RNA–Protein interactions for RNA: ENST00000409478.5

R3HDM1-202, Transcript of R3H domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene R3HDM1, Length 4,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-202ENST00000409478 T-ENOLP0DO92 83 aa6.25□□□□□ -1.41
R3HDM1-202ENST00000409478 RPL13P26373 211 aaKnown RBP6.25□□□□□ -1.41
R3HDM1-202ENST00000409478 USP46P62068 366 aa6.25□□□□□ -1.41
R3HDM1-202ENST00000409478 MOGSQ13724 837 aa6.25□□□□□ -1.41
R3HDM1-202ENST00000409478 TMEM259Q4ZIN3 620 aa6.25□□□□□ -1.41
R3HDM1-202ENST00000409478 ZCWPW2Q504Y3 356 aa6.25□□□□□ -1.41
R3HDM1-202ENST00000409478 SLC45A4Q5BKX6 768 aa6.25□□□□□ -1.41
R3HDM1-202ENST00000409478 KLC3Q6P597 504 aa6.25□□□□□ -1.41
R3HDM1-202ENST00000409478 RGS9BPQ6ZS82 235 aa6.25□□□□□ -1.41
R3HDM1-202ENST00000409478 CADPS2Q86UW7 1296 aa6.25□□□□□ -1.41
R3HDM1-202ENST00000409478 LRRC43Q8N309 656 aa6.25□□□□□ -1.41
R3HDM1-202ENST00000409478 VGLL2Q8N8G2 317 aa6.25□□□□□ -1.41
R3HDM1-202ENST00000409478 RFFLQ8WZ73 363 aa6.25□□□□□ -1.41
R3HDM1-202ENST00000409478 LARP4BQ92615 738 aaKnown RBP6.25□□□□□ -1.41
R3HDM1-202ENST00000409478 ISCA1Q9BUE6 129 aa6.25□□□□□ -1.41
R3HDM1-202ENST00000409478 ZFP69BQ9UJL9 534 aa6.25□□□□□ -1.41
R3HDM1-202ENST00000409478 PHTF1Q9UMS5 762 aa6.25□□□□□ -1.41
R3HDM1-202ENST00000409478 PCDHA6Q9UN73 950 aa6.25□□□□□ -1.41
R3HDM1-202ENST00000409478 PHF8Q9UPP1 1060 aa6.25□□□□□ -1.41
R3HDM1-202ENST00000409478 PCDHA8Q9Y5H6 950 aa6.25□□□□□ -1.41
R3HDM1-202ENST00000409478 DLEC1Q9Y238 1755 aa6.25□□□□□ -1.41
R3HDM1-202ENST00000409478 MYH4Q9Y623 1939 aa6.25□□□□□ -1.41
R3HDM1-202ENST00000409478 SMIM31A0A1B0GVY4 71 aa6.25□□□□□ -1.41
R3HDM1-202ENST00000409478 NBPF26B4DH59 902 aa6.25□□□□□ -1.41
R3HDM1-202ENST00000409478 DDX3XO00571 662 aaKnown RBP eCLIP6.25□□□□□ -1.415e-14■■■■□ 20.6
R3HDM1-202ENST00000409478 YY1P25490 414 aa6.25□□□□□ -1.41
R3HDM1-202ENST00000409478 SULT2A1Q06520 285 aa6.25□□□□□ -1.41
R3HDM1-202ENST00000409478 PUM3Q15397 648 aaKnown RBP6.25□□□□□ -1.41
R3HDM1-202ENST00000409478 INF2Q27J81 1249 aa6.25□□□□□ -1.41
R3HDM1-202ENST00000409478 ZNF568Q3ZCX4 644 aa6.25□□□□□ -1.41
R3HDM1-202ENST00000409478 SEPT14Q6ZU15 432 aa6.25□□□□□ -1.41
R3HDM1-202ENST00000409478 ARHGAP24Q8N264 748 aa6.25□□□□□ -1.41
R3HDM1-202ENST00000409478 ZNF398Q8TD17 642 aa6.25□□□□□ -1.41
R3HDM1-202ENST00000409478 NRG4Q8WWG1 115 aa6.25□□□□□ -1.41
R3HDM1-202ENST00000409478 CDK5RAP3Q96JB5 506 aa6.25□□□□□ -1.41
R3HDM1-202ENST00000409478 CATSPER2Q96P56 530 aa6.25□□□□□ -1.41
R3HDM1-202ENST00000409478 ZBTB3Q9H5J0 574 aa6.25□□□□□ -1.41
R3HDM1-202ENST00000409478 ERVK-5Q9HDB9 667 aa6.25□□□□□ -1.41
R3HDM1-202ENST00000409478 MLXIPLQ9NP71 852 aa6.25□□□□□ -1.41
R3HDM1-202ENST00000409478 LGALS13Q9UHV8 139 aa6.25□□□□□ -1.41
R3HDM1-202ENST00000409478 PAIP2BQ9ULR5 123 aaKnown RBP6.25□□□□□ -1.41
R3HDM1-202ENST00000409478 TBC1D30Q9Y2I9 924 aa6.25□□□□□ -1.41
R3HDM1-202ENST00000409478 ZNF330Q9Y3S2 320 aaPredicted RBP6.25□□□□□ -1.41
R3HDM1-202ENST00000409478 NR2E1Q9Y466 385 aa6.25□□□□□ -1.41
R3HDM1-202ENST00000409478 DOCK2Q92608 1830 aa6.25□□□□□ -1.41
R3HDM1-202ENST00000409478 PLCH1Q4KWH8 1693 aa6.25□□□□□ -1.41
R3HDM1-202ENST00000409478 MYMKA6NI61 221 aa6.25□□□□□ -1.41
R3HDM1-202ENST00000409478 ATP9BO43861 1147 aa6.25□□□□□ -1.41
R3HDM1-202ENST00000409478 PABPC4LP0CB38 370 aaKnown RBP6.25□□□□□ -1.41
R3HDM1-202ENST00000409478 UBTFL6P0CB48 400 aaPredicted RBP6.25□□□□□ -1.41
R3HDM1-202ENST00000409478 CTNNA2P26232 953 aa6.25□□□□□ -1.41
R3HDM1-202ENST00000409478 INHBCP55103 352 aa6.25□□□□□ -1.41
R3HDM1-202ENST00000409478 DSG1Q02413 1049 aa6.25□□□□□ -1.41
R3HDM1-202ENST00000409478 DCAF12L1Q5VU92 463 aa6.25□□□□□ -1.41
R3HDM1-202ENST00000409478 UBL4BQ8N7F7 174 aa6.25□□□□□ -1.41
R3HDM1-202ENST00000409478 NAT14Q8WUY8 206 aa6.25□□□□□ -1.41
R3HDM1-202ENST00000409478 SMC6Q96SB8 1091 aa6.25□□□□□ -1.41
R3HDM1-202ENST00000409478 BTBD10Q9BSF8 475 aa6.25□□□□□ -1.41
R3HDM1-202ENST00000409478 CDC42EP4Q9H3Q1 356 aaKnown RBP6.25□□□□□ -1.41
R3HDM1-202ENST00000409478 FAM47DPA6NHR8 397 aa6.25□□□□□ -1.41
R3HDM1-202ENST00000409478 MIF4GDA9UHW6 222 aaKnown RBP6.25□□□□□ -1.41
R3HDM1-202ENST00000409478 BTBD19C9JJ37 291 aa6.25□□□□□ -1.41
R3HDM1-202ENST00000409478 GH1P01241 217 aa6.25□□□□□ -1.41
R3HDM1-202ENST00000409478 TMEM253P0C7T8 217 aa6.25□□□□□ -1.41
R3HDM1-202ENST00000409478 ALAS1P13196 640 aa6.25□□□□□ -1.41
R3HDM1-202ENST00000409478 UCHL3P15374 230 aa6.25□□□□□ -1.41
R3HDM1-202ENST00000409478 RTP1P59025 263 aa6.25□□□□□ -1.41
R3HDM1-202ENST00000409478 BPIFB4P59827 614 aa6.25□□□□□ -1.41
R3HDM1-202ENST00000409478 NR1H3Q13133 447 aa6.25□□□□□ -1.41
R3HDM1-202ENST00000409478 TRIM28Q13263 835 aaKnown RBP6.25□□□□□ -1.41
R3HDM1-202ENST00000409478 ITGA9Q13797 1035 aa6.25□□□□□ -1.41
R3HDM1-202ENST00000409478 TAF1BQ53T94 588 aaPredicted RBP6.25□□□□□ -1.41
R3HDM1-202ENST00000409478 FAM47EQ6ZV65 393 aa6.25□□□□□ -1.41
R3HDM1-202ENST00000409478 RIBC1Q8N443 379 aaPredicted RBP6.25□□□□□ -1.41
R3HDM1-202ENST00000409478 C7orf43Q8WVR3 580 aa6.25□□□□□ -1.41
R3HDM1-202ENST00000409478 C18orf8Q96DM3 657 aa6.25□□□□□ -1.41
R3HDM1-202ENST00000409478 CCDC77Q9BR77 488 aa6.25□□□□□ -1.41
R3HDM1-202ENST00000409478 TMEM165Q9HC07 324 aa6.25□□□□□ -1.41
R3HDM1-202ENST00000409478 UBN1Q9NPG3 1134 aa6.25□□□□□ -1.41
R3HDM1-202ENST00000409478 PCDHA3Q9Y5H8 950 aa6.25□□□□□ -1.41
R3HDM1-202ENST00000409478 ATAD5Q96QE3 1844 aa6.24□□□□□ -1.41
R3HDM1-202ENST00000409478 KIF13BQ9NQT8 1826 aa6.24□□□□□ -1.41
R3HDM1-202ENST00000409478 KDM4FA0A1W2PPD8 638 aa6.24□□□□□ -1.41
R3HDM1-202ENST00000409478 CDH16O75309 829 aa6.24□□□□□ -1.41
R3HDM1-202ENST00000409478 ITGA2BP08514 1039 aa6.24□□□□□ -1.41
R3HDM1-202ENST00000409478 FGRP09769 529 aa6.24□□□□□ -1.41
R3HDM1-202ENST00000409478 PLCG2P16885 1265 aa6.24□□□□□ -1.41
R3HDM1-202ENST00000409478 VCAM1P19320 739 aa6.24□□□□□ -1.41
R3HDM1-202ENST00000409478 LMNB1P20700 586 aa6.24□□□□□ -1.41
R3HDM1-202ENST00000409478 RGS2P41220 211 aa6.24□□□□□ -1.41
R3HDM1-202ENST00000409478 FYB2Q5VWT5 728 aa6.24□□□□□ -1.41
R3HDM1-202ENST00000409478 CCDC137Q6PK04 289 aaKnown RBP6.24□□□□□ -1.41
R3HDM1-202ENST00000409478 PPP4R3CPQ6ZMV5 832 aa6.24□□□□□ -1.41
R3HDM1-202ENST00000409478 EPM2AIP1Q7L775 607 aaPredicted RBP6.24□□□□□ -1.41
R3HDM1-202ENST00000409478 PHLDB2Q86SQ0 1253 aa6.24□□□□□ -1.41
R3HDM1-202ENST00000409478 SPATA24Q86W54 205 aa6.24□□□□□ -1.41
R3HDM1-202ENST00000409478 ZBTB38Q8NAP3 1195 aaPredicted RBP6.24□□□□□ -1.41
R3HDM1-202ENST00000409478 ZBTB8BQ8NAP8 495 aaPredicted RBP6.24□□□□□ -1.41
R3HDM1-202ENST00000409478 GFM2Q969S9 779 aaKnown RBP6.24□□□□□ -1.41
R3HDM1-202ENST00000409478 MCUR1Q96AQ8 359 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms