RNA–Protein interactions for RNA: ENST00000335725.8

TDP1-201, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 3,702 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-201ENST00000335725 PDAP1Q13442 181 aaKnown RBP9.18□□□□□ -0.94
TDP1-201ENST00000335725 PDE1CQ14123 709 aaPredicted RBP9.18□□□□□ -0.94
TDP1-201ENST00000335725 GRM2Q14416 872 aa9.18□□□□□ -0.94
TDP1-201ENST00000335725 CDONQ4KMG0 1287 aa9.18□□□□□ -0.94
TDP1-201ENST00000335725 CAND1Q86VP6 1230 aaKnown RBP9.18□□□□□ -0.94
TDP1-201ENST00000335725 LZTR1Q8N653 840 aa9.18□□□□□ -0.94
TDP1-201ENST00000335725 PURBQ96QR8 312 aaKnown RBP9.18□□□□□ -0.94
TDP1-201ENST00000335725 CCSER2Q9H7U1 834 aa9.18□□□□□ -0.94
TDP1-201ENST00000335725 EHMT1Q9H9B1 1298 aa9.18□□□□□ -0.94
TDP1-201ENST00000335725 NLRC4Q9NPP4 1024 aa9.18□□□□□ -0.94
TDP1-201ENST00000335725 DDX56Q9NY93 547 aaKnown RBP9.18□□□□□ -0.94
TDP1-201ENST00000335725 PCDHA5Q9Y5H7 936 aa9.18□□□□□ -0.94
TDP1-201ENST00000335725 RBM8AQ9Y5S9 174 aaKnown RBP9.18□□□□□ -0.94
TDP1-201ENST00000335725 MAP3K19Q56UN5 1328 aa9.18□□□□□ -0.94
TDP1-201ENST00000335725 MYH7P12883 1935 aa9.18□□□□□ -0.94
TDP1-201ENST00000335725 SEC24DO94855 1032 aaPredicted RBP9.18□□□□□ -0.94
TDP1-201ENST00000335725 ABCB1P08183 1280 aaPredicted RBP9.18□□□□□ -0.94
TDP1-201ENST00000335725 NUP107P57740 925 aa9.18□□□□□ -0.94
TDP1-201ENST00000335725 TOB2Q14106 344 aaPredicted RBP9.18□□□□□ -0.94
TDP1-201ENST00000335725 VWA3BQ502W6 1294 aa9.18□□□□□ -0.94
TDP1-201ENST00000335725 ZNF746Q6NUN9 644 aaPredicted RBP9.18□□□□□ -0.94
TDP1-201ENST00000335725 BRSK2Q8IWQ3 736 aa9.18□□□□□ -0.94
TDP1-201ENST00000335725 LILRB2Q8N423 598 aa9.18□□□□□ -0.94
TDP1-201ENST00000335725 OR2W6PQ8NHA6 318 aa9.18□□□□□ -0.94
TDP1-201ENST00000335725 ASIC4Q96FT7 647 aa9.18□□□□□ -0.94
TDP1-201ENST00000335725 BIRC8Q96P09 236 aa9.18□□□□□ -0.94
TDP1-201ENST00000335725 MEIS3Q99687 375 aa9.18□□□□□ -0.94
TDP1-201ENST00000335725 RBM12Q9NTZ6 932 aaKnown RBP9.18□□□□□ -0.94
TDP1-201ENST00000335725 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.18□□□□□ -0.94
TDP1-201ENST00000335725 ZFYVE9O95405 1425 aa9.18□□□□□ -0.94
TDP1-201ENST00000335725 ZC3H13Q5T200 1668 aaKnown RBP9.17□□□□□ -0.94
TDP1-201ENST00000335725 GIMAP1-GIMAP5A0A087WTJ2 511 aa9.17□□□□□ -0.94
TDP1-201ENST00000335725 SOBPA7XYQ1 873 aa9.17□□□□□ -0.94
TDP1-201ENST00000335725 TRAFD1O14545 582 aaPredicted RBP9.17□□□□□ -0.94
TDP1-201ENST00000335725 VILLO15195 856 aa9.17□□□□□ -0.94
TDP1-201ENST00000335725 PSMG1O95456 288 aa9.17□□□□□ -0.94
TDP1-201ENST00000335725 ASPHQ12797 758 aa9.17□□□□□ -0.94
TDP1-201ENST00000335725 SF3A3Q12874 501 aaKnown RBP eCLIP9.17□□□□□ -0.94
TDP1-201ENST00000335725 C16orf72Q14CZ0 275 aa9.17□□□□□ -0.94
TDP1-201ENST00000335725 PSMD6Q15008 389 aa9.17□□□□□ -0.94
TDP1-201ENST00000335725 TMEM266Q2M3C6 531 aa9.17□□□□□ -0.94
TDP1-201ENST00000335725 SPDYAQ5MJ70 313 aa9.17□□□□□ -0.94
TDP1-201ENST00000335725 DENND2CQ68D51 928 aa9.17□□□□□ -0.94
TDP1-201ENST00000335725 BORAQ6PGQ7 559 aa9.17□□□□□ -0.94
TDP1-201ENST00000335725 DTHD1Q6ZMT9 781 aa9.17□□□□□ -0.94
TDP1-201ENST00000335725 ERI1Q8IV48 349 aaKnown RBP9.17□□□□□ -0.94
TDP1-201ENST00000335725 ADSSL1Q8N142 457 aa9.17□□□□□ -0.94
TDP1-201ENST00000335725 ANGPTL6Q8NI99 470 aa9.17□□□□□ -0.94
TDP1-201ENST00000335725 ERP27Q96DN0 273 aa9.17□□□□□ -0.94
TDP1-201ENST00000335725 GIMAP5Q96F15 307 aa9.17□□□□□ -0.94
TDP1-201ENST00000335725 PGM2Q96G03 612 aa9.17□□□□□ -0.94
TDP1-201ENST00000335725 UROC1Q96N76 676 aa9.17□□□□□ -0.94
TDP1-201ENST00000335725 ECSITQ9BQ95 431 aa9.17□□□□□ -0.94
TDP1-201ENST00000335725 CNNM2Q9H8M5 875 aa9.17□□□□□ -0.94
TDP1-201ENST00000335725 TRNAU1APQ9NX07 287 aaKnown RBP9.17□□□□□ -0.94
TDP1-201ENST00000335725 STXBP5LQ9Y2K9 1186 aa9.17□□□□□ -0.94
TDP1-201ENST00000335725 NSD3Q9BZ95 1437 aa9.17□□□□□ -0.94
TDP1-201ENST00000335725 A0A0B4J203 849 aa9.17□□□□□ -0.94
TDP1-201ENST00000335725 ADCY6O43306 1168 aa9.17□□□□□ -0.94
TDP1-201ENST00000335725 RPS3AP61247 264 aaKnown RBP9.17□□□□□ -0.94
TDP1-201ENST00000335725 HERVK_113P62684 666 aa9.17□□□□□ -0.94
TDP1-201ENST00000335725 PPARDQ03181 441 aa9.17□□□□□ -0.94
TDP1-201ENST00000335725 SPA17Q15506 151 aa9.17□□□□□ -0.94
TDP1-201ENST00000335725 FIP1L1Q6UN15 594 aaKnown RBP9.17□□□□□ -0.94
TDP1-201ENST00000335725 C4orf50Q6ZRC1 276 aa9.17□□□□□ -0.94
TDP1-201ENST00000335725 TMC7Q7Z402 723 aa9.17□□□□□ -0.94
TDP1-201ENST00000335725 DDI1Q8WTU0 396 aa9.17□□□□□ -0.94
TDP1-201ENST00000335725 ARHGEF2Q92974 986 aaKnown RBP9.17□□□□□ -0.94
TDP1-201ENST00000335725 EGLN2Q96KS0 407 aa9.17□□□□□ -0.94
TDP1-201ENST00000335725 OLFM1Q99784 485 aa9.17□□□□□ -0.94
TDP1-201ENST00000335725 COQ7Q99807 217 aa9.17□□□□□ -0.94
TDP1-201ENST00000335725 MRPL9Q9BYD2 267 aaKnown RBP9.17□□□□□ -0.94
TDP1-201ENST00000335725 OSBPL6Q9BZF3 934 aa9.17□□□□□ -0.94
TDP1-201ENST00000335725 SCINQ9Y6U3 715 aa9.17□□□□□ -0.94
TDP1-201ENST00000335725 DCTN3O75935 186 aa9.17□□□□□ -0.94
TDP1-201ENST00000335725 AGTP01019 485 aa9.17□□□□□ -0.94
TDP1-201ENST00000335725 GLULP15104 373 aa9.17□□□□□ -0.94
TDP1-201ENST00000335725 PRKACAP17612 351 aa9.17□□□□□ -0.94
TDP1-201ENST00000335725 KRT2P35908 639 aa9.17□□□□□ -0.94
TDP1-201ENST00000335725 HNRNPFP52597 415 aaKnown RBP9.17□□□□□ -0.94
TDP1-201ENST00000335725 MAP3K7CLP57077 242 aa9.17□□□□□ -0.94
TDP1-201ENST00000335725 GRIN1Q05586 938 aa9.17□□□□□ -0.94
TDP1-201ENST00000335725 PPARAQ07869 468 aa9.17□□□□□ -0.94
TDP1-201ENST00000335725 PDE4DQ08499 809 aa9.17□□□□□ -0.94
TDP1-201ENST00000335725 DHRS4L2Q6PKH6 230 aa9.17□□□□□ -0.94
TDP1-201ENST00000335725 ELMOD1Q8N336 334 aa9.17□□□□□ -0.94
TDP1-201ENST00000335725 NKX2-3Q8TAU0 364 aa9.17□□□□□ -0.94
TDP1-201ENST00000335725 BORCS5Q969J3 196 aa9.17□□□□□ -0.94
TDP1-201ENST00000335725 SGF29Q96ES7 293 aa9.17□□□□□ -0.94
TDP1-201ENST00000335725 PRICKLE1Q96MT3 831 aaPredicted RBP9.17□□□□□ -0.94
TDP1-201ENST00000335725 DHRS9Q9BPW9 319 aa9.17□□□□□ -0.94
TDP1-201ENST00000335725 TUBB6Q9BUF5 446 aa9.17□□□□□ -0.94
TDP1-201ENST00000335725 SERHL2Q9H4I8 314 aa9.17□□□□□ -0.94
TDP1-201ENST00000335725 C8orf4Q9NR00 106 aa9.17□□□□□ -0.94
TDP1-201ENST00000335725 PLK2Q9NYY3 685 aa9.17□□□□□ -0.94
TDP1-201ENST00000335725 ZRANB1Q9UGI0 708 aa9.17□□□□□ -0.94
TDP1-201ENST00000335725 HMGXB4Q9UGU5 601 aa9.17□□□□□ -0.94
TDP1-201ENST00000335725 AK5Q9Y6K8 562 aa9.17□□□□□ -0.94
TDP1-201ENST00000335725 ASXL2Q76L83 1435 aa9.17□□□□□ -0.94
TDP1-201ENST00000335725 MYH15Q9Y2K3 1946 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 126.9 ms