RNA–Protein interactions for RNA: ENST00000361246.6

CDC42BPB-201, Transcript of CDC42 binding protein kinase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPB, Length 6,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-201ENST00000361246 CDR2LQ86X02 465 aaPredicted RBP21.61■■□□□ 1.05
CDC42BPB-201ENST00000361246 DHX38Q92620 1227 aaKnown RBP21.61■■□□□ 1.05
CDC42BPB-201ENST00000361246 ERCC6L2Q5T890 1561 aa21.61■■□□□ 1.05
CDC42BPB-201ENST00000361246 GSG1L2A8MUP6 293 aa21.61■■□□□ 1.05
CDC42BPB-201ENST00000361246 MGEA5O60502 916 aa21.61■■□□□ 1.05
CDC42BPB-201ENST00000361246 GUCY1A2P33402 732 aa21.61■■□□□ 1.05
CDC42BPB-201ENST00000361246 RWDD2BP57060 319 aa21.61■■□□□ 1.05
CDC42BPB-201ENST00000361246 BCL2L12Q9HB09 334 aa21.61■■□□□ 1.05
CDC42BPB-201ENST00000361246 ENTPD7Q9NQZ7 604 aa21.61■■□□□ 1.05
CDC42BPB-201ENST00000361246 CYBBP04839 570 aa21.61■■□□□ 1.05
CDC42BPB-201ENST00000361246 PCSK7Q16549 785 aa21.61■■□□□ 1.05
CDC42BPB-201ENST00000361246 ALKBH5Q6P6C2 394 aaKnown RBP21.61■■□□□ 1.05
CDC42BPB-201ENST00000361246 DEFB128Q7Z7B8 93 aa21.61■■□□□ 1.05
CDC42BPB-201ENST00000361246 CEP152O94986 1710 aa21.61■■□□□ 1.05
CDC42BPB-201ENST00000361246 CLASP1Q7Z460 1538 aa21.61■■□□□ 1.05
CDC42BPB-201ENST00000361246 F8W8V4 182 aa21.6■■□□□ 1.05
CDC42BPB-201ENST00000361246 THPOP40225 353 aa21.6■■□□□ 1.05
CDC42BPB-201ENST00000361246 ZNF235Q14590 738 aa21.6■■□□□ 1.05
CDC42BPB-201ENST00000361246 E2F8A0AVK6 867 aa21.6■■□□□ 1.05
CDC42BPB-201ENST00000361246 FAM47DPA6NHR8 397 aa21.6■■□□□ 1.05
CDC42BPB-201ENST00000361246 SDC4P31431 198 aa21.6■■□□□ 1.05
CDC42BPB-201ENST00000361246 SFNP31947 248 aa21.6■■□□□ 1.05
CDC42BPB-201ENST00000361246 TOB2Q14106 344 aaPredicted RBP21.6■■□□□ 1.05
CDC42BPB-201ENST00000361246 IL31Q6EBC2 164 aa21.6■■□□□ 1.05
CDC42BPB-201ENST00000361246 BCAS4Q8TDM0 211 aa21.6■■□□□ 1.05
CDC42BPB-201ENST00000361246 SREBF2Q12772 1141 aa21.6■■□□□ 1.05
CDC42BPB-201ENST00000361246 GPD1LQ8N335 351 aa21.6■■□□□ 1.05
CDC42BPB-201ENST00000361246 DEFB129Q9H1M3 183 aa21.6■■□□□ 1.05
CDC42BPB-201ENST00000361246 MLXIPLQ9NP71 852 aa21.6■■□□□ 1.05
CDC42BPB-201ENST00000361246 MAP3K21Q5TCX8 1036 aa21.6■■□□□ 1.05
CDC42BPB-201ENST00000361246 TMEM35BQ8NCS4 154 aa21.6■■□□□ 1.05
CDC42BPB-201ENST00000361246 EEF1B2P24534 225 aaKnown RBP21.6■■□□□ 1.05
CDC42BPB-201ENST00000361246 LIFRP42702 1097 aa21.6■■□□□ 1.05
CDC42BPB-201ENST00000361246 ST8SIA6P61647 398 aa21.6■■□□□ 1.05
CDC42BPB-201ENST00000361246 RFWD2Q8NHY2 731 aa21.6■■□□□ 1.05
CDC42BPB-201ENST00000361246 EPB41L3Q9Y2J2 1087 aaPredicted RBP21.6■■□□□ 1.05
CDC42BPB-201ENST00000361246 EMSYQ7Z589 1322 aa21.6■■□□□ 1.05
CDC42BPB-201ENST00000361246 FLT1P17948 1338 aa21.6■■□□□ 1.05
CDC42BPB-201ENST00000361246 TAF1BQ53T94 588 aaPredicted RBP21.6■■□□□ 1.05
CDC42BPB-201ENST00000361246 SRPK1Q96SB4 655 aaKnown RBP21.6■■□□□ 1.05
CDC42BPB-201ENST00000361246 INTS2Q9H0H0 1204 aaKnown RBP21.6■■□□□ 1.05
CDC42BPB-201ENST00000361246 OSBPL5Q9H0X9 879 aaPredicted RBP21.6■■□□□ 1.05
CDC42BPB-201ENST00000361246 BARHL2Q9NY43 387 aa21.6■■□□□ 1.05
CDC42BPB-201ENST00000361246 SCINQ9Y6U3 715 aa21.6■■□□□ 1.05
CDC42BPB-201ENST00000361246 PREX2Q70Z35 1606 aa21.59■■□□□ 1.05
CDC42BPB-201ENST00000361246 PTK2BQ14289 1009 aa21.59■■□□□ 1.05
CDC42BPB-201ENST00000361246 APPL2Q8NEU8 664 aa21.59■■□□□ 1.05
CDC42BPB-201ENST00000361246 ADAM33Q9BZ11 813 aa21.59■■□□□ 1.05
CDC42BPB-201ENST00000361246 SLC13A1Q9BZW2 595 aa21.59■■□□□ 1.05
CDC42BPB-201ENST00000361246 ETFBP38117 255 aa21.59■■□□□ 1.05
CDC42BPB-201ENST00000361246 ARHGAP25P42331 645 aa21.59■■□□□ 1.05
CDC42BPB-201ENST00000361246 CENPUQ71F23 418 aa21.59■■□□□ 1.05
CDC42BPB-201ENST00000361246 AGBL1Q96MI9 1066 aa21.59■■□□□ 1.05
CDC42BPB-201ENST00000361246 CAPN10Q9HC96 672 aa21.59■■□□□ 1.05
CDC42BPB-201ENST00000361246 PCDHA10Q9Y5I2 948 aa21.59■■□□□ 1.05
CDC42BPB-201ENST00000361246 PAPOLAP51003 745 aaKnown RBP21.59■■□□□ 1.05
CDC42BPB-201ENST00000361246 LRRC63Q05C16 580 aa21.59■■□□□ 1.05
CDC42BPB-201ENST00000361246 KNOP1Q1ED39 458 aaKnown RBP21.59■■□□□ 1.05
CDC42BPB-201ENST00000361246 EFHC2Q5JST6 749 aa21.59■■□□□ 1.05
CDC42BPB-201ENST00000361246 SPZ1Q9BXG8 430 aa21.59■■□□□ 1.05
CDC42BPB-201ENST00000361246 NBPF26B4DH59 902 aa21.59■■□□□ 1.05
CDC42BPB-201ENST00000361246 NBPF10Q6P3W6 841 aaKnown RBP21.59■■□□□ 1.05
CDC42BPB-201ENST00000361246 NBPF15Q8N660 670 aa21.59■■□□□ 1.05
CDC42BPB-201ENST00000361246 HASPINQ8TF76 798 aa21.59■■□□□ 1.05
CDC42BPB-201ENST00000361246 PPP2R3CQ969Q6 453 aa21.59■■□□□ 1.05
CDC42BPB-201ENST00000361246 MTIF3Q9H2K0 278 aaKnown RBP21.59■■□□□ 1.05
CDC42BPB-201ENST00000361246 ATP11BQ9Y2G3 1177 aa21.59■■□□□ 1.05
CDC42BPB-201ENST00000361246 USH1CQ9Y6N9 552 aa21.59■■□□□ 1.05
CDC42BPB-201ENST00000361246 GH1P01241 217 aa21.59■■□□□ 1.05
CDC42BPB-201ENST00000361246 PRAMEP78395 509 aa21.59■■□□□ 1.05
CDC42BPB-201ENST00000361246 EPS15L1Q9UBC2 864 aa21.59■■□□□ 1.05
CDC42BPB-201ENST00000361246 FAM95CA0A1B0GW59 222 aa21.58■■□□□ 1.05
CDC42BPB-201ENST00000361246 VPS72Q15906 364 aa21.58■■□□□ 1.05
CDC42BPB-201ENST00000361246 RESP18Q5W5W9 173 aa21.58■■□□□ 1.05
CDC42BPB-201ENST00000361246 BZW1Q7L1Q6 419 aaKnown RBP21.58■■□□□ 1.05
CDC42BPB-201ENST00000361246 C11orf96Q7Z7L8 435 aa21.58■■□□□ 1.05
CDC42BPB-201ENST00000361246 GPRC5AQ8NFJ5 357 aa21.58■■□□□ 1.05
CDC42BPB-201ENST00000361246 SLC30A5Q8TAD4 765 aa21.58■■□□□ 1.05
CDC42BPB-201ENST00000361246 NUDT12Q9BQG2 462 aa21.58■■□□□ 1.05
CDC42BPB-201ENST00000361246 SH3BP1Q9Y3L3 701 aa21.58■■□□□ 1.05
CDC42BPB-201ENST00000361246 PRDM15P57071 1507 aaPredicted RBP21.58■■□□□ 1.05
CDC42BPB-201ENST00000361246 EFCAB12Q6NXP0 572 aa21.58■■□□□ 1.05
CDC42BPB-201ENST00000361246 CCNYL1Q8N7R7 359 aa21.58■■□□□ 1.05
CDC42BPB-201ENST00000361246 GBP5Q96PP8 586 aa21.58■■□□□ 1.05
CDC42BPB-201ENST00000361246 NDUFA10O95299 355 aa21.58■■□□□ 1.05
CDC42BPB-201ENST00000361246 TAC1P20366 129 aa21.58■■□□□ 1.05
CDC42BPB-201ENST00000361246 ARHGDIAP52565 204 aa21.58■■□□□ 1.05
CDC42BPB-201ENST00000361246 STRIP1Q5VSL9 837 aa21.58■■□□□ 1.05
CDC42BPB-201ENST00000361246 NR1H4Q96RI1 486 aaPredicted RBP21.58■■□□□ 1.05
CDC42BPB-201ENST00000361246 NOVA2Q9UNW9 492 aaKnown RBP21.58■■□□□ 1.05
CDC42BPB-201ENST00000361246 JRKLQ9Y4A0 524 aa21.58■■□□□ 1.05
CDC42BPB-201ENST00000361246 NCK2O43639 380 aa21.58■■□□□ 1.04
CDC42BPB-201ENST00000361246 ITGA4P13612 1032 aa21.58■■□□□ 1.04
CDC42BPB-201ENST00000361246 FCGRTP55899 365 aa21.58■■□□□ 1.04
CDC42BPB-201ENST00000361246 IFT88Q13099 833 aa21.58■■□□□ 1.04
CDC42BPB-201ENST00000361246 PIP4K2CQ8TBX8 421 aa21.58■■□□□ 1.04
CDC42BPB-201ENST00000361246 LZICQ8WZA0 190 aa21.58■■□□□ 1.04
CDC42BPB-201ENST00000361246 HERC5Q9UII4 1024 aaKnown RBP21.58■■□□□ 1.04
CDC42BPB-201ENST00000361246 LIG3P49916 1009 aa21.58■■□□□ 1.04
CDC42BPB-201ENST00000361246 KPNA2P52292 529 aaKnown RBP21.58■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms