RNA–Protein interactions for RNA: ENST00000439765.3

CCDC188-201, Transcript of coiled-coil domain containing 188, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CCDC188, Length 1,475 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188-201ENST00000439765 TMEM87AQ8NBN3 555 aa19.54■□□□□ 0.72
CCDC188-201ENST00000439765 RNF169Q8NCN4 708 aa19.54■□□□□ 0.72
CCDC188-201ENST00000439765 CCSER1Q9C0I3 900 aa19.54■□□□□ 0.72
CCDC188-201ENST00000439765 DACT1Q9NYF0 836 aa19.54■□□□□ 0.72
CCDC188-201ENST00000439765 RWDD3Q9Y3V2 267 aa19.54■□□□□ 0.72
CCDC188-201ENST00000439765 PCDHB7Q9Y5E2 793 aa19.54■□□□□ 0.72
CCDC188-201ENST00000439765 SLC26A4O43511 780 aa19.54■□□□□ 0.72
CCDC188-201ENST00000439765 HIP1RO75146 1068 aa19.54■□□□□ 0.72
CCDC188-201ENST00000439765 RB1P06400 928 aa19.54■□□□□ 0.72
CCDC188-201ENST00000439765 SLC12A3P55017 1021 aa19.54■□□□□ 0.72
CCDC188-201ENST00000439765 TIGD5Q53EQ6 642 aa19.54■□□□□ 0.72
CCDC188-201ENST00000439765 C1orf186Q6ZWK4 172 aa19.54■□□□□ 0.72
CCDC188-201ENST00000439765 IFNLR1Q8IU57 520 aaPredicted RBP19.54■□□□□ 0.72
CCDC188-201ENST00000439765 SYT2Q8N9I0 419 aaPredicted RBP19.54■□□□□ 0.72
CCDC188-201ENST00000439765 KIFAP3Q92845 792 aa19.54■□□□□ 0.72
CCDC188-201ENST00000439765 CLP1Q92989 425 aaKnown RBP19.54■□□□□ 0.72
CCDC188-201ENST00000439765 BLOC1S4Q9NUP1 217 aa19.54■□□□□ 0.72
CCDC188-201ENST00000439765 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP19.53■□□□□ 0.72
CCDC188-201ENST00000439765 GOLGA6L22H0YM25 854 aa19.53■□□□□ 0.72
CCDC188-201ENST00000439765 TSPAN1O60635 241 aa19.53■□□□□ 0.72
CCDC188-201ENST00000439765 FGFR1P11362 822 aa19.53■□□□□ 0.72
CCDC188-201ENST00000439765 MCM4P33991 863 aa19.53■□□□□ 0.72
CCDC188-201ENST00000439765 BTG3Q14201 252 aaPredicted RBP19.53■□□□□ 0.72
CCDC188-201ENST00000439765 PPP2R5AQ15172 486 aa19.53■□□□□ 0.72
CCDC188-201ENST00000439765 CDCA2Q69YH5 1023 aaPredicted RBP19.53■□□□□ 0.72
CCDC188-201ENST00000439765 ECHDC2Q86YB7 292 aa19.53■□□□□ 0.72
CCDC188-201ENST00000439765 ZBTB8OSQ8IWT0 167 aa19.53■□□□□ 0.72
CCDC188-201ENST00000439765 DAW1Q8N136 415 aa19.53■□□□□ 0.72
CCDC188-201ENST00000439765 DEPTORQ8TB45 409 aa19.53■□□□□ 0.72
CCDC188-201ENST00000439765 CPB2Q96IY4 423 aa19.53■□□□□ 0.72
CCDC188-201ENST00000439765 NFKBIZQ9BYH8 718 aa19.53■□□□□ 0.72
CCDC188-201ENST00000439765 CHST12Q9NRB3 414 aa19.53■□□□□ 0.72
CCDC188-201ENST00000439765 TMEM161AQ9NX61 479 aa19.53■□□□□ 0.72
CCDC188-201ENST00000439765 PCDHA7Q9UN72 937 aa19.53■□□□□ 0.72
CCDC188-201ENST00000439765 B4GALT5O43286 388 aa19.52■□□□□ 0.72
CCDC188-201ENST00000439765 PRPF40AO75400 957 aaKnown RBP19.52■□□□□ 0.72
CCDC188-201ENST00000439765 LIG1P18858 919 aa19.52■□□□□ 0.72
CCDC188-201ENST00000439765 NAMPTP43490 491 aa19.52■□□□□ 0.72
CCDC188-201ENST00000439765 ME1P48163 572 aa19.52■□□□□ 0.72
CCDC188-201ENST00000439765 CACNB1Q02641 598 aaPredicted RBP19.52■□□□□ 0.72
CCDC188-201ENST00000439765 POU5F1BQ06416 359 aa19.52■□□□□ 0.72
CCDC188-201ENST00000439765 MAPK7Q13164 816 aa19.52■□□□□ 0.72
CCDC188-201ENST00000439765 MCM6Q14566 821 aa19.52■□□□□ 0.72
CCDC188-201ENST00000439765 LONRF3Q496Y0 759 aa19.52■□□□□ 0.72
CCDC188-201ENST00000439765 GPBP1Q86WP2 473 aa19.52■□□□□ 0.72
CCDC188-201ENST00000439765 KCTD17Q8N5Z5 321 aa19.52■□□□□ 0.72
CCDC188-201ENST00000439765 LARP4BQ92615 738 aaKnown RBP19.52■□□□□ 0.72
CCDC188-201ENST00000439765 RAD54LQ92698 747 aa19.52■□□□□ 0.72
CCDC188-201ENST00000439765 IFT74Q96LB3 600 aa19.52■□□□□ 0.72
CCDC188-201ENST00000439765 DRC1Q96MC2 740 aa19.52■□□□□ 0.72
CCDC188-201ENST00000439765 UBE2ZQ9H832 354 aaPredicted RBP19.52■□□□□ 0.72
CCDC188-201ENST00000439765 CCDC39Q9UFE4 941 aa19.52■□□□□ 0.72
CCDC188-201ENST00000439765 NPHP3-ACAD11A0A0J9YXS1 232 aa19.51■□□□□ 0.71
CCDC188-201ENST00000439765 A0A0U1RQF3 1178 aa19.51■□□□□ 0.71
CCDC188-201ENST00000439765 ATF7P17544 494 aaPredicted RBP19.51■□□□□ 0.71
CCDC188-201ENST00000439765 GUCY2CP25092 1073 aa19.51■□□□□ 0.71
CCDC188-201ENST00000439765 CTNNB1P35222 781 aa19.51■□□□□ 0.71
CCDC188-201ENST00000439765 BMPR1AP36894 532 aa19.51■□□□□ 0.71
CCDC188-201ENST00000439765 DMP1Q13316 513 aaPredicted RBP19.51■□□□□ 0.71
CCDC188-201ENST00000439765 AMHR2Q16671 573 aa19.51■□□□□ 0.71
CCDC188-201ENST00000439765 AXDND1Q5T1B0 1012 aaPredicted RBP19.51■□□□□ 0.71
CCDC188-201ENST00000439765 CMTR2Q8IYT2 770 aaKnown RBP19.51■□□□□ 0.71
CCDC188-201ENST00000439765 NECAB3Q96P71 396 aaPredicted RBP19.51■□□□□ 0.71
CCDC188-201ENST00000439765 C11orf84Q9BUA3 381 aaPredicted RBP19.51■□□□□ 0.71
CCDC188-201ENST00000439765 LMAN2LQ9H0V9 348 aa19.51■□□□□ 0.71
CCDC188-201ENST00000439765 FAM105AQ9NUU6 356 aa19.51■□□□□ 0.71
CCDC188-201ENST00000439765 TDRD15B5MCY1 1934 aaKnown RBP19.51■□□□□ 0.71
CCDC188-201ENST00000439765 A0A087X0B3 334 aa19.5■□□□□ 0.71
CCDC188-201ENST00000439765 SFI1A8K8P3 1242 aa19.5■□□□□ 0.71
CCDC188-201ENST00000439765 CUTAO60888 179 aa19.5■□□□□ 0.71
CCDC188-201ENST00000439765 ARF4P18085 180 aaPredicted RBP19.5■□□□□ 0.71
CCDC188-201ENST00000439765 HOXA11P31270 313 aaPredicted RBP19.5■□□□□ 0.71
CCDC188-201ENST00000439765 PEX3P56589 373 aa19.5■□□□□ 0.71
CCDC188-201ENST00000439765 FAM189BP81408 668 aa19.5■□□□□ 0.71
CCDC188-201ENST00000439765 ADALQ6DHV7 355 aa19.5■□□□□ 0.71
CCDC188-201ENST00000439765 LPPQ93052 612 aa19.5■□□□□ 0.71
CCDC188-201ENST00000439765 REEP2Q9BRK0 252 aa19.5■□□□□ 0.71
CCDC188-201ENST00000439765 C2orf40Q9H1Z8 148 aa19.5■□□□□ 0.71
CCDC188-201ENST00000439765 ELAC1Q9H777 363 aaKnown RBP19.5■□□□□ 0.71
CCDC188-201ENST00000439765 LMBRD1Q9NUN5 540 aa19.5■□□□□ 0.71
CCDC188-201ENST00000439765 RNF216Q9NWF9 866 aaPredicted RBP19.5■□□□□ 0.71
CCDC188-201ENST00000439765 MRPL42Q9Y6G3 142 aaKnown RBP19.5■□□□□ 0.71
CCDC188-201ENST00000439765 CCDC169A6NNP5 214 aa19.49■□□□□ 0.71
CCDC188-201ENST00000439765 TBKBP1A7MCY6 615 aa19.49■□□□□ 0.71
CCDC188-201ENST00000439765 COL19A1Q14993 1142 aa19.49■□□□□ 0.71
CCDC188-201ENST00000439765 PCBP1Q15365 356 aaKnown RBP eCLIP19.49■□□□□ 0.71
CCDC188-201ENST00000439765 ARSHQ5FYA8 562 aa19.49■□□□□ 0.71
CCDC188-201ENST00000439765 RRAGBQ5VZM2 374 aa19.49■□□□□ 0.71
CCDC188-201ENST00000439765 NOTUMQ6P988 496 aa19.49■□□□□ 0.71
CCDC188-201ENST00000439765 CDR2LQ86X02 465 aaPredicted RBP19.49■□□□□ 0.71
CCDC188-201ENST00000439765 PDILTQ8N807 584 aa19.49■□□□□ 0.71
CCDC188-201ENST00000439765 TIPINQ9BVW5 301 aa19.49■□□□□ 0.71
CCDC188-201ENST00000439765 PLVAPQ9BX97 442 aa19.49■□□□□ 0.71
CCDC188-201ENST00000439765 PANK2Q9BZ23 570 aa19.49■□□□□ 0.71
CCDC188-201ENST00000439765 NSUN3Q9H649 340 aaKnown RBP19.49■□□□□ 0.71
CCDC188-201ENST00000439765 RNF19AQ9NV58 838 aa19.49■□□□□ 0.71
CCDC188-201ENST00000439765 PRMT7Q9NVM4 692 aaPredicted RBP19.49■□□□□ 0.71
CCDC188-201ENST00000439765 KCND2Q9NZV8 630 aa19.49■□□□□ 0.71
CCDC188-201ENST00000439765 HCSTQ9UBK5 93 aa19.49■□□□□ 0.71
CCDC188-201ENST00000439765 STK17AQ9UEE5 414 aa19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms