RNA–Protein interactions for RNA: ENST00000409588.1

NIF3L1-205, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,269 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-205ENST00000409588 FSCN2O14926 492 aa16.15■□□□□ 0.18
NIF3L1-205ENST00000409588 EYA4O95677 639 aa16.15■□□□□ 0.18
NIF3L1-205ENST00000409588 ATF7P17544 494 aaPredicted RBP16.15■□□□□ 0.18
NIF3L1-205ENST00000409588 HOXA11P31270 313 aaPredicted RBP16.15■□□□□ 0.18
NIF3L1-205ENST00000409588 FOSBP53539 338 aa16.15■□□□□ 0.18
NIF3L1-205ENST00000409588 COASYQ13057 564 aa16.15■□□□□ 0.18
NIF3L1-205ENST00000409588 ZNF174Q15697 407 aa16.15■□□□□ 0.18
NIF3L1-205ENST00000409588 SMAD2Q15796 467 aaKnown RBP16.15■□□□□ 0.18
NIF3L1-205ENST00000409588 NOMO2Q5JPE7 1267 aa16.15■□□□□ 0.18
NIF3L1-205ENST00000409588 NOTUMQ6P988 496 aa16.15■□□□□ 0.18
NIF3L1-205ENST00000409588 TMEM184AQ6ZMB5 413 aa16.15■□□□□ 0.18
NIF3L1-205ENST00000409588 HACE1Q8IYU2 909 aa16.15■□□□□ 0.18
NIF3L1-205ENST00000409588 GJD3Q8N144 294 aa16.15■□□□□ 0.18
NIF3L1-205ENST00000409588 KCTD17Q8N5Z5 321 aa16.15■□□□□ 0.18
NIF3L1-205ENST00000409588 URGCPQ8TCY9 931 aa16.15■□□□□ 0.18
NIF3L1-205ENST00000409588 HELQQ8TDG4 1101 aa16.15■□□□□ 0.18
NIF3L1-205ENST00000409588 POP1Q99575 1024 aaKnown RBP16.15■□□□□ 0.18
NIF3L1-205ENST00000409588 XPNPEP1Q9NQW7 623 aa16.15■□□□□ 0.18
NIF3L1-205ENST00000409588 CD207Q9UJ71 328 aa16.15■□□□□ 0.18
NIF3L1-205ENST00000409588 WNT7AO00755 349 aa16.14■□□□□ 0.17
NIF3L1-205ENST00000409588 OFD1O75665 1012 aa16.14■□□□□ 0.17
NIF3L1-205ENST00000409588 NCLP19338 710 aaKnown RBP16.14■□□□□ 0.17
NIF3L1-205ENST00000409588 IRS1P35568 1242 aa16.14■□□□□ 0.17
NIF3L1-205ENST00000409588 NRIP1P48552 1158 aa16.14■□□□□ 0.17
NIF3L1-205ENST00000409588 NDUFV1P49821 464 aa16.14■□□□□ 0.17
NIF3L1-205ENST00000409588 SMAD4Q13485 552 aaKnown RBP16.14■□□□□ 0.17
NIF3L1-205ENST00000409588 SLC39A11Q8N1S5 342 aa16.14■□□□□ 0.17
NIF3L1-205ENST00000409588 C4orf32Q8N8J7 132 aa16.14■□□□□ 0.17
NIF3L1-205ENST00000409588 PIGOQ8TEQ8 1089 aa16.14■□□□□ 0.17
NIF3L1-205ENST00000409588 TMEM169Q96HH4 297 aa16.14■□□□□ 0.17
NIF3L1-205ENST00000409588 PRIMPOLQ96LW4 560 aa16.14■□□□□ 0.17
NIF3L1-205ENST00000409588 NECAB3Q96P71 396 aaPredicted RBP16.14■□□□□ 0.17
NIF3L1-205ENST00000409588 TCF20Q9UGU0 1960 aaKnown RBP16.14■□□□□ 0.17
NIF3L1-205ENST00000409588 BRWD1Q9NSI6 2320 aa16.14■□□□□ 0.17
NIF3L1-205ENST00000409588 ALDH2P05091 517 aa16.13■□□□□ 0.17
NIF3L1-205ENST00000409588 ALADP13716 330 aa16.13■□□□□ 0.17
NIF3L1-205ENST00000409588 PRPHP41219 470 aa16.13■□□□□ 0.17
NIF3L1-205ENST00000409588 BCAR1P56945 870 aa16.13■□□□□ 0.17
NIF3L1-205ENST00000409588 ERVFC1P60507 584 aa16.13■□□□□ 0.17
NIF3L1-205ENST00000409588 RNASELQ05823 741 aaKnown RBP16.13■□□□□ 0.17
NIF3L1-205ENST00000409588 SMC1AQ14683 1233 aaKnown RBP16.13■□□□□ 0.17
NIF3L1-205ENST00000409588 DUSP6Q16828 381 aa16.13■□□□□ 0.17
NIF3L1-205ENST00000409588 RILPL1Q5EBL4 403 aa16.13■□□□□ 0.17
NIF3L1-205ENST00000409588 TMC7Q7Z402 723 aa16.13■□□□□ 0.17
NIF3L1-205ENST00000409588 ADHFE1Q8IWW8 467 aa16.13■□□□□ 0.17
NIF3L1-205ENST00000409588 MRPL43Q8N983 215 aaKnown RBP16.13■□□□□ 0.17
NIF3L1-205ENST00000409588 MSLNLQ96KJ4 702 aa16.13■□□□□ 0.17
NIF3L1-205ENST00000409588 TCF25Q9BQ70 676 aa16.13■□□□□ 0.17
NIF3L1-205ENST00000409588 CSRNP2Q9H175 543 aa16.13■□□□□ 0.17
NIF3L1-205ENST00000409588 C2orf40Q9H1Z8 148 aa16.13■□□□□ 0.17
NIF3L1-205ENST00000409588 MINDY3Q9H8M7 445 aa16.13■□□□□ 0.17
NIF3L1-205ENST00000409588 LRWD1Q9UFC0 647 aa16.13■□□□□ 0.17
NIF3L1-205ENST00000409588 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.13■□□□□ 0.17
NIF3L1-205ENST00000409588 IRAK3Q9Y616 596 aa16.13■□□□□ 0.17
NIF3L1-205ENST00000409588 PI4K2BG5E9Z4 385 aa16.12■□□□□ 0.17
NIF3L1-205ENST00000409588 INO80B-WBP1J3KQ70 363 aa16.12■□□□□ 0.17
NIF3L1-205ENST00000409588 MBTPS2O43462 519 aa16.12■□□□□ 0.17
NIF3L1-205ENST00000409588 IL9P15248 144 aa16.12■□□□□ 0.17
NIF3L1-205ENST00000409588 HOXB8P17481 243 aaPredicted RBP16.12■□□□□ 0.17
NIF3L1-205ENST00000409588 CYP11B2P19099 503 aa16.12■□□□□ 0.17
NIF3L1-205ENST00000409588 PPP2R5AQ15172 486 aa16.12■□□□□ 0.17
NIF3L1-205ENST00000409588 DDX53Q86TM3 631 aaKnown RBP16.12■□□□□ 0.17
NIF3L1-205ENST00000409588 IGSF22Q8N9C0 903 aa16.12■□□□□ 0.17
NIF3L1-205ENST00000409588 TMX3Q96JJ7 454 aa16.12■□□□□ 0.17
NIF3L1-205ENST00000409588 FAM193BQ96PV7 902 aaPredicted RBP16.12■□□□□ 0.17
NIF3L1-205ENST00000409588 TMEM175Q9BSA9 504 aa16.12■□□□□ 0.17
NIF3L1-205ENST00000409588 RSAD1Q9HA92 442 aa16.12■□□□□ 0.17
NIF3L1-205ENST00000409588 ENTPD7Q9NQZ7 604 aa16.12■□□□□ 0.17
NIF3L1-205ENST00000409588 TBC1D13Q9NVG8 400 aa16.12■□□□□ 0.17
NIF3L1-205ENST00000409588 KCNG1Q9UIX4 513 aa16.12■□□□□ 0.17
NIF3L1-205ENST00000409588 A0A1B0GUA9 196 aa16.11■□□□□ 0.17
NIF3L1-205ENST00000409588 ARHGEF35A5YM69 484 aa16.11■□□□□ 0.17
NIF3L1-205ENST00000409588 INPPL1O15357 1258 aa16.11■□□□□ 0.17
NIF3L1-205ENST00000409588 TSPAN1O60635 241 aa16.11■□□□□ 0.17
NIF3L1-205ENST00000409588 MED24O75448 989 aa16.11■□□□□ 0.17
NIF3L1-205ENST00000409588 GALTP07902 379 aa16.11■□□□□ 0.17
NIF3L1-205ENST00000409588 ITGA4P13612 1032 aa16.11■□□□□ 0.17
NIF3L1-205ENST00000409588 GLRA2P23416 452 aa16.11■□□□□ 0.17
NIF3L1-205ENST00000409588 SSTR3P32745 418 aaPredicted RBP16.11■□□□□ 0.17
NIF3L1-205ENST00000409588 GTF2F1P35269 517 aaKnown RBP eCLIP16.11■□□□□ 0.17
NIF3L1-205ENST00000409588 MBTD1Q05BQ5 628 aa16.11■□□□□ 0.17
NIF3L1-205ENST00000409588 DLX2Q07687 328 aaPredicted RBP16.11■□□□□ 0.17
NIF3L1-205ENST00000409588 PTGDRQ13258 359 aa16.11■□□□□ 0.17
NIF3L1-205ENST00000409588 CAPSQ13938 189 aa16.11■□□□□ 0.17
NIF3L1-205ENST00000409588 FAM187BQ17R55 369 aa16.11■□□□□ 0.17
NIF3L1-205ENST00000409588 UBXN11Q5T124 520 aa16.11■□□□□ 0.17
NIF3L1-205ENST00000409588 PADI6Q6TGC4 694 aa16.11■□□□□ 0.17
NIF3L1-205ENST00000409588 DTHD1Q6ZMT9 781 aa16.11■□□□□ 0.17
NIF3L1-205ENST00000409588 AGMOQ6ZNB7 445 aa16.11■□□□□ 0.17
NIF3L1-205ENST00000409588 ADGRD2Q7Z7M1 963 aa16.11■□□□□ 0.17
NIF3L1-205ENST00000409588 RBM23Q86U06 439 aaKnown RBP16.11■□□□□ 0.17
NIF3L1-205ENST00000409588 ZBTB8OSQ8IWT0 167 aa16.11■□□□□ 0.17
NIF3L1-205ENST00000409588 SMRP1Q8NCR6 262 aa16.11■□□□□ 0.17
NIF3L1-205ENST00000409588 IGSF21Q96ID5 467 aa16.11■□□□□ 0.17
NIF3L1-205ENST00000409588 NRDE2Q9H7Z3 1164 aa16.11■□□□□ 0.17
NIF3L1-205ENST00000409588 PRMT7Q9NVM4 692 aaPredicted RBP16.11■□□□□ 0.17
NIF3L1-205ENST00000409588 CLEC1BQ9P126 229 aa16.11■□□□□ 0.17
NIF3L1-205ENST00000409588 MYO7AQ13402 2215 aa16.11■□□□□ 0.17
NIF3L1-205ENST00000409588 ZMYM2Q9UBW7 1377 aa16.11■□□□□ 0.17
NIF3L1-205ENST00000409588 H3BQV1 296 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms