RNA–Protein interactions for RNA: ENST00000444502.5

TOP3B-210, Transcript of DNA topoisomerase III beta, humanhuman

TSL 2

Gene TOP3B, Length 4,163 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-210ENST00000444502 EPHA7Q15375 998 aa11.38□□□□□ -0.59
TOP3B-210ENST00000444502 NBPF20Q3BBV1 942 aa11.38□□□□□ -0.59
TOP3B-210ENST00000444502 ZNF568Q3ZCX4 644 aa11.38□□□□□ -0.59
TOP3B-210ENST00000444502 GLYCTKQ8IVS8 523 aa11.38□□□□□ -0.59
TOP3B-210ENST00000444502 LRRC71Q8N4P6 559 aa11.38□□□□□ -0.59
TOP3B-210ENST00000444502 MRRFQ96E11 262 aaKnown RBP11.38□□□□□ -0.59
TOP3B-210ENST00000444502 HESX1Q9UBX0 185 aa11.38□□□□□ -0.59
TOP3B-210ENST00000444502 MTUS1Q9ULD2 1270 aa11.38□□□□□ -0.59
TOP3B-210ENST00000444502 PPP1R9AQ9ULJ8 1098 aa11.38□□□□□ -0.59
TOP3B-210ENST00000444502 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.38□□□□□ -0.59
TOP3B-210ENST00000444502 ZNF233A6NK53 670 aa11.38□□□□□ -0.59
TOP3B-210ENST00000444502 GOLGA8SH3BPF8 625 aa11.38□□□□□ -0.59
TOP3B-210ENST00000444502 ZBTB39O15060 712 aa11.38□□□□□ -0.59
TOP3B-210ENST00000444502 ICAM1P05362 532 aa11.38□□□□□ -0.59
TOP3B-210ENST00000444502 ARP10275 920 aa11.38□□□□□ -0.59
TOP3B-210ENST00000444502 DRAP1Q14919 205 aaPredicted RBP11.38□□□□□ -0.59
TOP3B-210ENST00000444502 HAUS6Q7Z4H7 955 aa11.38□□□□□ -0.59
TOP3B-210ENST00000444502 SPATA4Q8NEY3 305 aa11.38□□□□□ -0.59
TOP3B-210ENST00000444502 HAS1Q92839 578 aa11.38□□□□□ -0.59
TOP3B-210ENST00000444502 SH3GL3Q99963 347 aa11.38□□□□□ -0.59
TOP3B-210ENST00000444502 FAM53CQ9NYF3 392 aa11.38□□□□□ -0.59
TOP3B-210ENST00000444502 SNX12Q9UMY4 172 aa11.38□□□□□ -0.59
TOP3B-210ENST00000444502 TLR3O15455 904 aaKnown RBP11.38□□□□□ -0.59
TOP3B-210ENST00000444502 MYBL1P10243 752 aa11.38□□□□□ -0.59
TOP3B-210ENST00000444502 RANBP1P43487 201 aa11.38□□□□□ -0.59
TOP3B-210ENST00000444502 PTK2Q05397 1052 aa11.38□□□□□ -0.59
TOP3B-210ENST00000444502 PPFIA1Q13136 1202 aa11.38□□□□□ -0.59
TOP3B-210ENST00000444502 PDCLQ13371 301 aa11.38□□□□□ -0.59
TOP3B-210ENST00000444502 OR6J1Q8NGC5 347 aa11.38□□□□□ -0.59
TOP3B-210ENST00000444502 SCFD1Q8WVM8 642 aa11.38□□□□□ -0.59
TOP3B-210ENST00000444502 ASB14A6NK59 587 aa11.38□□□□□ -0.59
TOP3B-210ENST00000444502 FAM86B1E9PN63 330 aa11.38□□□□□ -0.59
TOP3B-210ENST00000444502 FAM86B2P0C5J1 330 aa11.38□□□□□ -0.59
TOP3B-210ENST00000444502 UCHL3P15374 230 aa11.38□□□□□ -0.59
TOP3B-210ENST00000444502 KLRC1P26715 233 aa11.38□□□□□ -0.59
TOP3B-210ENST00000444502 KRT71Q3SY84 523 aa11.38□□□□□ -0.59
TOP3B-210ENST00000444502 COMMD10Q9Y6G5 202 aa11.38□□□□□ -0.59
TOP3B-210ENST00000444502 COL18A1P39060 1754 aa11.37□□□□□ -0.59
TOP3B-210ENST00000444502 PDXKO00764 312 aa11.37□□□□□ -0.59
TOP3B-210ENST00000444502 EPHB6O15197 1021 aa11.37□□□□□ -0.59
TOP3B-210ENST00000444502 PPP1R11O60927 126 aaPredicted RBP11.37□□□□□ -0.59
TOP3B-210ENST00000444502 IFNB1P01574 187 aa11.37□□□□□ -0.59
TOP3B-210ENST00000444502 CALCOCO2Q13137 446 aa11.37□□□□□ -0.59
TOP3B-210ENST00000444502 LRRC45Q96CN5 670 aa11.37□□□□□ -0.59
TOP3B-210ENST00000444502 MXRA8Q9BRK3 442 aa11.37□□□□□ -0.59
TOP3B-210ENST00000444502 KIFC3Q9BVG8 833 aa11.37□□□□□ -0.59
TOP3B-210ENST00000444502 SPEF2Q9C093 1822 aa11.37□□□□□ -0.59
TOP3B-210ENST00000444502 BAZ2AQ9UIF9 1905 aaKnown RBP11.37□□□□□ -0.59
TOP3B-210ENST00000444502 A0A087X0T9 212 aa11.37□□□□□ -0.59
TOP3B-210ENST00000444502 FAM228BP0C875 321 aa11.37□□□□□ -0.59
TOP3B-210ENST00000444502 CTNNA1P35221 906 aaKnown RBP11.37□□□□□ -0.59
TOP3B-210ENST00000444502 COL14A1Q05707 1796 aaKnown RBP11.37□□□□□ -0.59
TOP3B-210ENST00000444502 VGLL4Q14135 290 aa11.37□□□□□ -0.59
TOP3B-210ENST00000444502 XXYLT1Q8NBI6 393 aa11.37□□□□□ -0.59
TOP3B-210ENST00000444502 CDCA5Q96FF9 252 aa11.37□□□□□ -0.59
TOP3B-210ENST00000444502 THOC1Q96FV9 657 aaKnown RBP11.37□□□□□ -0.59
TOP3B-210ENST00000444502 ANKRD36BP1Q96IX9 119 aa11.37□□□□□ -0.59
TOP3B-210ENST00000444502 NAP1L3Q99457 506 aaPredicted RBP11.37□□□□□ -0.59
TOP3B-210ENST00000444502 PPANQ9NQ55 473 aaKnown RBP11.37□□□□□ -0.59
TOP3B-210ENST00000444502 STIM2Q9P246 746 aa11.37□□□□□ -0.59
TOP3B-210ENST00000444502 CAPN9O14815 690 aa11.37□□□□□ -0.59
TOP3B-210ENST00000444502 THAP12O43422 761 aa11.37□□□□□ -0.59
TOP3B-210ENST00000444502 ONECUT3O60422 494 aaPredicted RBP11.37□□□□□ -0.59
TOP3B-210ENST00000444502 NSFP46459 744 aaKnown RBP11.37□□□□□ -0.59
TOP3B-210ENST00000444502 ECM1Q16610 540 aa11.37□□□□□ -0.59
TOP3B-210ENST00000444502 RPF1Q9H9Y2 349 aaKnown RBP11.37□□□□□ -0.59
TOP3B-210ENST00000444502 MTRF1LQ9UGC7 380 aaKnown RBP11.37□□□□□ -0.59
TOP3B-210ENST00000444502 ASIC3Q9UHC3 531 aa11.37□□□□□ -0.59
TOP3B-210ENST00000444502 GIT2Q14161 759 aa11.36□□□□□ -0.59
TOP3B-210ENST00000444502 PPP2R5DQ14738 602 aa11.36□□□□□ -0.59
TOP3B-210ENST00000444502 RINT1Q6NUQ1 792 aa11.36□□□□□ -0.59
TOP3B-210ENST00000444502 FBXO16Q8IX29 292 aaPredicted RBP11.36□□□□□ -0.59
TOP3B-210ENST00000444502 SYT2Q8N9I0 419 aaPredicted RBP11.36□□□□□ -0.59
TOP3B-210ENST00000444502 SEPT1Q8WYJ6 367 aa11.36□□□□□ -0.59
TOP3B-210ENST00000444502 GMCL1Q96IK5 515 aa11.36□□□□□ -0.59
TOP3B-210ENST00000444502 P2RX7Q99572 595 aaKnown RBP11.36□□□□□ -0.59
TOP3B-210ENST00000444502 KLC4Q9NSK0 619 aa11.36□□□□□ -0.59
TOP3B-210ENST00000444502 NID2Q14112 1375 aa11.36□□□□□ -0.59
TOP3B-210ENST00000444502 PGRMC1O00264 195 aaKnown RBP11.36□□□□□ -0.59
TOP3B-210ENST00000444502 KIF3CO14782 793 aa11.36□□□□□ -0.59
TOP3B-210ENST00000444502 MYZAPP0CAP1 466 aa11.36□□□□□ -0.59
TOP3B-210ENST00000444502 EPHB4P54760 987 aa11.36□□□□□ -0.59
TOP3B-210ENST00000444502 ZNF211Q13398 564 aaPredicted RBP11.36□□□□□ -0.59
TOP3B-210ENST00000444502 GNASQ5JWF2 1037 aa11.36□□□□□ -0.59
TOP3B-210ENST00000444502 MFSD14CQ5VZR4 134 aa11.36□□□□□ -0.59
TOP3B-210ENST00000444502 CLMNQ96JQ2 1002 aa11.36□□□□□ -0.59
TOP3B-210ENST00000444502 FAM167AQ96KS9 214 aa11.36□□□□□ -0.59
TOP3B-210ENST00000444502 DDX47Q9H0S4 455 aaKnown RBP11.36□□□□□ -0.59
TOP3B-210ENST00000444502 SH3BP1Q9Y3L3 701 aa11.36□□□□□ -0.59
TOP3B-210ENST00000444502 IKBKGQ9Y6K9 419 aa11.36□□□□□ -0.59
TOP3B-210ENST00000444502 LRP6O75581 1613 aa11.36□□□□□ -0.59
TOP3B-210ENST00000444502 A0A1W2PRG0 241 aa11.36□□□□□ -0.59
TOP3B-210ENST00000444502 E7EVH7 732 aa11.36□□□□□ -0.59
TOP3B-210ENST00000444502 TBX3O15119 743 aa11.36□□□□□ -0.59
TOP3B-210ENST00000444502 ATF7P17544 494 aaPredicted RBP11.36□□□□□ -0.59
TOP3B-210ENST00000444502 GGCXP38435 758 aa11.36□□□□□ -0.59
TOP3B-210ENST00000444502 PRKCEQ02156 737 aa11.36□□□□□ -0.59
TOP3B-210ENST00000444502 SLC18A3Q16572 532 aa11.36□□□□□ -0.59
TOP3B-210ENST00000444502 FRMD5Q7Z6J6 570 aa11.36□□□□□ -0.59
TOP3B-210ENST00000444502 PURBQ96QR8 312 aaKnown RBP11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms