RNA–Protein interactions for RNA: ENST00000453858.1

SBDSP1-204, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

BASIC

Gene SBDSP1, Length 737 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-204ENST00000453858 NRLP54845 237 aa6.34□□□□□ -1.39
SBDSP1-204ENST00000453858 TIMM10P62072 90 aa6.34□□□□□ -1.39
SBDSP1-204ENST00000453858 PLAURQ03405 335 aa6.34□□□□□ -1.39
SBDSP1-204ENST00000453858 AASDHQ4L235 1098 aaPredicted RBP6.34□□□□□ -1.39
SBDSP1-204ENST00000453858 OTOP3Q7RTS5 596 aa6.34□□□□□ -1.39
SBDSP1-204ENST00000453858 CMTR2Q8IYT2 770 aaKnown RBP6.34□□□□□ -1.39
SBDSP1-204ENST00000453858 OR13H1Q8NG92 308 aa6.34□□□□□ -1.39
SBDSP1-204ENST00000453858 CASP10Q92851 521 aa6.34□□□□□ -1.39
SBDSP1-204ENST00000453858 ACSF2Q96CM8 615 aaPredicted RBP6.34□□□□□ -1.39
SBDSP1-204ENST00000453858 STK31Q9BXU1 1019 aa6.34□□□□□ -1.39
SBDSP1-204ENST00000453858 OXCT2Q9BYC2 517 aaPredicted RBP6.34□□□□□ -1.39
SBDSP1-204ENST00000453858 KRTAP4-6Q9BYQ5 205 aa6.34□□□□□ -1.39
SBDSP1-204ENST00000453858 SLC38A10Q9HBR0 1119 aa6.34□□□□□ -1.39
SBDSP1-204ENST00000453858 C9orf78Q9NZ63 289 aaPredicted RBP6.34□□□□□ -1.39
SBDSP1-204ENST00000453858 DBR1Q9UK59 544 aaKnown RBP6.34□□□□□ -1.39
SBDSP1-204ENST00000453858 KANSL1LA0AUZ9 987 aa6.33□□□□□ -1.4
SBDSP1-204ENST00000453858 ENO4A6NNW6 628 aa6.33□□□□□ -1.4
SBDSP1-204ENST00000453858 CPNE3O75131 537 aaKnown RBP6.33□□□□□ -1.4
SBDSP1-204ENST00000453858 PHACTR2O75167 634 aa6.33□□□□□ -1.4
SBDSP1-204ENST00000453858 POU3F2P20265 443 aaPredicted RBP6.33□□□□□ -1.4
SBDSP1-204ENST00000453858 ALAS2P22557 587 aa6.33□□□□□ -1.4
SBDSP1-204ENST00000453858 THPOP40225 353 aa6.33□□□□□ -1.4
SBDSP1-204ENST00000453858 GNAI1P63096 354 aa6.33□□□□□ -1.4
SBDSP1-204ENST00000453858 SCAPQ12770 1279 aa6.33□□□□□ -1.4
SBDSP1-204ENST00000453858 BRDTQ58F21 947 aaPredicted RBP6.33□□□□□ -1.4
SBDSP1-204ENST00000453858 RNFT1Q5M7Z0 435 aa6.33□□□□□ -1.4
SBDSP1-204ENST00000453858 FAM83BQ5T0W9 1011 aa6.33□□□□□ -1.4
SBDSP1-204ENST00000453858 ZNF385CQ66K41 422 aaPredicted RBP6.33□□□□□ -1.4
SBDSP1-204ENST00000453858 PCSK4Q6UW60 755 aa6.33□□□□□ -1.4
SBDSP1-204ENST00000453858 TMEM179Q6ZVK1 233 aa6.33□□□□□ -1.4
SBDSP1-204ENST00000453858 DHX32Q7L7V1 743 aaKnown RBP6.33□□□□□ -1.4
SBDSP1-204ENST00000453858 RTN4RL1Q86UN2 441 aaPredicted RBP6.33□□□□□ -1.4
SBDSP1-204ENST00000453858 CPXCR1Q8N123 301 aa6.33□□□□□ -1.4
SBDSP1-204ENST00000453858 AFG1LQ8WV93 481 aa6.33□□□□□ -1.4
SBDSP1-204ENST00000453858 APBB2Q92870 758 aa6.33□□□□□ -1.4
SBDSP1-204ENST00000453858 GPR20Q99678 358 aa6.33□□□□□ -1.4
SBDSP1-204ENST00000453858 SLF1Q9BQI6 1058 aa6.33□□□□□ -1.4
SBDSP1-204ENST00000453858 NIF3L1Q9GZT8 377 aa6.33□□□□□ -1.4
SBDSP1-204ENST00000453858 BCL11AQ9H165 835 aa6.33□□□□□ -1.4
SBDSP1-204ENST00000453858 RAVER2Q9HCJ3 691 aaKnown RBP6.33□□□□□ -1.4
SBDSP1-204ENST00000453858 ASCC3Q8N3C0 2202 aaKnown RBP6.33□□□□□ -1.4
SBDSP1-204ENST00000453858 MIA3Q5JRA6 1907 aa6.33□□□□□ -1.4
SBDSP1-204ENST00000453858 PCNX1Q96RV3 2341 aa6.32□□□□□ -1.4
SBDSP1-204ENST00000453858 FRMPD2Q68DX3 1309 aaPredicted RBP6.32□□□□□ -1.4
SBDSP1-204ENST00000453858 CACNA1FO60840 1977 aa6.32□□□□□ -1.4
SBDSP1-204ENST00000453858 SHISA7A6NL88 538 aa6.32□□□□□ -1.4
SBDSP1-204ENST00000453858 FAM170BA6NMN3 283 aa6.32□□□□□ -1.4
SBDSP1-204ENST00000453858 F5H6K3 240 aa6.32□□□□□ -1.4
SBDSP1-204ENST00000453858 PYCARD-AS1I3L0S3 204 aa6.32□□□□□ -1.4
SBDSP1-204ENST00000453858 GPR182O15218 404 aa6.32□□□□□ -1.4
SBDSP1-204ENST00000453858 MMP20O60882 483 aa6.32□□□□□ -1.4
SBDSP1-204ENST00000453858 CLASP2O75122 1294 aaKnown RBP6.32□□□□□ -1.4
SBDSP1-204ENST00000453858 ALDH1L1O75891 902 aa6.32□□□□□ -1.4
SBDSP1-204ENST00000453858 FGF18O76093 207 aa6.32□□□□□ -1.4
SBDSP1-204ENST00000453858 WISP1O95388 367 aa6.32□□□□□ -1.4
SBDSP1-204ENST00000453858 CSRP1P21291 193 aaKnown RBP6.32□□□□□ -1.4
SBDSP1-204ENST00000453858 CES1P23141 567 aa6.32□□□□□ -1.4
SBDSP1-204ENST00000453858 HOXC8P31273 242 aa6.32□□□□□ -1.4
SBDSP1-204ENST00000453858 MAGEA9P43362 315 aa6.32□□□□□ -1.4
SBDSP1-204ENST00000453858 RPS9P46781 194 aaKnown RBP6.32□□□□□ -1.4
SBDSP1-204ENST00000453858 CHMP4BP1P59074 171 aa6.32□□□□□ -1.4
SBDSP1-204ENST00000453858 DYNLL1P63167 89 aaKnown RBP6.32□□□□□ -1.4
SBDSP1-204ENST00000453858 GPLD1P80108 840 aa6.32□□□□□ -1.4
SBDSP1-204ENST00000453858 APOBRQ0VD83 1088 aa6.32□□□□□ -1.4
SBDSP1-204ENST00000453858 HYAL2Q12891 473 aa6.32□□□□□ -1.4
SBDSP1-204ENST00000453858 MTAPQ13126 283 aa6.32□□□□□ -1.4
SBDSP1-204ENST00000453858 SIM2Q14190 667 aaPredicted RBP6.32□□□□□ -1.4
SBDSP1-204ENST00000453858 KRTAP21-3Q3LHN1 58 aa6.32□□□□□ -1.4
SBDSP1-204ENST00000453858 RARS2Q5T160 578 aaKnown RBP6.32□□□□□ -1.4
SBDSP1-204ENST00000453858 ALG1LQ6GMV1 187 aa6.32□□□□□ -1.4
SBDSP1-204ENST00000453858 CCDC62Q6P9F0 684 aa6.32□□□□□ -1.4
SBDSP1-204ENST00000453858 SLCO4C1Q6ZQN7 724 aa6.32□□□□□ -1.4
SBDSP1-204ENST00000453858 KRT25Q7Z3Z0 450 aa6.32□□□□□ -1.4
SBDSP1-204ENST00000453858 TMEM151AQ8N4L1 468 aa6.32□□□□□ -1.4
SBDSP1-204ENST00000453858 MRPL43Q8N983 215 aaKnown RBP6.32□□□□□ -1.4
SBDSP1-204ENST00000453858 PRPF38AQ8NAV1 312 aaKnown RBP6.32□□□□□ -1.4
SBDSP1-204ENST00000453858 SPATA5Q8NB90 893 aa6.32□□□□□ -1.4
SBDSP1-204ENST00000453858 FBF1Q8TES7 1133 aa6.32□□□□□ -1.4
SBDSP1-204ENST00000453858 NXPE3Q969Y0 559 aa6.32□□□□□ -1.4
SBDSP1-204ENST00000453858 SPACA7Q96KW9 195 aa6.32□□□□□ -1.4
SBDSP1-204ENST00000453858 MYADMQ96S97 322 aa6.32□□□□□ -1.4
SBDSP1-204ENST00000453858 EHMT1Q9H9B1 1298 aa6.32□□□□□ -1.4
SBDSP1-204ENST00000453858 RAI14Q9P0K7 980 aa6.32□□□□□ -1.4
SBDSP1-204ENST00000453858 TMEM63CQ9P1W3 806 aa6.32□□□□□ -1.4
SBDSP1-204ENST00000453858 ZFATQ9P243 1243 aa6.32□□□□□ -1.4
SBDSP1-204ENST00000453858 EPS15L1Q9UBC2 864 aa6.32□□□□□ -1.4
SBDSP1-204ENST00000453858 LZTS1Q9Y250 596 aa6.32□□□□□ -1.4
SBDSP1-204ENST00000453858 RAXQ9Y2V3 346 aa6.32□□□□□ -1.4
SBDSP1-204ENST00000453858 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.32□□□□□ -1.4
SBDSP1-204ENST00000453858 HIVEP1P15822 2718 aa6.32□□□□□ -1.4
SBDSP1-204ENST00000453858 NBEAL1Q6ZS30 2694 aa6.32□□□□□ -1.4
SBDSP1-204ENST00000453858 ELOA3CA0A087WX78 387 aaPredicted RBP6.31□□□□□ -1.4
SBDSP1-204ENST00000453858 ELOA3DA6NLF2 546 aaPredicted RBP6.31□□□□□ -1.4
SBDSP1-204ENST00000453858 ANHXE9PGG2 379 aa6.31□□□□□ -1.4
SBDSP1-204ENST00000453858 NKRFO15226 690 aaKnown RBP eCLIP6.31□□□□□ -1.4
SBDSP1-204ENST00000453858 CIAO1O76071 339 aa6.31□□□□□ -1.4
SBDSP1-204ENST00000453858 ARIH2O95376 493 aa6.31□□□□□ -1.4
SBDSP1-204ENST00000453858 EEF2P13639 858 aaKnown RBP6.31□□□□□ -1.4
SBDSP1-204ENST00000453858 EDN3P14138 238 aa6.31□□□□□ -1.4
SBDSP1-204ENST00000453858 OAZ1P54368 228 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms