RNA–Protein interactions for RNA: ENST00000414419.6

RFFL-204, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-204ENST00000414419 KCNA5P22460 613 aa12.4□□□□□ -0.42
RFFL-204ENST00000414419 HOXA11P31270 313 aaPredicted RBP12.4□□□□□ -0.42
RFFL-204ENST00000414419 KCNQ1P51787 676 aa12.4□□□□□ -0.42
RFFL-204ENST00000414419 NOMO2Q5JPE7 1267 aa12.4□□□□□ -0.42
RFFL-204ENST00000414419 HSCBQ8IWL3 235 aa12.4□□□□□ -0.42
RFFL-204ENST00000414419 HACE1Q8IYU2 909 aa12.4□□□□□ -0.42
RFFL-204ENST00000414419 KIFAP3Q92845 792 aa12.4□□□□□ -0.42
RFFL-204ENST00000414419 PABPC5Q96DU9 382 aaKnown RBP12.4□□□□□ -0.42
RFFL-204ENST00000414419 FAM193BQ96PV7 902 aaPredicted RBP12.4□□□□□ -0.42
RFFL-204ENST00000414419 CSRNP2Q9H175 543 aa12.4□□□□□ -0.42
RFFL-204ENST00000414419 IGFLR1Q9H665 355 aa12.4□□□□□ -0.42
RFFL-204ENST00000414419 RSAD1Q9HA92 442 aa12.4□□□□□ -0.42
RFFL-204ENST00000414419 UBN1Q9NPG3 1134 aa12.4□□□□□ -0.42
RFFL-204ENST00000414419 TLR9Q9NR96 1032 aa12.4□□□□□ -0.42
RFFL-204ENST00000414419 PRMT7Q9NVM4 692 aaPredicted RBP12.4□□□□□ -0.42
RFFL-204ENST00000414419 CLDND1Q9NY35 253 aa12.4□□□□□ -0.42
RFFL-204ENST00000414419 SPG21Q9NZD8 308 aa12.4□□□□□ -0.42
RFFL-204ENST00000414419 KANSL3Q9P2N6 904 aa12.4□□□□□ -0.42
RFFL-204ENST00000414419 NCOR1O75376 2440 aa12.4□□□□□ -0.42
RFFL-204ENST00000414419 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.39□□□□□ -0.43
RFFL-204ENST00000414419 ZC3H11AO75152 810 aaKnown RBP eCLIP12.39□□□□□ -0.43
RFFL-204ENST00000414419 OFD1O75665 1012 aa12.39□□□□□ -0.43
RFFL-204ENST00000414419 SSBP05455 408 aaKnown RBP eCLIP12.39□□□□□ -0.43
RFFL-204ENST00000414419 ARF4P18085 180 aaPredicted RBP12.39□□□□□ -0.43
RFFL-204ENST00000414419 LIG1P18858 919 aa12.39□□□□□ -0.43
RFFL-204ENST00000414419 NCLP19338 710 aaKnown RBP12.39□□□□□ -0.43
RFFL-204ENST00000414419 DNAJB1P25685 340 aa12.39□□□□□ -0.43
RFFL-204ENST00000414419 UBA7P41226 1012 aa12.39□□□□□ -0.43
RFFL-204ENST00000414419 NAMPTP43490 491 aa12.39□□□□□ -0.43
RFFL-204ENST00000414419 PLCB3Q01970 1234 aa12.39□□□□□ -0.43
RFFL-204ENST00000414419 BMS1Q14692 1282 aaKnown RBP12.39□□□□□ -0.43
RFFL-204ENST00000414419 SF3A1Q15459 793 aaKnown RBP12.39□□□□□ -0.43
RFFL-204ENST00000414419 MAPK6Q16659 721 aa12.39□□□□□ -0.43
RFFL-204ENST00000414419 PDE12Q6L8Q7 609 aaKnown RBP12.39□□□□□ -0.43
RFFL-204ENST00000414419 MRPL10Q7Z7H8 261 aaKnown RBP12.39□□□□□ -0.43
RFFL-204ENST00000414419 KCTD17Q8N5Z5 321 aa12.39□□□□□ -0.43
RFFL-204ENST00000414419 RASSF8Q8NHQ8 419 aa12.39□□□□□ -0.43
RFFL-204ENST00000414419 ADAMTS19Q8TE59 1207 aa12.39□□□□□ -0.43
RFFL-204ENST00000414419 MRPS27Q92552 414 aaKnown RBP12.39□□□□□ -0.43
RFFL-204ENST00000414419 SNX21Q969T3 373 aa12.39□□□□□ -0.43
RFFL-204ENST00000414419 CALML4Q96GE6 196 aa12.39□□□□□ -0.43
RFFL-204ENST00000414419 PRIMPOLQ96LW4 560 aa12.39□□□□□ -0.43
RFFL-204ENST00000414419 AK8Q96MA6 479 aa12.39□□□□□ -0.43
RFFL-204ENST00000414419 GBP3Q9H0R5 595 aa12.39□□□□□ -0.43
RFFL-204ENST00000414419 LZTS1Q9Y250 596 aa12.39□□□□□ -0.43
RFFL-204ENST00000414419 MEIS3P2A8K0S8 358 aa12.38□□□□□ -0.43
RFFL-204ENST00000414419 BMP1P13497 986 aa12.38□□□□□ -0.43
RFFL-204ENST00000414419 IRS1P35568 1242 aa12.38□□□□□ -0.43
RFFL-204ENST00000414419 PBX3P40426 434 aa12.38□□□□□ -0.43
RFFL-204ENST00000414419 EFNA5P52803 228 aa12.38□□□□□ -0.43
RFFL-204ENST00000414419 BCAR1P56945 870 aa12.38□□□□□ -0.43
RFFL-204ENST00000414419 PRPF4BQ13523 1007 aaKnown RBP12.38□□□□□ -0.43
RFFL-204ENST00000414419 CAMK1Q14012 370 aa12.38□□□□□ -0.43
RFFL-204ENST00000414419 UBXN11Q5T124 520 aa12.38□□□□□ -0.43
RFFL-204ENST00000414419 CDCA2Q69YH5 1023 aaPredicted RBP12.38□□□□□ -0.43
RFFL-204ENST00000414419 SLC27A1Q6PCB7 646 aa12.38□□□□□ -0.43
RFFL-204ENST00000414419 AGMOQ6ZNB7 445 aa12.38□□□□□ -0.43
RFFL-204ENST00000414419 RBM23Q86U06 439 aaKnown RBP12.38□□□□□ -0.43
RFFL-204ENST00000414419 CABP7Q86V35 215 aa12.38□□□□□ -0.43
RFFL-204ENST00000414419 TMEM169Q96HH4 297 aa12.38□□□□□ -0.43
RFFL-204ENST00000414419 DRC1Q96MC2 740 aa12.38□□□□□ -0.43
RFFL-204ENST00000414419 PLIN2Q99541 437 aa12.38□□□□□ -0.43
RFFL-204ENST00000414419 MMTAG2Q9BU76 263 aaKnown RBP12.38□□□□□ -0.43
RFFL-204ENST00000414419 APOL6Q9BWW8 343 aa12.38□□□□□ -0.43
RFFL-204ENST00000414419 EIF2AQ9BY44 585 aaKnown RBP12.38□□□□□ -0.43
RFFL-204ENST00000414419 TLE6Q9H808 572 aa12.38□□□□□ -0.43
RFFL-204ENST00000414419 POLD4Q9HCU8 107 aa12.38□□□□□ -0.43
RFFL-204ENST00000414419 ENTPD7Q9NQZ7 604 aa12.38□□□□□ -0.43
RFFL-204ENST00000414419 TBC1D13Q9NVG8 400 aa12.38□□□□□ -0.43
RFFL-204ENST00000414419 IPPQ9Y573 584 aa12.38□□□□□ -0.43
RFFL-204ENST00000414419 A0A1B0GUA9 196 aa12.37□□□□□ -0.43
RFFL-204ENST00000414419 FSD2A1L4K1 749 aa12.37□□□□□ -0.43
RFFL-204ENST00000414419 CCDC169A6NNP5 214 aa12.37□□□□□ -0.43
RFFL-204ENST00000414419 NT5C1B-RDH14C9J2C7 533 aa12.37□□□□□ -0.43
RFFL-204ENST00000414419 K7ERI5 159 aa12.37□□□□□ -0.43
RFFL-204ENST00000414419 N4BP3O15049 544 aa12.37□□□□□ -0.43
RFFL-204ENST00000414419 B4GALT5O43286 388 aa12.37□□□□□ -0.43
RFFL-204ENST00000414419 SLC26A4O43511 780 aa12.37□□□□□ -0.43
RFFL-204ENST00000414419 STX6O43752 255 aa12.37□□□□□ -0.43
RFFL-204ENST00000414419 NPTXRO95502 500 aa12.37□□□□□ -0.43
RFFL-204ENST00000414419 ALDH2P05091 517 aa12.37□□□□□ -0.43
RFFL-204ENST00000414419 PRKCBP05771 671 aa12.37□□□□□ -0.43
RFFL-204ENST00000414419 CA8P35219 290 aa12.37□□□□□ -0.43
RFFL-204ENST00000414419 LONP1P36776 959 aaKnown RBP12.37□□□□□ -0.43
RFFL-204ENST00000414419 NRIP1P48552 1158 aa12.37□□□□□ -0.43
RFFL-204ENST00000414419 HYAL1Q12794 435 aa12.37□□□□□ -0.43
RFFL-204ENST00000414419 DMP1Q13316 513 aaPredicted RBP12.37□□□□□ -0.43
RFFL-204ENST00000414419 AMHR2Q16671 573 aa12.37□□□□□ -0.43
RFFL-204ENST00000414419 FAM187BQ17R55 369 aa12.37□□□□□ -0.43
RFFL-204ENST00000414419 PUS10Q3MIT2 529 aaKnown RBP12.37□□□□□ -0.43
RFFL-204ENST00000414419 LEXMQ3ZCV2 418 aa12.37□□□□□ -0.43
RFFL-204ENST00000414419 HYIQ5T013 277 aa12.37□□□□□ -0.43
RFFL-204ENST00000414419 RINT1Q6NUQ1 792 aa12.37□□□□□ -0.43
RFFL-204ENST00000414419 PPP4R3CPQ6ZMV5 832 aa12.37□□□□□ -0.43
RFFL-204ENST00000414419 TMC7Q7Z402 723 aa12.37□□□□□ -0.43
RFFL-204ENST00000414419 CDR2LQ86X02 465 aaPredicted RBP12.37□□□□□ -0.43
RFFL-204ENST00000414419 SLC39A11Q8N1S5 342 aa12.37□□□□□ -0.43
RFFL-204ENST00000414419 TMEM87AQ8NBN3 555 aa12.37□□□□□ -0.43
RFFL-204ENST00000414419 SMG8Q8ND04 991 aaKnown RBP12.37□□□□□ -0.43
RFFL-204ENST00000414419 BSNDQ8WZ55 320 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms