RNA–Protein interactions for RNA: ENST00000409472.5

SCAMP4-202, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2 BASIC

Gene SCAMP4, Length 2,394 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-202ENST00000409472 ACTN2P35609 894 aa16.47■□□□□ 0.23
SCAMP4-202ENST00000409472 CNTN2Q02246 1040 aa16.47■□□□□ 0.23
SCAMP4-202ENST00000409472 CCDC91Q7Z6B0 441 aa16.47■□□□□ 0.23
SCAMP4-202ENST00000409472 UPF1Q92900 1129 aaKnown RBP eCLIP16.47■□□□□ 0.231e-7■■■■■ 49.3
SCAMP4-202ENST00000409472 ARHGEF26Q96DR7 871 aa16.47■□□□□ 0.23
SCAMP4-202ENST00000409472 CEP170P1Q96L14 293 aa16.47■□□□□ 0.23
SCAMP4-202ENST00000409472 SELENOOQ9BVL4 669 aa16.47■□□□□ 0.23
SCAMP4-202ENST00000409472 R3HDMLQ9H3Y0 253 aa16.47■□□□□ 0.23
SCAMP4-202ENST00000409472 XPNPEP1Q9NQW7 623 aa16.47■□□□□ 0.23
SCAMP4-202ENST00000409472 CEP83Q9Y592 693 aa16.47■□□□□ 0.23
SCAMP4-202ENST00000409472 ESYT3A0FGR9 886 aa16.46■□□□□ 0.23
SCAMP4-202ENST00000409472 DENND3A2RUS2 1198 aa16.46■□□□□ 0.23
SCAMP4-202ENST00000409472 BTNL10A8MVZ5 291 aa16.46■□□□□ 0.23
SCAMP4-202ENST00000409472 PHACTR2O75167 634 aa16.46■□□□□ 0.23
SCAMP4-202ENST00000409472 MYCNP04198 464 aaPredicted RBP16.46■□□□□ 0.23
SCAMP4-202ENST00000409472 KRT13P13646 458 aa16.46■□□□□ 0.23
SCAMP4-202ENST00000409472 ITIH3Q06033 890 aa16.46■□□□□ 0.23
SCAMP4-202ENST00000409472 EPC2Q52LR7 807 aa16.46■□□□□ 0.23
SCAMP4-202ENST00000409472 ZNF746Q6NUN9 644 aaPredicted RBP16.46■□□□□ 0.23
SCAMP4-202ENST00000409472 INTS8Q75QN2 995 aaKnown RBP16.46■□□□□ 0.23
SCAMP4-202ENST00000409472 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.46■□□□□ 0.235e-10■□□□□ 9.2
SCAMP4-202ENST00000409472 NSUN6Q8TEA1 469 aaKnown RBP16.46■□□□□ 0.23
SCAMP4-202ENST00000409472 RIN2Q8WYP3 895 aaPredicted RBP16.46■□□□□ 0.23
SCAMP4-202ENST00000409472 TMEM117Q9H0C3 514 aa16.46■□□□□ 0.23
SCAMP4-202ENST00000409472 ACAD9Q9H845 621 aa16.46■□□□□ 0.23
SCAMP4-202ENST00000409472 TBX20Q9UMR3 447 aa16.46■□□□□ 0.23
SCAMP4-202ENST00000409472 KCNK3O14649 394 aa16.46■□□□□ 0.23
SCAMP4-202ENST00000409472 H2AFZP0C0S5 128 aa16.46■□□□□ 0.23
SCAMP4-202ENST00000409472 CCDC172P0C7W6 258 aa16.46■□□□□ 0.23
SCAMP4-202ENST00000409472 PRKCEQ02156 737 aa16.46■□□□□ 0.23
SCAMP4-202ENST00000409472 VGLL4Q14135 290 aa16.46■□□□□ 0.23
SCAMP4-202ENST00000409472 H2AFVQ71UI9 128 aa16.46■□□□□ 0.23
SCAMP4-202ENST00000409472 C12orf56Q8IXR9 622 aa16.46■□□□□ 0.23
SCAMP4-202ENST00000409472 SAMD3Q8N6K7 520 aa16.46■□□□□ 0.23
SCAMP4-202ENST00000409472 CCDC127Q96BQ5 260 aa16.46■□□□□ 0.23
SCAMP4-202ENST00000409472 ST6GALNAC4Q9H4F1 302 aa16.46■□□□□ 0.23
SCAMP4-202ENST00000409472 JPH1Q9HDC5 661 aaPredicted RBP16.46■□□□□ 0.23
SCAMP4-202ENST00000409472 UBE2TQ9NPD8 197 aaPredicted RBP16.46■□□□□ 0.23
SCAMP4-202ENST00000409472 ANKEF1Q9NU02 776 aa16.46■□□□□ 0.23
SCAMP4-202ENST00000409472 SEPT11Q9NVA2 429 aaKnown RBP16.46■□□□□ 0.23
SCAMP4-202ENST00000409472 SEPT9Q9UHD8 586 aaPredicted RBP16.46■□□□□ 0.23
SCAMP4-202ENST00000409472 HPCAL4Q9UM19 191 aa16.46■□□□□ 0.23
SCAMP4-202ENST00000409472 SNCAIPQ9Y6H5 919 aa16.46■□□□□ 0.23
SCAMP4-202ENST00000409472 KIF4AO95239 1232 aa16.45■□□□□ 0.22
SCAMP4-202ENST00000409472 FDX1P10109 184 aa16.45■□□□□ 0.22
SCAMP4-202ENST00000409472 PAFAH1B1P43034 410 aa16.45■□□□□ 0.22
SCAMP4-202ENST00000409472 ACTR2P61160 394 aa16.45■□□□□ 0.22
SCAMP4-202ENST00000409472 MAP2K1Q02750 393 aaPredicted RBP16.45■□□□□ 0.22
SCAMP4-202ENST00000409472 CFAP221Q4G0U5 840 aa16.45■□□□□ 0.22
SCAMP4-202ENST00000409472 AENQ8WTP8 325 aaKnown RBP16.45■□□□□ 0.22
SCAMP4-202ENST00000409472 PPM1EQ8WY54 764 aa16.45■□□□□ 0.22
SCAMP4-202ENST00000409472 SEMA4DQ92854 862 aa16.45■□□□□ 0.22
SCAMP4-202ENST00000409472 TSKSQ9UJT2 592 aa16.45■□□□□ 0.22
SCAMP4-202ENST00000409472 ZNFX1Q9P2E3 1918 aaKnown RBP16.45■□□□□ 0.22
SCAMP4-202ENST00000409472 USP2O75604 605 aaPredicted RBP16.45■□□□□ 0.22
SCAMP4-202ENST00000409472 TUBBP07437 444 aa16.45■□□□□ 0.22
SCAMP4-202ENST00000409472 GLI1P08151 1106 aa16.45■□□□□ 0.22
SCAMP4-202ENST00000409472 OAZ1P54368 228 aa16.45■□□□□ 0.22
SCAMP4-202ENST00000409472 ALCAMQ13740 583 aa16.45■□□□□ 0.22
SCAMP4-202ENST00000409472 MYBPC2Q14324 1141 aa16.45■□□□□ 0.22
SCAMP4-202ENST00000409472 TRADDQ15628 312 aa16.45■□□□□ 0.22
SCAMP4-202ENST00000409472 SNRNP35Q16560 246 aaKnown RBP16.45■□□□□ 0.22
SCAMP4-202ENST00000409472 C10orf76Q5T2E6 689 aa16.45■□□□□ 0.22
SCAMP4-202ENST00000409472 C8orf74Q6P047 294 aa16.45■□□□□ 0.22
SCAMP4-202ENST00000409472 TAS1R3Q7RTX0 852 aa16.45■□□□□ 0.22
SCAMP4-202ENST00000409472 MAP4K3Q8IVH8 894 aa16.45■□□□□ 0.22
SCAMP4-202ENST00000409472 PROCA1Q8NCQ7 364 aaPredicted RBP16.45■□□□□ 0.22
SCAMP4-202ENST00000409472 TMOD4Q9NZQ9 345 aa16.45■□□□□ 0.22
SCAMP4-202ENST00000409472 CHORDC1Q9UHD1 332 aaPredicted RBP16.45■□□□□ 0.22
SCAMP4-202ENST00000409472 FAN1Q9Y2M0 1017 aa16.45■□□□□ 0.22
SCAMP4-202ENST00000409472 MYH9P35579 1960 aaKnown RBP16.45■□□□□ 0.22
SCAMP4-202ENST00000409472 PAPPA2Q9BXP8 1791 aa16.45■□□□□ 0.22
SCAMP4-202ENST00000409472 C19orf81C9J6K1 198 aa16.44■□□□□ 0.22
SCAMP4-202ENST00000409472 ADM5C9JUS6 153 aa16.44■□□□□ 0.22
SCAMP4-202ENST00000409472 CNGA1P29973 690 aa16.44■□□□□ 0.22
SCAMP4-202ENST00000409472 LMAN1P49257 510 aa16.44■□□□□ 0.22
SCAMP4-202ENST00000409472 MXI1P50539 228 aa16.44■□□□□ 0.22
SCAMP4-202ENST00000409472 DMP1Q13316 513 aaPredicted RBP16.44■□□□□ 0.22
SCAMP4-202ENST00000409472 VPS36Q86VN1 386 aa16.44■□□□□ 0.22
SCAMP4-202ENST00000409472 GPATCH11Q8N954 259 aa16.44■□□□□ 0.22
SCAMP4-202ENST00000409472 CCDC102AQ96A19 550 aa16.44■□□□□ 0.22
SCAMP4-202ENST00000409472 KRT12Q99456 494 aa16.44■□□□□ 0.22
SCAMP4-202ENST00000409472 SENP7Q9BQF6 1050 aa16.44■□□□□ 0.22
SCAMP4-202ENST00000409472 KMT5AQ9NQR1 393 aa16.44■□□□□ 0.22
SCAMP4-202ENST00000409472 STIM2Q9P246 746 aa16.44■□□□□ 0.22
SCAMP4-202ENST00000409472 VPS18Q9P253 973 aa16.44■□□□□ 0.22
SCAMP4-202ENST00000409472 SLC9A2Q9UBY0 812 aa16.44■□□□□ 0.22
SCAMP4-202ENST00000409472 RPS6KA1Q15418 735 aa16.44■□□□□ 0.22
SCAMP4-202ENST00000409472 KREMEN1Q96MU8 473 aa16.44■□□□□ 0.22
SCAMP4-202ENST00000409472 THAP2Q9H0W7 228 aa16.44■□□□□ 0.22
SCAMP4-202ENST00000409472 DICER1Q9UPY3 1922 aaKnown RBP16.43■□□□□ 0.22
SCAMP4-202ENST00000409472 BUB1BO60566 1050 aaPredicted RBP16.43■□□□□ 0.22
SCAMP4-202ENST00000409472 DDNO94850 711 aaPredicted RBP16.43■□□□□ 0.22
SCAMP4-202ENST00000409472 ATP4AP20648 1035 aa16.43■□□□□ 0.22
SCAMP4-202ENST00000409472 KIF22Q14807 665 aa16.43■□□□□ 0.22
SCAMP4-202ENST00000409472 MTERF2Q49AM1 385 aa16.43■□□□□ 0.22
SCAMP4-202ENST00000409472 XRRA1Q6P2D8 792 aa16.43■□□□□ 0.22
SCAMP4-202ENST00000409472 CYFIP1Q7L576 1253 aa16.43■□□□□ 0.22
SCAMP4-202ENST00000409472 METTL13Q8N6R0 699 aa16.43■□□□□ 0.22
SCAMP4-202ENST00000409472 BTBD7Q9P203 1132 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms