RNA–Protein interactions for RNA: ENST00000340958.3

CLDN4-201, Transcript of claudin 4, humanhuman

APPRIS P1 BASIC

Gene CLDN4, Length 1,831 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-201ENST00000340958 SYCP1Q15431 976 aa18.95■□□□□ 0.62
CLDN4-201ENST00000340958 MTHFD1LQ6UB35 978 aa18.95■□□□□ 0.62
CLDN4-201ENST00000340958 SLC9A9Q8IVB4 645 aa18.95■□□□□ 0.62
CLDN4-201ENST00000340958 TRIM59Q8IWR1 403 aa18.95■□□□□ 0.62
CLDN4-201ENST00000340958 XXYLT1Q8NBI6 393 aa18.95■□□□□ 0.62
CLDN4-201ENST00000340958 CBWD1Q9BRT8 395 aa18.95■□□□□ 0.62
CLDN4-201ENST00000340958 MKNK1Q9BUB5 465 aa18.95■□□□□ 0.62
CLDN4-201ENST00000340958 TMEM106CQ9BVX2 250 aa18.95■□□□□ 0.62
CLDN4-201ENST00000340958 RNF208Q9H0X6 261 aa18.95■□□□□ 0.62
CLDN4-201ENST00000340958 HSPBP1Q9NZL4 362 aa18.95■□□□□ 0.62
CLDN4-201ENST00000340958 ASAP2O43150 1006 aa18.95■□□□□ 0.62
CLDN4-201ENST00000340958 SEPT4O43236 478 aa18.95■□□□□ 0.62
CLDN4-201ENST00000340958 ZEB2O60315 1214 aa18.95■□□□□ 0.62
CLDN4-201ENST00000340958 PRKAR2AP13861 404 aaKnown RBP18.95■□□□□ 0.62
CLDN4-201ENST00000340958 TRIM21P19474 475 aaKnown RBP18.95■□□□□ 0.62
CLDN4-201ENST00000340958 EFNA5P52803 228 aa18.95■□□□□ 0.62
CLDN4-201ENST00000340958 ADKP55263 362 aaKnown RBP18.95■□□□□ 0.62
CLDN4-201ENST00000340958 IRX5P78411 483 aaPredicted RBP18.95■□□□□ 0.62
CLDN4-201ENST00000340958 RBL2Q08999 1139 aa18.95■□□□□ 0.62
CLDN4-201ENST00000340958 MKRN4PQ13434 485 aaPredicted RBP18.95■□□□□ 0.62
CLDN4-201ENST00000340958 GNASQ5JWF2 1037 aa18.95■□□□□ 0.62
CLDN4-201ENST00000340958 MAP3K21Q5TCX8 1036 aa18.95■□□□□ 0.62
CLDN4-201ENST00000340958 SCLT1Q96NL6 688 aa18.95■□□□□ 0.62
CLDN4-201ENST00000340958 MAP7D2Q96T17 732 aa18.95■□□□□ 0.62
CLDN4-201ENST00000340958 C2orf40Q9H1Z8 148 aa18.95■□□□□ 0.62
CLDN4-201ENST00000340958 SETD4Q9NVD3 440 aa18.95■□□□□ 0.62
CLDN4-201ENST00000340958 DMAC2Q9NW81 257 aa18.95■□□□□ 0.62
CLDN4-201ENST00000340958 ESPNB1AK53 854 aa18.94■□□□□ 0.62
CLDN4-201ENST00000340958 F2P00734 622 aa18.94■□□□□ 0.62
CLDN4-201ENST00000340958 PSEN2P49810 448 aa18.94■□□□□ 0.62
CLDN4-201ENST00000340958 KCNH2Q12809 1159 aa18.94■□□□□ 0.62
CLDN4-201ENST00000340958 TBX2Q13207 712 aaPredicted RBP18.94■□□□□ 0.62
CLDN4-201ENST00000340958 TMEM132AQ24JP5 1023 aa18.94■□□□□ 0.62
CLDN4-201ENST00000340958 C12orf56Q8IXR9 622 aa18.94■□□□□ 0.62
CLDN4-201ENST00000340958 ZNF668Q96K58 619 aaPredicted RBP18.94■□□□□ 0.62
CLDN4-201ENST00000340958 KCNF1Q9H3M0 494 aa18.94■□□□□ 0.62
CLDN4-201ENST00000340958 TMEM134Q9H6X4 195 aa18.94■□□□□ 0.62
CLDN4-201ENST00000340958 PHLPP2Q6ZVD8 1323 aa18.94■□□□□ 0.62
CLDN4-201ENST00000340958 ANKRD63C9JTQ0 380 aa18.93■□□□□ 0.62
CLDN4-201ENST00000340958 AFPP02771 609 aaKnown RBP18.93■□□□□ 0.62
CLDN4-201ENST00000340958 SMIM10L2AP0DMW4 78 aa18.93■□□□□ 0.62
CLDN4-201ENST00000340958 SMIM10L2BP0DMW5 78 aa18.93■□□□□ 0.62
CLDN4-201ENST00000340958 CLCN1P35523 988 aa18.93■□□□□ 0.62
CLDN4-201ENST00000340958 GOLGA8FQ08AF8 430 aa18.93■□□□□ 0.62
CLDN4-201ENST00000340958 GOLGA8DPQ0D2H9 430 aa18.93■□□□□ 0.62
CLDN4-201ENST00000340958 NUP58Q9BVL2 599 aa18.93■□□□□ 0.62
CLDN4-201ENST00000340958 MMRN2Q9H8L6 949 aa18.93■□□□□ 0.62
CLDN4-201ENST00000340958 NRCAMQ92823 1304 aa18.93■□□□□ 0.62
CLDN4-201ENST00000340958 INO80B-WBP1J3KQ70 363 aa18.93■□□□□ 0.62
CLDN4-201ENST00000340958 KPNA6O60684 536 aa18.93■□□□□ 0.62
CLDN4-201ENST00000340958 PGK1P00558 417 aa18.93■□□□□ 0.62
CLDN4-201ENST00000340958 GJB1P08034 283 aa18.93■□□□□ 0.62
CLDN4-201ENST00000340958 SKILP12757 684 aa18.93■□□□□ 0.62
CLDN4-201ENST00000340958 CASP14P31944 242 aa18.93■□□□□ 0.62
CLDN4-201ENST00000340958 MAPK6Q16659 721 aa18.93■□□□□ 0.62
CLDN4-201ENST00000340958 NFRKBQ6P4R8 1299 aa18.93■□□□□ 0.62
CLDN4-201ENST00000340958 CNGA4Q8IV77 575 aa18.93■□□□□ 0.62
CLDN4-201ENST00000340958 SAAL1Q96ER3 474 aa18.93■□□□□ 0.62
CLDN4-201ENST00000340958 PPP1R16BQ96T49 567 aa18.93■□□□□ 0.62
CLDN4-201ENST00000340958 INO80BQ9C086 356 aaPredicted RBP18.93■□□□□ 0.62
CLDN4-201ENST00000340958 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.93■□□□□ 0.62
CLDN4-201ENST00000340958 XPNPEP3Q9NQH7 507 aa18.93■□□□□ 0.62
CLDN4-201ENST00000340958 PAK6Q9NQU5 681 aaPredicted RBP18.93■□□□□ 0.62
CLDN4-201ENST00000340958 FRMPD3Q5JV73 1810 aa18.92■□□□□ 0.62
CLDN4-201ENST00000340958 GOLGA8IPA6NC78 632 aa18.92■□□□□ 0.62
CLDN4-201ENST00000340958 GOLGA8JA6NMD2 632 aa18.92■□□□□ 0.62
CLDN4-201ENST00000340958 EN2P19622 333 aaPredicted RBP18.92■□□□□ 0.62
CLDN4-201ENST00000340958 CCND3P30281 292 aaPredicted RBP18.92■□□□□ 0.62
CLDN4-201ENST00000340958 GJA9P57773 515 aa18.92■□□□□ 0.62
CLDN4-201ENST00000340958 TSR1Q2NL82 804 aaKnown RBP18.92■□□□□ 0.62
CLDN4-201ENST00000340958 SLFN12LQ6IEE8 588 aa18.92■□□□□ 0.62
CLDN4-201ENST00000340958 INTS8Q75QN2 995 aaKnown RBP18.92■□□□□ 0.62
CLDN4-201ENST00000340958 TAS1R3Q7RTX0 852 aa18.92■□□□□ 0.62
CLDN4-201ENST00000340958 C7orf31Q8N865 590 aa18.92■□□□□ 0.62
CLDN4-201ENST00000340958 NLRP7Q8WX94 980 aa18.92■□□□□ 0.62
CLDN4-201ENST00000340958 KAT2BQ92831 832 aa18.92■□□□□ 0.62
CLDN4-201ENST00000340958 ERGIC2Q96RQ1 377 aa18.92■□□□□ 0.62
CLDN4-201ENST00000340958 ANKFY1Q9P2R3 1169 aa18.92■□□□□ 0.62
CLDN4-201ENST00000340958 GARTP22102 1010 aa18.91■□□□□ 0.62
CLDN4-201ENST00000340958 PHKA2P46019 1235 aa18.91■□□□□ 0.62
CLDN4-201ENST00000340958 KLK7P49862 253 aa18.91■□□□□ 0.62
CLDN4-201ENST00000340958 CCDC155Q8N6L0 562 aa18.91■□□□□ 0.62
CLDN4-201ENST00000340958 CCDC112Q8NEF3 446 aa18.91■□□□□ 0.62
CLDN4-201ENST00000340958 PPP1R13LQ8WUF5 828 aa18.91■□□□□ 0.62
CLDN4-201ENST00000340958 LMBR1Q8WVP7 490 aa18.91■□□□□ 0.62
CLDN4-201ENST00000340958 TCHPQ9BT92 498 aa18.91■□□□□ 0.62
CLDN4-201ENST00000340958 TARS2Q9BW92 718 aaKnown RBP18.91■□□□□ 0.62
CLDN4-201ENST00000340958 MRPL4Q9BYD3 311 aaKnown RBP18.91■□□□□ 0.62
CLDN4-201ENST00000340958 HMX1Q9NP08 348 aaPredicted RBP18.91■□□□□ 0.62
CLDN4-201ENST00000340958 USP20Q9Y2K6 914 aa18.91■□□□□ 0.62
CLDN4-201ENST00000340958 MYADML2A6NDP7 307 aa18.9■□□□□ 0.62
CLDN4-201ENST00000340958 VTNP04004 478 aa18.9■□□□□ 0.62
CLDN4-201ENST00000340958 GYPCP04921 128 aa18.9■□□□□ 0.62
CLDN4-201ENST00000340958 PRKCBP05771 671 aa18.9■□□□□ 0.62
CLDN4-201ENST00000340958 ADSSP30520 456 aa18.9■□□□□ 0.62
CLDN4-201ENST00000340958 PURAQ00577 322 aaKnown RBP18.9■□□□□ 0.62
CLDN4-201ENST00000340958 CDCA2Q69YH5 1023 aaPredicted RBP18.9■□□□□ 0.62
CLDN4-201ENST00000340958 ZNF397Q8NF99 534 aaPredicted RBP18.9■□□□□ 0.62
CLDN4-201ENST00000340958 NEK11Q8NG66 645 aa18.9■□□□□ 0.62
CLDN4-201ENST00000340958 TMEM174Q8WUU8 243 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms