RNA–Protein interactions for RNA: ENST00000400555.7

PPP4R1-202, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PPP4R1, Length 3,885 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-202ENST00000400555 NEK9Q8TD19 979 aa13.65□□□□□ -0.22
PPP4R1-202ENST00000400555 ACTRT1Q8TDG2 376 aa13.65□□□□□ -0.22
PPP4R1-202ENST00000400555 RAPGEF5Q92565 580 aa13.65□□□□□ -0.22
PPP4R1-202ENST00000400555 NAP1L3Q99457 506 aaPredicted RBP13.65□□□□□ -0.22
PPP4R1-202ENST00000400555 HSD17B14Q9BPX1 270 aa13.65□□□□□ -0.22
PPP4R1-202ENST00000400555 KLHL11Q9NVR0 708 aa13.65□□□□□ -0.22
PPP4R1-202ENST00000400555 SUCLA2Q9P2R7 463 aaPredicted RBP13.65□□□□□ -0.22
PPP4R1-202ENST00000400555 MTUS1Q9ULD2 1270 aa13.65□□□□□ -0.22
PPP4R1-202ENST00000400555 MMEP08473 750 aa13.65□□□□□ -0.23
PPP4R1-202ENST00000400555 TNNI1P19237 187 aa13.65□□□□□ -0.23
PPP4R1-202ENST00000400555 HSPA9P38646 679 aaKnown RBP13.65□□□□□ -0.23
PPP4R1-202ENST00000400555 GKAP1Q5VSY0 366 aaPredicted RBP13.65□□□□□ -0.23
PPP4R1-202ENST00000400555 EPS8L3Q8TE67 593 aaKnown RBP13.65□□□□□ -0.23
PPP4R1-202ENST00000400555 TBC1D31Q96DN5 1066 aa13.65□□□□□ -0.23
PPP4R1-202ENST00000400555 PSMD1Q99460 953 aa13.65□□□□□ -0.23
PPP4R1-202ENST00000400555 INTS9Q9NV88 658 aaKnown RBP13.65□□□□□ -0.23
PPP4R1-202ENST00000400555 BAIAP2L1Q9UHR4 511 aa13.65□□□□□ -0.23
PPP4R1-202ENST00000400555 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.65□□□□□ -0.23
PPP4R1-202ENST00000400555 ABCA3Q99758 1704 aa13.64□□□□□ -0.23
PPP4R1-202ENST00000400555 TBX3O15119 743 aa13.64□□□□□ -0.23
PPP4R1-202ENST00000400555 PLCB3Q01970 1234 aa13.64□□□□□ -0.23
PPP4R1-202ENST00000400555 ITGB3BPQ13352 177 aaPredicted RBP13.64□□□□□ -0.23
PPP4R1-202ENST00000400555 PRAMEF18Q5VWM3 479 aa13.64□□□□□ -0.23
PPP4R1-202ENST00000400555 CYFIP1Q7L576 1253 aa13.64□□□□□ -0.23
PPP4R1-202ENST00000400555 XXYLT1Q8NBI6 393 aa13.64□□□□□ -0.23
PPP4R1-202ENST00000400555 POLR3CQ9BUI4 534 aaPredicted RBP13.64□□□□□ -0.23
PPP4R1-202ENST00000400555 TAOK3Q9H2K8 898 aa13.64□□□□□ -0.23
PPP4R1-202ENST00000400555 CD248Q9HCU0 757 aa13.64□□□□□ -0.23
PPP4R1-202ENST00000400555 HSPBP1Q9NZL4 362 aa13.64□□□□□ -0.23
PPP4R1-202ENST00000400555 TRPC5Q9UL62 973 aaPredicted RBP13.64□□□□□ -0.23
PPP4R1-202ENST00000400555 SUGT1Q9Y2Z0 365 aa13.64□□□□□ -0.23
PPP4R1-202ENST00000400555 CYP3A7-CYP3A51PA0A087WV96 503 aa13.64□□□□□ -0.23
PPP4R1-202ENST00000400555 SHOX2O60902 331 aaPredicted RBP13.64□□□□□ -0.23
PPP4R1-202ENST00000400555 CYP3A7P24462 503 aa13.64□□□□□ -0.23
PPP4R1-202ENST00000400555 LONRF1Q17RB8 773 aa13.64□□□□□ -0.23
PPP4R1-202ENST00000400555 MMS22LQ6ZRQ5 1243 aa13.64□□□□□ -0.23
PPP4R1-202ENST00000400555 ZNF668Q96K58 619 aaPredicted RBP13.64□□□□□ -0.23
PPP4R1-202ENST00000400555 ERP44Q9BS26 406 aa13.64□□□□□ -0.23
PPP4R1-202ENST00000400555 ANKRD62A6NC57 917 aa13.64□□□□□ -0.23
PPP4R1-202ENST00000400555 HNRNPDLO14979 420 aaKnown RBP13.64□□□□□ -0.23
PPP4R1-202ENST00000400555 GPC5P78333 572 aa13.64□□□□□ -0.23
PPP4R1-202ENST00000400555 UBAP2Q5T6F2 1119 aaKnown RBP13.64□□□□□ -0.23
PPP4R1-202ENST00000400555 CYP4F22Q6NT55 531 aa13.64□□□□□ -0.23
PPP4R1-202ENST00000400555 TMC3Q7Z5M5 1100 aa13.64□□□□□ -0.23
PPP4R1-202ENST00000400555 CPA5Q8WXQ8 436 aa13.64□□□□□ -0.23
PPP4R1-202ENST00000400555 PWWP2AQ96N64 755 aa13.64□□□□□ -0.23
PPP4R1-202ENST00000400555 FZD1Q9UP38 647 aa13.64□□□□□ -0.23
PPP4R1-202ENST00000400555 PHLPP1O60346 1717 aa13.63□□□□□ -0.23
PPP4R1-202ENST00000400555 CLTAP09496 248 aa13.63□□□□□ -0.23
PPP4R1-202ENST00000400555 CHN1P15882 459 aa13.63□□□□□ -0.23
PPP4R1-202ENST00000400555 TMEM132AQ24JP5 1023 aa13.63□□□□□ -0.23
PPP4R1-202ENST00000400555 TCP11Q8WWU5 503 aa13.63□□□□□ -0.23
PPP4R1-202ENST00000400555 ACCSQ96QU6 501 aa13.63□□□□□ -0.23
PPP4R1-202ENST00000400555 TCHPQ9BT92 498 aa13.63□□□□□ -0.23
PPP4R1-202ENST00000400555 SLC16A3O15427 465 aaKnown RBP13.63□□□□□ -0.23
PPP4R1-202ENST00000400555 PYGMP11217 842 aa13.63□□□□□ -0.23
PPP4R1-202ENST00000400555 ADCY8P40145 1251 aa13.63□□□□□ -0.23
PPP4R1-202ENST00000400555 MARSP56192 900 aaKnown RBP13.63□□□□□ -0.23
PPP4R1-202ENST00000400555 HOOK3Q86VS8 718 aa13.63□□□□□ -0.23
PPP4R1-202ENST00000400555 ZNF564Q8TBZ8 553 aaPredicted RBP13.63□□□□□ -0.23
PPP4R1-202ENST00000400555 HAUS1Q96CS2 278 aa13.63□□□□□ -0.23
PPP4R1-202ENST00000400555 ANAPC7Q9UJX3 599 aa13.63□□□□□ -0.23
PPP4R1-202ENST00000400555 ZHX2Q9Y6X8 837 aa13.63□□□□□ -0.23
PPP4R1-202ENST00000400555 TMEM253P0C7T8 217 aa13.63□□□□□ -0.23
PPP4R1-202ENST00000400555 SKOR1P84550 965 aa13.63□□□□□ -0.23
PPP4R1-202ENST00000400555 MTMR1Q13613 665 aa13.63□□□□□ -0.23
PPP4R1-202ENST00000400555 ZNF394Q53GI3 561 aa13.63□□□□□ -0.23
PPP4R1-202ENST00000400555 SGO2Q562F6 1265 aa13.63□□□□□ -0.23
PPP4R1-202ENST00000400555 EPM2AIP1Q7L775 607 aaPredicted RBP13.63□□□□□ -0.23
PPP4R1-202ENST00000400555 DPH6Q7L8W6 267 aa13.63□□□□□ -0.23
PPP4R1-202ENST00000400555 PRUNE1Q86TP1 453 aa13.63□□□□□ -0.23
PPP4R1-202ENST00000400555 SLITRK6Q9H5Y7 841 aa13.63□□□□□ -0.23
PPP4R1-202ENST00000400555 HAUS2Q9NVX0 235 aa13.63□□□□□ -0.23
PPP4R1-202ENST00000400555 PSMD10O75832 226 aa13.62□□□□□ -0.23
PPP4R1-202ENST00000400555 SEZ6Q53EL9 994 aa13.62□□□□□ -0.23
PPP4R1-202ENST00000400555 DCAF12L1Q5VU92 463 aa13.62□□□□□ -0.23
PPP4R1-202ENST00000400555 MKL1Q969V6 931 aa13.62□□□□□ -0.23
PPP4R1-202ENST00000400555 CEP170P1Q96L14 293 aa13.62□□□□□ -0.23
PPP4R1-202ENST00000400555 PRMT1Q99873 361 aaKnown RBP13.62□□□□□ -0.23
PPP4R1-202ENST00000400555 FAM213AQ9BRX8 229 aa13.62□□□□□ -0.23
PPP4R1-202ENST00000400555 TUFT1Q9NNX1 390 aa13.62□□□□□ -0.23
PPP4R1-202ENST00000400555 SMCHD1A6NHR9 2005 aa13.62□□□□□ -0.23
PPP4R1-202ENST00000400555 FRMD3A2A2Y4 597 aa13.62□□□□□ -0.23
PPP4R1-202ENST00000400555 DENND3A2RUS2 1198 aa13.62□□□□□ -0.23
PPP4R1-202ENST00000400555 FAM107AO95990 144 aa13.62□□□□□ -0.23
PPP4R1-202ENST00000400555 ITGB5P18084 799 aa13.62□□□□□ -0.23
PPP4R1-202ENST00000400555 SEPT14Q6ZU15 432 aa13.62□□□□□ -0.23
PPP4R1-202ENST00000400555 SEC16BQ96JE7 1060 aa13.62□□□□□ -0.23
PPP4R1-202ENST00000400555 TRIM7Q9C029 511 aa13.62□□□□□ -0.23
PPP4R1-202ENST00000400555 OLFML3Q9NRN5 406 aa13.62□□□□□ -0.23
PPP4R1-202ENST00000400555 DDX20Q9UHI6 824 aaKnown RBP13.62□□□□□ -0.23
PPP4R1-202ENST00000400555 IGLV3-22A0A075B6J6 115 aa13.62□□□□□ -0.23
PPP4R1-202ENST00000400555 MAPK4P31152 587 aa13.62□□□□□ -0.23
PPP4R1-202ENST00000400555 PRKCIP41743 596 aa13.62□□□□□ -0.23
PPP4R1-202ENST00000400555 PDE6CP51160 858 aa13.62□□□□□ -0.23
PPP4R1-202ENST00000400555 SMTNP53814 917 aa13.62□□□□□ -0.23
PPP4R1-202ENST00000400555 FAM182AQ5T1J6 154 aa13.62□□□□□ -0.23
PPP4R1-202ENST00000400555 ARHGEF16Q5VV41 709 aa13.62□□□□□ -0.23
PPP4R1-202ENST00000400555 ZNF572Q7Z3I7 529 aaPredicted RBP13.62□□□□□ -0.23
PPP4R1-202ENST00000400555 SAMD15Q9P1V8 674 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 92.4 ms