RNA–Protein interactions for RNA: ENST00000368021.7

USF1-203, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-203ENST00000368021 MNX1P50219 401 aaPredicted RBP13.2□□□□□ -0.3
USF1-203ENST00000368021 ARMCX5Q6P1M9 558 aa13.2□□□□□ -0.3
USF1-203ENST00000368021 CEP120Q8N960 986 aa13.2□□□□□ -0.3
USF1-203ENST00000368021 TMEM143Q96AN5 459 aa13.2□□□□□ -0.3
USF1-203ENST00000368021 ARMCX3Q9UH62 379 aaPredicted RBP13.2□□□□□ -0.3
USF1-203ENST00000368021 ADGRA3Q8IWK6 1321 aa13.2□□□□□ -0.3
USF1-203ENST00000368021 COL1A2P08123 1366 aa13.2□□□□□ -0.3
USF1-203ENST00000368021 H3BRB1 525 aa13.19□□□□□ -0.3
USF1-203ENST00000368021 PES1O00541 588 aaKnown RBP13.19□□□□□ -0.3
USF1-203ENST00000368021 CLIC2O15247 247 aa13.19□□□□□ -0.3
USF1-203ENST00000368021 DYNC1LI2O43237 492 aaPredicted RBP13.19□□□□□ -0.3
USF1-203ENST00000368021 AKAP3O75969 853 aa13.19□□□□□ -0.3
USF1-203ENST00000368021 C6orf222P0C671 652 aaPredicted RBP13.19□□□□□ -0.3
USF1-203ENST00000368021 PSMC2P35998 433 aaKnown RBP13.19□□□□□ -0.3
USF1-203ENST00000368021 MXD4Q14582 209 aaPredicted RBP13.19□□□□□ -0.3
USF1-203ENST00000368021 PTPN21Q16825 1174 aa13.19□□□□□ -0.3
USF1-203ENST00000368021 BRDTQ58F21 947 aaPredicted RBP13.19□□□□□ -0.3
USF1-203ENST00000368021 IQCDQ96DY2 449 aa13.19□□□□□ -0.3
USF1-203ENST00000368021 RNPEPQ9H4A4 650 aa13.19□□□□□ -0.3
USF1-203ENST00000368021 TUT1Q9H6E5 874 aaKnown RBP13.19□□□□□ -0.3
USF1-203ENST00000368021 MYADML2A6NDP7 307 aa13.18□□□□□ -0.3
USF1-203ENST00000368021 TULP2O00295 520 aa13.18□□□□□ -0.3
USF1-203ENST00000368021 NRDCO43847 1150 aa13.18□□□□□ -0.3
USF1-203ENST00000368021 DUSP11O75319 330 aaKnown RBP13.18□□□□□ -0.3
USF1-203ENST00000368021 ARID5BQ14865 1188 aa13.18□□□□□ -0.3
USF1-203ENST00000368021 TLK2Q86UE8 772 aa13.18□□□□□ -0.3
USF1-203ENST00000368021 PPFIBP1Q86W92 1011 aa13.18□□□□□ -0.3
USF1-203ENST00000368021 RETREG2Q8NC44 543 aa13.18□□□□□ -0.3
USF1-203ENST00000368021 ARRDC4Q8NCT1 418 aa13.18□□□□□ -0.3
USF1-203ENST00000368021 CCDC112Q8NEF3 446 aa13.18□□□□□ -0.3
USF1-203ENST00000368021 ASAP3Q8TDY4 903 aa13.18□□□□□ -0.3
USF1-203ENST00000368021 PSPC1Q8WXF1 523 aaKnown RBP13.18□□□□□ -0.3
USF1-203ENST00000368021 BORCS6Q96GS4 357 aa13.18□□□□□ -0.3
USF1-203ENST00000368021 KIFC3Q9BVG8 833 aa13.18□□□□□ -0.3
USF1-203ENST00000368021 SENP6Q9GZR1 1112 aaPredicted RBP13.18□□□□□ -0.3
USF1-203ENST00000368021 FRMD4BQ9Y2L6 1034 aa13.18□□□□□ -0.3
USF1-203ENST00000368021 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.18□□□□□ -0.3
USF1-203ENST00000368021 MAPK13O15264 365 aa13.18□□□□□ -0.3
USF1-203ENST00000368021 MAGEB2O15479 319 aa13.18□□□□□ -0.3
USF1-203ENST00000368021 TPM1P09493 284 aa13.18□□□□□ -0.3
USF1-203ENST00000368021 ZNF286BP0CG31 522 aa13.18□□□□□ -0.3
USF1-203ENST00000368021 INSRRP14616 1297 aa13.18□□□□□ -0.3
USF1-203ENST00000368021 CASP4P49662 377 aa13.18□□□□□ -0.3
USF1-203ENST00000368021 CPT1AP50416 773 aa13.18□□□□□ -0.3
USF1-203ENST00000368021 BEX3Q00994 111 aa13.18□□□□□ -0.3
USF1-203ENST00000368021 LRMPQ12912 555 aa13.18□□□□□ -0.3
USF1-203ENST00000368021 FIGNQ5HY92 759 aa13.18□□□□□ -0.3
USF1-203ENST00000368021 GNASQ5JWF2 1037 aa13.18□□□□□ -0.3
USF1-203ENST00000368021 CEP135Q66GS9 1140 aa13.18□□□□□ -0.3
USF1-203ENST00000368021 NECAB2Q7Z6G3 386 aa13.18□□□□□ -0.3
USF1-203ENST00000368021 CNGA4Q8IV77 575 aa13.18□□□□□ -0.3
USF1-203ENST00000368021 TC2NQ8N9U0 490 aa13.18□□□□□ -0.3
USF1-203ENST00000368021 NUP58Q9BVL2 599 aa13.18□□□□□ -0.3
USF1-203ENST00000368021 IKZF4Q9H2S9 585 aa13.18□□□□□ -0.3
USF1-203ENST00000368021 TMEM134Q9H6X4 195 aa13.18□□□□□ -0.3
USF1-203ENST00000368021 SIP14410 1827 aa13.17□□□□□ -0.3
USF1-203ENST00000368021 PHLPP2Q6ZVD8 1323 aa13.17□□□□□ -0.3
USF1-203ENST00000368021 KBTBD13C9JR72 458 aa13.17□□□□□ -0.3
USF1-203ENST00000368021 AKR1B15C9JRZ8 316 aaPredicted RBP13.17□□□□□ -0.3
USF1-203ENST00000368021 ADAMTS4O75173 837 aa13.17□□□□□ -0.3
USF1-203ENST00000368021 C22orf31O95567 290 aa13.17□□□□□ -0.3
USF1-203ENST00000368021 F2P00734 622 aa13.17□□□□□ -0.3
USF1-203ENST00000368021 GYPCP04921 128 aa13.17□□□□□ -0.3
USF1-203ENST00000368021 EFNA5P52803 228 aa13.17□□□□□ -0.3
USF1-203ENST00000368021 ATN1P54259 1190 aaPredicted RBP13.17□□□□□ -0.3
USF1-203ENST00000368021 CBX1P83916 185 aa13.17□□□□□ -0.3
USF1-203ENST00000368021 CCZ1BP86790 482 aa13.17□□□□□ -0.3
USF1-203ENST00000368021 CCZ1P86791 482 aaPredicted RBP13.17□□□□□ -0.3
USF1-203ENST00000368021 MKRN4PQ13434 485 aaPredicted RBP13.17□□□□□ -0.3
USF1-203ENST00000368021 TAS1R3Q7RTX0 852 aa13.17□□□□□ -0.3
USF1-203ENST00000368021 UBE2Q1Q7Z7E8 422 aa13.17□□□□□ -0.3
USF1-203ENST00000368021 RNF180Q86T96 592 aa13.17□□□□□ -0.3
USF1-203ENST00000368021 FAM186BQ8IYM0 893 aa13.17□□□□□ -0.3
USF1-203ENST00000368021 ANKLE1Q8NAG6 615 aa13.17□□□□□ -0.3
USF1-203ENST00000368021 DEPTORQ8TB45 409 aa13.17□□□□□ -0.3
USF1-203ENST00000368021 PRPF31Q8WWY3 499 aaKnown RBP13.17□□□□□ -0.3
USF1-203ENST00000368021 TMX1Q9H3N1 280 aa13.17□□□□□ -0.3
USF1-203ENST00000368021 LAMA3Q16787 3333 aa13.17□□□□□ -0.3
USF1-203ENST00000368021 KAT6AQ92794 2004 aa13.17□□□□□ -0.3
USF1-203ENST00000368021 PDE4DIPQ5VU43 2346 aa13.16□□□□□ -0.3
USF1-203ENST00000368021 LRRIQ4A6NIV6 560 aa13.16□□□□□ -0.3
USF1-203ENST00000368021 DNM1LO00429 736 aa13.16□□□□□ -0.3
USF1-203ENST00000368021 ASAP2O43150 1006 aa13.16□□□□□ -0.3
USF1-203ENST00000368021 EXOC3O60645 756 aa13.16□□□□□ -0.3
USF1-203ENST00000368021 PIGRP01833 764 aa13.16□□□□□ -0.3
USF1-203ENST00000368021 CYP2J2P51589 502 aa13.16□□□□□ -0.3
USF1-203ENST00000368021 RBL2Q08999 1139 aa13.16□□□□□ -0.3
USF1-203ENST00000368021 STRN3Q13033 797 aa13.16□□□□□ -0.3
USF1-203ENST00000368021 DRP2Q13474 957 aa13.16□□□□□ -0.3
USF1-203ENST00000368021 CAPSQ13938 189 aa13.16□□□□□ -0.3
USF1-203ENST00000368021 KCNA10Q16322 511 aa13.16□□□□□ -0.3
USF1-203ENST00000368021 CDCA2Q69YH5 1023 aaPredicted RBP13.16□□□□□ -0.3
USF1-203ENST00000368021 XXYLT1Q8NBI6 393 aa13.16□□□□□ -0.3
USF1-203ENST00000368021 ANKRD7Q92527 254 aa13.16□□□□□ -0.3
USF1-203ENST00000368021 DPF3Q92784 378 aa13.16□□□□□ -0.3
USF1-203ENST00000368021 CCDC51Q96ER9 411 aa13.16□□□□□ -0.3
USF1-203ENST00000368021 PANX2Q96RD6 677 aa13.16□□□□□ -0.3
USF1-203ENST00000368021 TTYH3Q9C0H2 523 aa13.16□□□□□ -0.3
USF1-203ENST00000368021 AP5M1Q9H0R1 490 aa13.16□□□□□ -0.3
USF1-203ENST00000368021 C11orf49Q9H6J7 331 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms