RNA–Protein interactions for RNA: ENST00000400214.2

HMGB3P7-201, Transcript of high mobility group box 3 pseudogene 7, humanhuman

BASIC

Gene HMGB3P7, Length 611 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P7-201ENST00000400214 CAPN5O15484 640 aaPredicted RBP6.07□□□□□ -1.44
HMGB3P7-201ENST00000400214 TMEM127O75204 238 aa6.07□□□□□ -1.44
HMGB3P7-201ENST00000400214 ULK1O75385 1050 aa6.07□□□□□ -1.44
HMGB3P7-201ENST00000400214 SURF6O75683 361 aaKnown RBP6.07□□□□□ -1.44
HMGB3P7-201ENST00000400214 RAC2P15153 192 aa6.07□□□□□ -1.44
HMGB3P7-201ENST00000400214 RAG1P15918 1043 aa6.07□□□□□ -1.44
HMGB3P7-201ENST00000400214 NME2P22392 152 aa6.07□□□□□ -1.44
HMGB3P7-201ENST00000400214 XPAP23025 273 aaPredicted RBP6.07□□□□□ -1.44
HMGB3P7-201ENST00000400214 PSMA3P25788 255 aa6.07□□□□□ -1.44
HMGB3P7-201ENST00000400214 ADORA1P30542 326 aa6.07□□□□□ -1.44
HMGB3P7-201ENST00000400214 PHKA1P46020 1223 aa6.07□□□□□ -1.44
HMGB3P7-201ENST00000400214 LSSP48449 732 aa6.07□□□□□ -1.44
HMGB3P7-201ENST00000400214 PRIM2P49643 509 aa6.07□□□□□ -1.44
HMGB3P7-201ENST00000400214 ZNF143P52747 638 aaPredicted RBP6.07□□□□□ -1.44
HMGB3P7-201ENST00000400214 FAPQ12884 760 aa6.07□□□□□ -1.44
HMGB3P7-201ENST00000400214 NBPF9Q3BBW0 867 aa6.07□□□□□ -1.44
HMGB3P7-201ENST00000400214 PRR16Q569H4 304 aa6.07□□□□□ -1.44
HMGB3P7-201ENST00000400214 RPS26P11Q5JNZ5 115 aaPredicted RBP6.07□□□□□ -1.44
HMGB3P7-201ENST00000400214 CST9Q5W186 159 aa6.07□□□□□ -1.44
HMGB3P7-201ENST00000400214 ABHD17CQ6PCB6 329 aa6.07□□□□□ -1.44
HMGB3P7-201ENST00000400214 HHIPL2Q6UWX4 724 aa6.07□□□□□ -1.44
HMGB3P7-201ENST00000400214 CCDC129Q6ZRS4 1044 aa6.07□□□□□ -1.44
HMGB3P7-201ENST00000400214 ERC1Q8IUD2 1116 aa6.07□□□□□ -1.44
HMGB3P7-201ENST00000400214 ARL10Q8N8L6 244 aa6.07□□□□□ -1.44
HMGB3P7-201ENST00000400214 APPL2Q8NEU8 664 aa6.07□□□□□ -1.44
HMGB3P7-201ENST00000400214 OR13H1Q8NG92 308 aa6.07□□□□□ -1.44
HMGB3P7-201ENST00000400214 DIS3LQ8TF46 1054 aaKnown RBP6.07□□□□□ -1.44
HMGB3P7-201ENST00000400214 IPCEF1Q8WWN9 437 aaPredicted RBP6.07□□□□□ -1.44
HMGB3P7-201ENST00000400214 DCPSQ96C86 337 aaKnown RBP6.07□□□□□ -1.44
HMGB3P7-201ENST00000400214 TBC1D31Q96DN5 1066 aa6.07□□□□□ -1.44
HMGB3P7-201ENST00000400214 HHIPL1Q96JK4 782 aa6.07□□□□□ -1.44
HMGB3P7-201ENST00000400214 TEKT5Q96M29 485 aa6.07□□□□□ -1.44
HMGB3P7-201ENST00000400214 GLIS2Q9BZE0 524 aaPredicted RBP6.07□□□□□ -1.44
HMGB3P7-201ENST00000400214 XPO4Q9C0E2 1151 aaKnown RBP6.07□□□□□ -1.44
HMGB3P7-201ENST00000400214 GGA3Q9NZ52 723 aa6.07□□□□□ -1.44
HMGB3P7-201ENST00000400214 SAMD15Q9P1V8 674 aa6.07□□□□□ -1.44
HMGB3P7-201ENST00000400214 CEP72Q9P209 647 aa6.07□□□□□ -1.44
HMGB3P7-201ENST00000400214 ABCF2Q9UG63 623 aa6.07□□□□□ -1.44
HMGB3P7-201ENST00000400214 DENND2AQ9ULE3 1009 aa6.07□□□□□ -1.44
HMGB3P7-201ENST00000400214 FPGT-TNNI3KV9GXZ4 949 aa6.07□□□□□ -1.44
HMGB3P7-201ENST00000400214 PAPPA2Q9BXP8 1791 aa6.07□□□□□ -1.44
HMGB3P7-201ENST00000400214 MAST3O60307 1309 aa6.06□□□□□ -1.44
HMGB3P7-201ENST00000400214 ASTN2O75129 1339 aaPredicted RBP6.06□□□□□ -1.44
HMGB3P7-201ENST00000400214 OTOFQ9HC10 1997 aa6.06□□□□□ -1.44
HMGB3P7-201ENST00000400214 ANKRD34BA5PLL1 514 aa6.06□□□□□ -1.44
HMGB3P7-201ENST00000400214 KLHL33A6NCF5 533 aa6.06□□□□□ -1.44
HMGB3P7-201ENST00000400214 CBX4O00257 560 aa6.06□□□□□ -1.44
HMGB3P7-201ENST00000400214 EIF3FO00303 357 aaPredicted RBP6.06□□□□□ -1.44
HMGB3P7-201ENST00000400214 TRAF5O00463 557 aa6.06□□□□□ -1.44
HMGB3P7-201ENST00000400214 H2AFYO75367 372 aaKnown RBP6.06□□□□□ -1.44
HMGB3P7-201ENST00000400214 FRAT2O75474 233 aaPredicted RBP6.06□□□□□ -1.44
HMGB3P7-201ENST00000400214 GLRX3O76003 335 aaKnown RBP6.06□□□□□ -1.44
HMGB3P7-201ENST00000400214 ALDH1A1P00352 501 aa6.06□□□□□ -1.44
HMGB3P7-201ENST00000400214 SELPP16109 830 aa6.06□□□□□ -1.44
HMGB3P7-201ENST00000400214 AKAP5P24588 427 aa6.06□□□□□ -1.44
HMGB3P7-201ENST00000400214 FXR1P51114 621 aaKnown RBP eCLIP6.06□□□□□ -1.44
HMGB3P7-201ENST00000400214 ZNF131P52739 623 aa6.06□□□□□ -1.44
HMGB3P7-201ENST00000400214 KRT83P78385 493 aa6.06□□□□□ -1.44
HMGB3P7-201ENST00000400214 TYRO3Q06418 890 aa6.06□□□□□ -1.44
HMGB3P7-201ENST00000400214 PPP2R5CQ13362 524 aa6.06□□□□□ -1.44
HMGB3P7-201ENST00000400214 LRRC32Q14392 662 aa6.06□□□□□ -1.44
HMGB3P7-201ENST00000400214 LRRC14Q15048 493 aa6.06□□□□□ -1.44
HMGB3P7-201ENST00000400214 DLGAP5Q15398 846 aa6.06□□□□□ -1.44
HMGB3P7-201ENST00000400214 GRIK5Q16478 980 aa6.06□□□□□ -1.44
HMGB3P7-201ENST00000400214 ANO4Q32M45 955 aa6.06□□□□□ -1.44
HMGB3P7-201ENST00000400214 C4orf17Q53FE4 359 aa6.06□□□□□ -1.44
HMGB3P7-201ENST00000400214 DGKKQ5KSL6 1271 aa6.06□□□□□ -1.44
HMGB3P7-201ENST00000400214 COL13A1Q5TAT6 717 aaPredicted RBP6.06□□□□□ -1.44
HMGB3P7-201ENST00000400214 ANGEL2Q5VTE6 544 aaKnown RBP6.06□□□□□ -1.44
HMGB3P7-201ENST00000400214 TMCO3Q6UWJ1 677 aa6.06□□□□□ -1.44
HMGB3P7-201ENST00000400214 KIF18BQ86Y91 864 aa6.06□□□□□ -1.44
HMGB3P7-201ENST00000400214 APOBEC3FQ8IUX4 373 aaKnown RBP6.06□□□□□ -1.44
HMGB3P7-201ENST00000400214 CMIPQ8IY22 773 aa6.06□□□□□ -1.44
HMGB3P7-201ENST00000400214 ZGPATQ8N5A5 531 aaKnown RBP6.06□□□□□ -1.44
HMGB3P7-201ENST00000400214 ZSCAN18Q8TBC5 510 aaPredicted RBP6.06□□□□□ -1.44
HMGB3P7-201ENST00000400214 CHTF18Q8WVB6 975 aa6.06□□□□□ -1.44
HMGB3P7-201ENST00000400214 PRMT6Q96LA8 375 aaPredicted RBP6.06□□□□□ -1.44
HMGB3P7-201ENST00000400214 ZDHHC15Q96MV8 337 aa6.06□□□□□ -1.44
HMGB3P7-201ENST00000400214 PPP1R16BQ96T49 567 aa6.06□□□□□ -1.44
HMGB3P7-201ENST00000400214 GTPBP4Q9BZE4 634 aaKnown RBP6.06□□□□□ -1.44
HMGB3P7-201ENST00000400214 CBX8Q9HC52 389 aa6.06□□□□□ -1.44
HMGB3P7-201ENST00000400214 THG1LQ9NWX6 298 aaKnown RBP6.06□□□□□ -1.44
HMGB3P7-201ENST00000400214 ZDHHC3Q9NYG2 299 aa6.06□□□□□ -1.44
HMGB3P7-201ENST00000400214 PPARGC1AQ9UBK2 798 aaKnown RBP6.06□□□□□ -1.44
HMGB3P7-201ENST00000400214 REV1Q9UBZ9 1251 aa6.06□□□□□ -1.44
HMGB3P7-201ENST00000400214 GIMAP2Q9UG22 337 aa6.06□□□□□ -1.44
HMGB3P7-201ENST00000400214 PPP1R9AQ9ULJ8 1098 aa6.06□□□□□ -1.44
HMGB3P7-201ENST00000400214 TLL2Q9Y6L7 1015 aa6.06□□□□□ -1.44
HMGB3P7-201ENST00000400214 CNTNAP1P78357 1384 aa6.06□□□□□ -1.44
HMGB3P7-201ENST00000400214 MYH1P12882 1939 aa6.05□□□□□ -1.44
HMGB3P7-201ENST00000400214 B4E171 279 aa6.05□□□□□ -1.44
HMGB3P7-201ENST00000400214 B4E1Z4 1266 aa6.05□□□□□ -1.44
HMGB3P7-201ENST00000400214 NCK2O43639 380 aa6.05□□□□□ -1.44
HMGB3P7-201ENST00000400214 DLX3O60479 287 aa6.05□□□□□ -1.44
HMGB3P7-201ENST00000400214 MAFKO60675 156 aa6.05□□□□□ -1.44
HMGB3P7-201ENST00000400214 MMP20O60882 483 aa6.05□□□□□ -1.44
HMGB3P7-201ENST00000400214 SASH3O75995 380 aa6.05□□□□□ -1.44
HMGB3P7-201ENST00000400214 SLITRK5O94991 958 aa6.05□□□□□ -1.44
HMGB3P7-201ENST00000400214 CRTAMO95727 393 aa6.05□□□□□ -1.44
HMGB3P7-201ENST00000400214 TBX18O95935 607 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms