RNA–Protein interactions for RNA: ENST00000433260.1

HMGB3P24-201, Transcript of high mobility group box 3 pseudogene 24, humanhuman

BASIC

Gene HMGB3P24, Length 622 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P24-201ENST00000433260 MINDY3Q9H8M7 445 aa6.41□□□□□ -1.38
HMGB3P24-201ENST00000433260 ATP6V0A4Q9HBG4 840 aa6.41□□□□□ -1.38
HMGB3P24-201ENST00000433260 RGS18Q9NS28 235 aa6.41□□□□□ -1.38
HMGB3P24-201ENST00000433260 DNM3Q9UQ16 869 aa6.41□□□□□ -1.38
HMGB3P24-201ENST00000433260 INSL6Q9Y581 213 aa6.41□□□□□ -1.38
HMGB3P24-201ENST00000433260 NPHP3-ACAD11A0A0J9YXS1 232 aa6.4□□□□□ -1.38
HMGB3P24-201ENST00000433260 LINC01553A4QN01 128 aa6.4□□□□□ -1.38
HMGB3P24-201ENST00000433260 SFI1A8K8P3 1242 aa6.4□□□□□ -1.38
HMGB3P24-201ENST00000433260 INO80B-WBP1J3KQ70 363 aa6.4□□□□□ -1.38
HMGB3P24-201ENST00000433260 ASAP2O43150 1006 aa6.4□□□□□ -1.38
HMGB3P24-201ENST00000433260 AP1G2O75843 785 aa6.4□□□□□ -1.38
HMGB3P24-201ENST00000433260 EYA4O95677 639 aa6.4□□□□□ -1.38
HMGB3P24-201ENST00000433260 F13A1P00488 732 aa6.4□□□□□ -1.38
HMGB3P24-201ENST00000433260 STAG3L1P0CL83 205 aa6.4□□□□□ -1.38
HMGB3P24-201ENST00000433260 ZSCAN22P10073 491 aaPredicted RBP6.4□□□□□ -1.38
HMGB3P24-201ENST00000433260 FOSL2P15408 326 aa6.4□□□□□ -1.38
HMGB3P24-201ENST00000433260 GLRA2P23416 452 aa6.4□□□□□ -1.38
HMGB3P24-201ENST00000433260 ARL2P36404 184 aa6.4□□□□□ -1.38
HMGB3P24-201ENST00000433260 COPS2P61201 443 aa6.4□□□□□ -1.38
HMGB3P24-201ENST00000433260 GRB10Q13322 594 aa6.4□□□□□ -1.38
HMGB3P24-201ENST00000433260 TFDP1Q14186 410 aa6.4□□□□□ -1.38
HMGB3P24-201ENST00000433260 BTG3Q14201 252 aaPredicted RBP6.4□□□□□ -1.38
HMGB3P24-201ENST00000433260 KARSQ15046 597 aaKnown RBP6.4□□□□□ -1.38
HMGB3P24-201ENST00000433260 STK38Q15208 465 aa6.4□□□□□ -1.38
HMGB3P24-201ENST00000433260 PTPAQ15257 358 aa6.4□□□□□ -1.38
HMGB3P24-201ENST00000433260 QPCTQ16769 361 aa6.4□□□□□ -1.38
HMGB3P24-201ENST00000433260 PAN2Q504Q3 1202 aaKnown RBP6.4□□□□□ -1.38
HMGB3P24-201ENST00000433260 ARL6IP4Q66PJ3 421 aaKnown RBP6.4□□□□□ -1.38
HMGB3P24-201ENST00000433260 BLOC1S3Q6QNY0 202 aa6.4□□□□□ -1.38
HMGB3P24-201ENST00000433260 USP49Q70CQ1 688 aa6.4□□□□□ -1.38
HMGB3P24-201ENST00000433260 SLC24A5Q71RS6 500 aa6.4□□□□□ -1.38
HMGB3P24-201ENST00000433260 CATSPER4Q7RTX7 472 aa6.4□□□□□ -1.38
HMGB3P24-201ENST00000433260 KCNK18Q7Z418 384 aa6.4□□□□□ -1.38
HMGB3P24-201ENST00000433260 CABP7Q86V35 215 aa6.4□□□□□ -1.38
HMGB3P24-201ENST00000433260 RETREG3Q86VR2 466 aa6.4□□□□□ -1.38
HMGB3P24-201ENST00000433260 CDR2LQ86X02 465 aaPredicted RBP6.4□□□□□ -1.38
HMGB3P24-201ENST00000433260 SPNS2Q8IVW8 549 aa6.4□□□□□ -1.38
HMGB3P24-201ENST00000433260 SCUBE3Q8IX30 993 aa6.4□□□□□ -1.38
HMGB3P24-201ENST00000433260 FIBCD1Q8N539 461 aa6.4□□□□□ -1.38
HMGB3P24-201ENST00000433260 RNF149Q8NC42 400 aa6.4□□□□□ -1.38
HMGB3P24-201ENST00000433260 TSC1Q92574 1164 aa6.4□□□□□ -1.38
HMGB3P24-201ENST00000433260 EPSTI1Q96J88 318 aa6.4□□□□□ -1.38
HMGB3P24-201ENST00000433260 CHAMP1Q96JM3 812 aa6.4□□□□□ -1.38
HMGB3P24-201ENST00000433260 ZNF396Q96N95 335 aaPredicted RBP6.4□□□□□ -1.38
HMGB3P24-201ENST00000433260 C17orf80Q9BSJ5 609 aa6.4□□□□□ -1.38
HMGB3P24-201ENST00000433260 INO80BQ9C086 356 aaPredicted RBP6.4□□□□□ -1.38
HMGB3P24-201ENST00000433260 CSRNP2Q9H175 543 aa6.4□□□□□ -1.38
HMGB3P24-201ENST00000433260 IFT122Q9HBG6 1241 aa6.4□□□□□ -1.38
HMGB3P24-201ENST00000433260 PRM3Q9NNZ6 103 aa6.4□□□□□ -1.38
HMGB3P24-201ENST00000433260 DBR1Q9UK59 544 aaKnown RBP6.4□□□□□ -1.38
HMGB3P24-201ENST00000433260 PCDHGC3Q9UN70 934 aa6.4□□□□□ -1.38
HMGB3P24-201ENST00000433260 USP20Q9Y2K6 914 aa6.4□□□□□ -1.38
HMGB3P24-201ENST00000433260 NLRC5Q86WI3 1866 aa6.4□□□□□ -1.39
HMGB3P24-201ENST00000433260 CEP290O15078 2479 aa6.39□□□□□ -1.39
HMGB3P24-201ENST00000433260 MYH11P35749 1972 aa6.39□□□□□ -1.39
HMGB3P24-201ENST00000433260 EPOPA6NHQ4 379 aa6.39□□□□□ -1.39
HMGB3P24-201ENST00000433260 LRRIQ4A6NIV6 560 aa6.39□□□□□ -1.39
HMGB3P24-201ENST00000433260 CCDC169A6NNP5 214 aa6.39□□□□□ -1.39
HMGB3P24-201ENST00000433260 TBKBP1A7MCY6 615 aa6.39□□□□□ -1.39
HMGB3P24-201ENST00000433260 C9IYK1 514 aa6.39□□□□□ -1.39
HMGB3P24-201ENST00000433260 DGKIO75912 1065 aa6.39□□□□□ -1.39
HMGB3P24-201ENST00000433260 CSPG5O95196 566 aa6.39□□□□□ -1.39
HMGB3P24-201ENST00000433260 FGFR1P11362 822 aa6.39□□□□□ -1.39
HMGB3P24-201ENST00000433260 CYP11B2P19099 503 aa6.39□□□□□ -1.39
HMGB3P24-201ENST00000433260 SFPQP23246 707 aaKnown RBP eCLIP6.39□□□□□ -1.39
HMGB3P24-201ENST00000433260 SARSP49591 514 aaKnown RBP6.39□□□□□ -1.39
HMGB3P24-201ENST00000433260 HTRA4P83105 476 aaPredicted RBP6.39□□□□□ -1.39
HMGB3P24-201ENST00000433260 CAPSQ13938 189 aa6.39□□□□□ -1.39
HMGB3P24-201ENST00000433260 BECN1Q14457 450 aa6.39□□□□□ -1.39
HMGB3P24-201ENST00000433260 DSC3Q14574 896 aa6.39□□□□□ -1.39
HMGB3P24-201ENST00000433260 MXD4Q14582 209 aaPredicted RBP6.39□□□□□ -1.39
HMGB3P24-201ENST00000433260 SLC39A14Q15043 492 aa6.39□□□□□ -1.39
HMGB3P24-201ENST00000433260 SPOUT1Q5T280 376 aaKnown RBP6.39□□□□□ -1.39
HMGB3P24-201ENST00000433260 TWF2Q6IBS0 349 aaKnown RBP6.39□□□□□ -1.39
HMGB3P24-201ENST00000433260 RINT1Q6NUQ1 792 aa6.39□□□□□ -1.39
HMGB3P24-201ENST00000433260 SRGAP1Q7Z6B7 1085 aa6.39□□□□□ -1.39
HMGB3P24-201ENST00000433260 ZNF410Q86VK4 478 aa6.39□□□□□ -1.39
HMGB3P24-201ENST00000433260 MICALL1Q8N3F8 863 aa6.39□□□□□ -1.39
HMGB3P24-201ENST00000433260 LPPQ93052 612 aa6.39□□□□□ -1.39
HMGB3P24-201ENST00000433260 CALML4Q96GE6 196 aa6.39□□□□□ -1.39
HMGB3P24-201ENST00000433260 CPB2Q96IY4 423 aa6.39□□□□□ -1.39
HMGB3P24-201ENST00000433260 GAS2L1Q99501 681 aaPredicted RBP6.39□□□□□ -1.39
HMGB3P24-201ENST00000433260 USB1Q9BQ65 265 aaKnown RBP6.39□□□□□ -1.39
HMGB3P24-201ENST00000433260 IL21Q9HBE4 155 aa6.39□□□□□ -1.39
HMGB3P24-201ENST00000433260 C1orf112Q9NSG2 853 aa6.39□□□□□ -1.39
HMGB3P24-201ENST00000433260 FBXO2Q9UK22 296 aaPredicted RBP6.39□□□□□ -1.39
HMGB3P24-201ENST00000433260 PIN4Q9Y237 131 aaKnown RBP6.39□□□□□ -1.39
HMGB3P24-201ENST00000433260 PPME1Q9Y570 386 aa6.39□□□□□ -1.39
HMGB3P24-201ENST00000433260 FNDC1Q4ZHG4 1894 aaPredicted RBP6.39□□□□□ -1.39
HMGB3P24-201ENST00000433260 MEIS3P2A8K0S8 358 aa6.38□□□□□ -1.39
HMGB3P24-201ENST00000433260 SPTLC2O15270 562 aa6.38□□□□□ -1.39
HMGB3P24-201ENST00000433260 B4GALT5O43286 388 aa6.38□□□□□ -1.39
HMGB3P24-201ENST00000433260 GAS2O43903 313 aaKnown RBP6.38□□□□□ -1.39
HMGB3P24-201ENST00000433260 HIP1RO75146 1068 aa6.38□□□□□ -1.39
HMGB3P24-201ENST00000433260 ERLIN2O94905 339 aa6.38□□□□□ -1.39
HMGB3P24-201ENST00000433260 BMP15O95972 392 aa6.38□□□□□ -1.39
HMGB3P24-201ENST00000433260 KRT18P05783 430 aaKnown RBP6.38□□□□□ -1.39
HMGB3P24-201ENST00000433260 PLA2G4BP0C869 781 aa6.38□□□□□ -1.39
HMGB3P24-201ENST00000433260 NCLP19338 710 aaKnown RBP6.38□□□□□ -1.39
HMGB3P24-201ENST00000433260 MUTP22033 750 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms