRA6Q9BX79 667 aa8.99□□□□□ -0.97
RPA3-205ENST00000462723 GBP3Q9H0R5 595 aa8.99□□□□□ -0.97
RPA3-205ENST00000462723 RNPEPQ9H4A4 650 aa8.99□□□□□ -0.97
RPA3-205ENST00000462723 SPC25Q9HBM1 224 aa8.99□□□□□ -0.97
RPA3-205ENST00000462723 CGNQ9P2M7 1197 aaKnown RBP8.99□□□□□ -0.97
RPA3-205ENST00000462723 EXOC7Q9UPT5 735 aa8.99□□□□□ -0.97
RPA3-205ENST00000462723 IGKV6-21A0A0C4DH24 114 aa8.98□□□□□ -0.97
RPA3-205ENST00000462723 A0A1B0GTH6 734 aa8.98□□□□□ -0.97
RPA3-205ENST00000462723 DENND3A2RUS2 1198 aa8.98□□□□□ -0.97
RPA3-205ENST00000462723 LRRC10BA6NIK2 292 aa8.98□□□□□ -0.97
RPA3-205ENST00000462723 ZBTB42B2RXF5 422 aa8.98□□□□□ -0.97
RPA3-205ENST00000462723 N4BP3O15049 544 aa8.98□□□□□ -0.97
RPA3-205ENST00000462723 SEPT4O43236 478 aa8.98□□□□□ -0.97
RPA3-205ENST00000462723 HMGCRP04035 888 aa8.98□□□□□ -0.97
RPA3-205ENST00000462723 NR3C1P04150 777 aa8.98□□□□□ -0.97
RPA3-205ENST00000462723 RARBP10826 455 aa8.98□□□□□ -0.97
RPA3-205ENST00000462723 INSRRP14616 1297 aa8.98□□□□□ -0.97
RPA3-205ENST00000462723 ELNP15502 786 aa8.98□□□□□ -0.97
RPA3-205ENST00000462723 NR2F2P24468 414 aa8.98□□□□□ -0.97
RPA3-205ENST00000462723 NAMPTP43490 491 aa8.98□□□□□ -0.97
RPA3-205ENST00000462723 MTIF2P46199 727 aaKnown RBP8.98□□□□□ -0.97
RPA3-205ENST00000462723 COPB1P53618 953 aaKnown RBP8.98□□□□□ -0.97
RPA3-205ENST00000462723 PRMT2P55345 433 aa8.98□□□□□ -0.97
RPA3-205ENST00000462723 SNRPFP62306 86 aaKnown RBP8.98□□□□□ -0.97
RPA3-205ENST00000462723 GTF2BQ00403 316 aa8.98□□□□□ -0.97
RPA3-205ENST00000462723 CACNB2Q08289 660 aaPredicted RBP8.98□□□□□ -0.97
RPA3-205ENST00000462723 PPFIA1Q13136 1202 aa8.98□□□□□ -0.97
RPA3-205ENST00000462723 ADAM9Q13443 819 aa8.98□□□□□ -0.97
RPA3-205ENST00000462723 MXD4Q14582 209 aaPredicted RBP8.98□□□□□ -0.97
RPA3-205ENST00000462723 FSCN1Q16658 493 aaKnown RBP8.98□□□□□ -0.97
RPA3-205ENST00000462723 CCDC40Q4G0X9 1142 aa8.98□□□□□ -0.97
RPA3-205ENST00000462723 FILIP1Q7Z7B0 1213 aa8.98□□□□□ -0.97
RPA3-205ENST00000462723 IRF2BP1Q8IU81 584 aa8.98□□□□□ -0.97
RPA3-205ENST00000462723 TMEM161BQ8NDZ6 487 aa8.98□□□□□ -0.97
RPA3-205ENST00000462723 TRPV1Q8NER1 839 aa8.98□□□□□ -0.97
RPA3-205ENST00000462723 DEPTORQ8TB45 409 aa8.98□□□□□ -0.97
RPA3-205ENST00000462723 PSPC1Q8WXF1 523 aaKnown RBP8.98□□□□□ -0.97
RPA3-205ENST00000462723 BSNDQ8WZ55 320 aa8.98□□□□□ -0.97
RPA3-205ENST00000462723 LENG1Q96BZ8 264 aaPredicted RBP8.98□□□□□ -0.97
RPA3-205ENST00000462723 CNOT6LQ96LI5 555 aaKnown RBP8.98□□□□□ -0.97
RPA3-205ENST00000462723 SUGCTQ9HAC7 445 aa8.98□□□□□ -0.97
RPA3-205ENST00000462723 ZMYM2Q9UBW7 1377 aa8.98□□□□□ -0.97
RPA3-205ENST00000462723 RRN3P2A6NIE6 340 aa8.97□□□□□ -0.97
RPA3-205ENST00000462723 LRRIQ4A6NIV6 560 aa8.97□□□□□ -0.97
RPA3-205ENST00000462723 SLC16A3O15427 465 aaKnown RBP8.97□□□□□ -0.97
RPA3-205ENST00000462723 ASAP2O43150 1006 aa8.97□□□□□ -0.97
RPA3-205ENST00000462723 TGFB1I1O43294 461 aa8.97□□□□□ -0.97
RPA3-205ENST00000462723 ZEB2O60315 1214 aa8.97□□□□□ -0.97
RPA3-205ENST00000462723 C22orf31O95567 290 aa8.97□□□□□ -0.97
RPA3-205ENST00000462723 F2P00734 622 aa8.97□□□□□ -0.97
RPA3-205ENST00000462723 MYL3P08590 195 aa8.97□□□□□ -0.97
RPA3-205ENST00000462723 C6orf222P0C671 652 aaPredicted RBP8.97□□□□□ -0.97
RPA3-205ENST00000462723 HSPA6P17066 643 aa8.97□□□□□ -0.97
RPA3-205ENST00000462723 GLRA2P23416 452 aa8.97□□□□□ -0.97
RPA3-205ENST00000462723 TMOD1P28289 359 aa8.97□□□□□ -0.97
RPA3-205ENST00000462723 CLCN1P35523 988 aa8.97□□□□□ -0.97
RPA3-205ENST00000462723 EFNA5P52803 228 aa8.97□□□□□ -0.97
RPA3-205ENST00000462723 GJA9P57773 515 aa8.97□□□□□ -0.97
RPA3-205ENST00000462723 IGBP1P78318 339 aa8.97□□□□□ -0.97
RPA3-205ENST00000462723 CAP1Q01518 475 aa8.97□□□□□ -0.97
RPA3-205ENST00000462723 KCNA1Q09470 495 aa8.97□□□□□ -0.97
RPA3-205ENST00000462723 STRN3Q13033 797 aa8.97□□□□□ -0.97
RPA3-205ENST00000462723 TFDP1Q14186 410 aa8.97□□□□□ -0.97
RPA3-205ENST00000462723 MYBPC2Q14324 1141 aa8.97□□□□□ -0.97
RPA3-205ENST00000462723 NR1I3Q14994 352 aa8.97□□□□□ -0.97
RPA3-205ENST00000462723 GRIK4Q16099 956 aa8.97□□□□□ -0.97
RPA3-205ENST00000462723 NFIL3Q16649 462 aa8.97□□□□□ -0.97
RPA3-205ENST00000462723 EFCAB12Q6NXP0 572 aa8.97□□□□□ -0.97
RPA3-205ENST00000462723 APTXQ7Z2E3 356 aaKnown RBP8.97□□□□□ -0.97
RPA3-205ENST00000462723 KSR1Q8IVT5 923 aa8.97□□□□□ -0.97
RPA3-205ENST00000462723 ZC3H3Q8IXZ2 948 aaKnown RBP8.97□□□□□ -0.97
RPA3-205ENST00000462723 METTL13Q8N6R0 699 aa8.97□□□□□ -0.97
RPA3-205ENST00000462723 SPC24Q8NBT2 197 aa8.97□□□□□ -0.97
RPA3-205ENST00000462723 ASAP3Q8TDY4 903 aa8.97□□□□□ -0.97
RPA3-205ENST00000462723 PXYLP1Q8TE99 480 aa8.97□□□□□ -0.97
RPA3-205ENST00000462723 ZNF296Q8WUU4 475 aaPredicted RBP8.97□□□□□ -0.97
RPA3-205ENST00000462723 TRAPPC12Q8WVT3 735 aa8.97□□□□□ -0.97
RPA3-205ENST00000462723 PRPF31Q8WWY3 499 aaKnown RBP8.97□□□□□ -0.97
RPA3-205ENST00000462723 EEF2KMTQ96G04 330 aa8.97□□□□□ -0.97
RPA3-205ENST00000462723 NAP1L5Q96NT1 182 aaPredicted RBP8.97□□□□□ -0.97
RPA3-205ENST00000462723 TUBGCP2Q9BSJ2 902 aa8.97□□□□□ -0.97
RPA3-205ENST00000462723 KATNAL1Q9BW62 490 aa8.97□□□□□ -0.97
RPA3-205ENST00000462723 UPF3AQ9H1J1 476 aaKnown RBP8.97□□□□□ -0.97
RPA3-205ENST00000462723 VPS16Q9H269 839 aa8.97□□□□□ -0.97
RPA3-205ENST00000462723 AGPAT3Q9NRZ7 376 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms