RNA–Protein interactions for RNA: ENST00000374253.9

CNKSR1-202, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNKSR1, Length 2,538 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-202ENST00000374253 PHIPQ8WWQ0 1821 aa17.32■□□□□ 0.36
CNKSR1-202ENST00000374253 DLATP10515 647 aaKnown RBP17.32■□□□□ 0.36
CNKSR1-202ENST00000374253 LMAN1P49257 510 aa17.32■□□□□ 0.36
CNKSR1-202ENST00000374253 CARSP49589 748 aaKnown RBP17.32■□□□□ 0.36
CNKSR1-202ENST00000374253 ACTR2P61160 394 aa17.32■□□□□ 0.36
CNKSR1-202ENST00000374253 PRKCEQ02156 737 aa17.32■□□□□ 0.36
CNKSR1-202ENST00000374253 ITIH3Q06033 890 aa17.32■□□□□ 0.36
CNKSR1-202ENST00000374253 SLC39A4Q6P5W5 647 aa17.32■□□□□ 0.36
CNKSR1-202ENST00000374253 METTL13Q8N6R0 699 aa17.32■□□□□ 0.36
CNKSR1-202ENST00000374253 ACAD9Q9H845 621 aa17.32■□□□□ 0.36
CNKSR1-202ENST00000374253 SSC5DA1L4H1 1573 aa17.32■□□□□ 0.36
CNKSR1-202ENST00000374253 BUB1BO60566 1050 aaPredicted RBP17.31■□□□□ 0.36
CNKSR1-202ENST00000374253 SYF2O95926 243 aaKnown RBP17.31■□□□□ 0.36
CNKSR1-202ENST00000374253 SMTNP53814 917 aa17.31■□□□□ 0.36
CNKSR1-202ENST00000374253 LMBRD2Q68DH5 695 aaPredicted RBP17.31■□□□□ 0.36
CNKSR1-202ENST00000374253 SEPT14Q6ZU15 432 aa17.31■□□□□ 0.36
CNKSR1-202ENST00000374253 GPRASP2Q96D09 838 aa17.31■□□□□ 0.36
CNKSR1-202ENST00000374253 ANKEF1Q9NU02 776 aa17.31■□□□□ 0.36
CNKSR1-202ENST00000374253 SLC9A2Q9UBY0 812 aa17.31■□□□□ 0.36
CNKSR1-202ENST00000374253 NFU1Q9UMS0 254 aa17.31■□□□□ 0.36
CNKSR1-202ENST00000374253 ZC3H4Q9UPT8 1303 aaKnown RBP17.31■□□□□ 0.36
CNKSR1-202ENST00000374253 BTNL10A8MVZ5 291 aa17.31■□□□□ 0.36
CNKSR1-202ENST00000374253 MAPTP10636 758 aaKnown RBP17.31■□□□□ 0.36
CNKSR1-202ENST00000374253 LMNB1P20700 586 aa17.31■□□□□ 0.36
CNKSR1-202ENST00000374253 CYP2C19P33261 490 aa17.31■□□□□ 0.36
CNKSR1-202ENST00000374253 EPC2Q52LR7 807 aa17.31■□□□□ 0.36
CNKSR1-202ENST00000374253 ADAT2Q7Z6V5 191 aaKnown RBP17.31■□□□□ 0.36
CNKSR1-202ENST00000374253 USP38Q8NB14 1042 aa17.31■□□□□ 0.36
CNKSR1-202ENST00000374253 POMGNT1Q8WZA1 660 aa17.31■□□□□ 0.36
CNKSR1-202ENST00000374253 SYT11Q9BT88 431 aa17.31■□□□□ 0.36
CNKSR1-202ENST00000374253 R3HDMLQ9H3Y0 253 aa17.31■□□□□ 0.36
CNKSR1-202ENST00000374253 XPNPEP1Q9NQW7 623 aa17.31■□□□□ 0.36
CNKSR1-202ENST00000374253 ATMINO43313 823 aaPredicted RBP17.3■□□□□ 0.36
CNKSR1-202ENST00000374253 RAD51CO43502 376 aa17.3■□□□□ 0.36
CNKSR1-202ENST00000374253 STBD1O95210 358 aa17.3■□□□□ 0.36
CNKSR1-202ENST00000374253 SGPL1O95470 568 aa17.3■□□□□ 0.36
CNKSR1-202ENST00000374253 FAM153BP0C7A2 387 aa17.3■□□□□ 0.36
CNKSR1-202ENST00000374253 ALCAMQ13740 583 aa17.3■□□□□ 0.36
CNKSR1-202ENST00000374253 FAM153CQ494X1 144 aa17.3■□□□□ 0.36
CNKSR1-202ENST00000374253 NAA35Q5VZE5 725 aa17.3■□□□□ 0.36
CNKSR1-202ENST00000374253 EEPD1Q7L9B9 569 aa17.3■□□□□ 0.36
CNKSR1-202ENST00000374253 TSEN2Q8NCE0 465 aaKnown RBP17.3■□□□□ 0.36
CNKSR1-202ENST00000374253 CTNNBL1Q8WYA6 563 aaPredicted RBP17.3■□□□□ 0.36
CNKSR1-202ENST00000374253 BICD1Q96G01 975 aa17.3■□□□□ 0.36
CNKSR1-202ENST00000374253 FAM153AQ9UHL3 310 aa17.3■□□□□ 0.36
CNKSR1-202ENST00000374253 ADAMTS5Q9UNA0 930 aa17.3■□□□□ 0.36
CNKSR1-202ENST00000374253 AFG3L2Q9Y4W6 797 aa17.3■□□□□ 0.36
CNKSR1-202ENST00000374253 HNRNPDLO14979 420 aaKnown RBP17.3■□□□□ 0.36
CNKSR1-202ENST00000374253 RNF40O75150 1001 aa17.3■□□□□ 0.36
CNKSR1-202ENST00000374253 ITGA4P13612 1032 aa17.3■□□□□ 0.36
CNKSR1-202ENST00000374253 GUCY2FP51841 1108 aa17.3■□□□□ 0.36
CNKSR1-202ENST00000374253 CETN1Q12798 172 aa17.3■□□□□ 0.36
CNKSR1-202ENST00000374253 RPUSD2Q8IZ73 545 aaKnown RBP17.3■□□□□ 0.36
CNKSR1-202ENST00000374253 ANKRD35Q8N283 1001 aa17.3■□□□□ 0.36
CNKSR1-202ENST00000374253 TMEM143Q96AN5 459 aa17.3■□□□□ 0.36
CNKSR1-202ENST00000374253 AGPAT1Q99943 283 aa17.3■□□□□ 0.36
CNKSR1-202ENST00000374253 SGIP1Q9BQI5 828 aa17.3■□□□□ 0.36
CNKSR1-202ENST00000374253 PI4K2AQ9BTU6 479 aa17.3■□□□□ 0.36
CNKSR1-202ENST00000374253 COG5Q9UP83 839 aa17.3■□□□□ 0.36
CNKSR1-202ENST00000374253 CD2APQ9Y5K6 639 aa17.3■□□□□ 0.36
CNKSR1-202ENST00000374253 WDR81Q562E7 1941 aa17.3■□□□□ 0.36
CNKSR1-202ENST00000374253 C19orf81C9J6K1 198 aa17.29■□□□□ 0.36
CNKSR1-202ENST00000374253 AGPSO00116 658 aa17.29■□□□□ 0.36
CNKSR1-202ENST00000374253 CYP26A1O43174 497 aa17.29■□□□□ 0.36
CNKSR1-202ENST00000374253 PSAPP07602 524 aa17.29■□□□□ 0.36
CNKSR1-202ENST00000374253 FDX1P10109 184 aa17.29■□□□□ 0.36
CNKSR1-202ENST00000374253 VGLL4Q14135 290 aa17.29■□□□□ 0.36
CNKSR1-202ENST00000374253 IFI16Q16666 785 aaKnown RBP17.29■□□□□ 0.36
CNKSR1-202ENST00000374253 OTUD6AQ7L8S5 288 aa17.29■□□□□ 0.36
CNKSR1-202ENST00000374253 NT5DC3Q86UY8 548 aa17.29■□□□□ 0.36
CNKSR1-202ENST00000374253 DHX38Q92620 1227 aaKnown RBP17.29■□□□□ 0.36
CNKSR1-202ENST00000374253 ATP6V0A1Q93050 837 aa17.29■□□□□ 0.36
CNKSR1-202ENST00000374253 KREMEN1Q96MU8 473 aa17.29■□□□□ 0.36
CNKSR1-202ENST00000374253 DDX47Q9H0S4 455 aaKnown RBP17.29■□□□□ 0.36
CNKSR1-202ENST00000374253 TMEM110-MUSTN1A8MSY1 372 aa17.29■□□□□ 0.36
CNKSR1-202ENST00000374253 DDNO94850 711 aaPredicted RBP17.29■□□□□ 0.36
CNKSR1-202ENST00000374253 PRPF4BQ13523 1007 aaKnown RBP17.29■□□□□ 0.36
CNKSR1-202ENST00000374253 MYBPC2Q14324 1141 aa17.29■□□□□ 0.36
CNKSR1-202ENST00000374253 SLC47A2Q86VL8 602 aa17.29■□□□□ 0.36
CNKSR1-202ENST00000374253 MAP4K3Q8IVH8 894 aa17.29■□□□□ 0.36
CNKSR1-202ENST00000374253 TAS1R2Q8TE23 839 aa17.29■□□□□ 0.36
CNKSR1-202ENST00000374253 C12orf42Q96LP6 360 aa17.29■□□□□ 0.36
CNKSR1-202ENST00000374253 FAM213AQ9BRX8 229 aa17.29■□□□□ 0.36
CNKSR1-202ENST00000374253 POLR3FQ9H1D9 316 aaPredicted RBP17.29■□□□□ 0.36
CNKSR1-202ENST00000374253 FAM204AQ9H8W3 233 aa17.29■□□□□ 0.36
CNKSR1-202ENST00000374253 NOC2LQ9Y3T9 749 aaKnown RBP17.29■□□□□ 0.36
CNKSR1-202ENST00000374253 LTBP3Q9NS15 1303 aa17.29■□□□□ 0.36
CNKSR1-202ENST00000374253 ADM5C9JUS6 153 aa17.28■□□□□ 0.36
CNKSR1-202ENST00000374253 USP2O75604 605 aaPredicted RBP17.28■□□□□ 0.36
CNKSR1-202ENST00000374253 COPB2P35606 906 aa17.28■□□□□ 0.36
CNKSR1-202ENST00000374253 C12orf56Q8IXR9 622 aa17.28■□□□□ 0.36
CNKSR1-202ENST00000374253 ACBD3Q9H3P7 528 aa17.28■□□□□ 0.36
CNKSR1-202ENST00000374253 CYP26B1Q9NR63 512 aa17.28■□□□□ 0.36
CNKSR1-202ENST00000374253 FTLP02792 175 aaPredicted RBP17.28■□□□□ 0.36
CNKSR1-202ENST00000374253 ZNF211Q13398 564 aaPredicted RBP17.28■□□□□ 0.36
CNKSR1-202ENST00000374253 KIF22Q14807 665 aa17.28■□□□□ 0.36
CNKSR1-202ENST00000374253 TAS1R3Q7RTX0 852 aa17.28■□□□□ 0.36
CNKSR1-202ENST00000374253 NOP9Q86U38 636 aaKnown RBP17.28■□□□□ 0.36
CNKSR1-202ENST00000374253 DDX42Q86XP3 938 aaKnown RBP eCLIP17.28■□□□□ 0.36
CNKSR1-202ENST00000374253 SAMD3Q8N6K7 520 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms