RNA–Protein interactions for RNA: ENST00000329231.8

ATPAF1-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-201ENST00000329231 PRMT7Q9NVM4 692 aaPredicted RBP30.56■■■□□ 2.48
ATPAF1-201ENST00000329231 LZTS1Q9Y250 596 aa30.56■■■□□ 2.48
ATPAF1-201ENST00000329231 INPP5FQ9Y2H2 1132 aa30.56■■■□□ 2.48
ATPAF1-201ENST00000329231 CARNS1A5YM72 827 aa30.55■■■□□ 2.48
ATPAF1-201ENST00000329231 KCNQ1P51787 676 aa30.55■■■□□ 2.48
ATPAF1-201ENST00000329231 HYIQ5T013 277 aa30.55■■■□□ 2.48
ATPAF1-201ENST00000329231 PPP4R3CPQ6ZMV5 832 aa30.55■■■□□ 2.48
ATPAF1-201ENST00000329231 AGMOQ6ZNB7 445 aa30.55■■■□□ 2.48
ATPAF1-201ENST00000329231 DEPTORQ8TB45 409 aa30.55■■■□□ 2.48
ATPAF1-201ENST00000329231 URGCPQ8TCY9 931 aa30.55■■■□□ 2.48
ATPAF1-201ENST00000329231 PABPC5Q96DU9 382 aaKnown RBP30.55■■■□□ 2.48
ATPAF1-201ENST00000329231 CDK5RAP3Q96JB5 506 aa30.55■■■□□ 2.48
ATPAF1-201ENST00000329231 RSAD1Q9HA92 442 aa30.55■■■□□ 2.48
ATPAF1-201ENST00000329231 UBN1Q9NPG3 1134 aa30.55■■■□□ 2.48
ATPAF1-201ENST00000329231 TLR9Q9NR96 1032 aa30.55■■■□□ 2.48
ATPAF1-201ENST00000329231 SPG21Q9NZD8 308 aa30.55■■■□□ 2.48
ATPAF1-201ENST00000329231 PUF60Q9UHX1 559 aaKnown RBP30.55■■■□□ 2.48
ATPAF1-201ENST00000329231 MYO7AQ13402 2215 aa30.54■■■□□ 2.48
ATPAF1-201ENST00000329231 BMP1P13497 986 aa30.54■■■□□ 2.48
ATPAF1-201ENST00000329231 ALDH7A1P49419 539 aaKnown RBP30.54■■■□□ 2.48
ATPAF1-201ENST00000329231 KRT17Q04695 432 aa30.54■■■□□ 2.48
ATPAF1-201ENST00000329231 COL19A1Q14993 1142 aa30.54■■■□□ 2.48
ATPAF1-201ENST00000329231 SF3A1Q15459 793 aaKnown RBP30.54■■■□□ 2.48
ATPAF1-201ENST00000329231 FAM187BQ17R55 369 aa30.54■■■□□ 2.48
ATPAF1-201ENST00000329231 MICAL1Q8TDZ2 1067 aa30.54■■■□□ 2.48
ATPAF1-201ENST00000329231 EIF2AQ9BY44 585 aaKnown RBP30.54■■■□□ 2.48
ATPAF1-201ENST00000329231 TRIM6Q9C030 488 aaPredicted RBP30.54■■■□□ 2.48
ATPAF1-201ENST00000329231 TBC1D13Q9NVG8 400 aa30.54■■■□□ 2.48
ATPAF1-201ENST00000329231 IPPQ9Y573 584 aa30.54■■■□□ 2.48
ATPAF1-201ENST00000329231 B4GALT5O43286 388 aa30.53■■■□□ 2.48
ATPAF1-201ENST00000329231 SLC26A4O43511 780 aa30.53■■■□□ 2.48
ATPAF1-201ENST00000329231 ITGA4P13612 1032 aa30.53■■■□□ 2.48
ATPAF1-201ENST00000329231 KCNA5P22460 613 aa30.53■■■□□ 2.48
ATPAF1-201ENST00000329231 IRS1P35568 1242 aa30.53■■■□□ 2.48
ATPAF1-201ENST00000329231 PBX3P40426 434 aa30.53■■■□□ 2.48
ATPAF1-201ENST00000329231 RNASELQ05823 741 aaKnown RBP30.53■■■□□ 2.48
ATPAF1-201ENST00000329231 PDE12Q6L8Q7 609 aaKnown RBP30.53■■■□□ 2.48
ATPAF1-201ENST00000329231 HSCBQ8IWL3 235 aa30.53■■■□□ 2.48
ATPAF1-201ENST00000329231 HACE1Q8IYU2 909 aa30.53■■■□□ 2.48
ATPAF1-201ENST00000329231 SMG8Q8ND04 991 aaKnown RBP30.53■■■□□ 2.48
ATPAF1-201ENST00000329231 MRPS27Q92552 414 aaKnown RBP30.53■■■□□ 2.48
ATPAF1-201ENST00000329231 FZD8Q9H461 694 aa30.53■■■□□ 2.48
ATPAF1-201ENST00000329231 KANSL3Q9P2N6 904 aa30.53■■■□□ 2.48
ATPAF1-201ENST00000329231 A0A1B0GUA9 196 aa30.52■■■□□ 2.48
ATPAF1-201ENST00000329231 BCAR1P56945 870 aa30.52■■■□□ 2.48
ATPAF1-201ENST00000329231 HYAL1Q12794 435 aa30.52■■■□□ 2.48
ATPAF1-201ENST00000329231 MAPK6Q16659 721 aa30.52■■■□□ 2.48
ATPAF1-201ENST00000329231 SLC27A1Q6PCB7 646 aa30.52■■■□□ 2.48
ATPAF1-201ENST00000329231 EP400NLQ6ZTU2 488 aa30.52■■■□□ 2.48
ATPAF1-201ENST00000329231 KCNK18Q7Z418 384 aa30.52■■■□□ 2.48
ATPAF1-201ENST00000329231 ADAMTS19Q8TE59 1207 aa30.52■■■□□ 2.48
ATPAF1-201ENST00000329231 PNMA5Q96PV4 448 aa30.52■■■□□ 2.48
ATPAF1-201ENST00000329231 CLDND1Q9NY35 253 aa30.52■■■□□ 2.48
ATPAF1-201ENST00000329231 ZC3H11AO75152 810 aaKnown RBP eCLIP30.51■■■□□ 2.47
ATPAF1-201ENST00000329231 EFNA5P52803 228 aa30.51■■■□□ 2.47
ATPAF1-201ENST00000329231 RESTQ13127 1097 aa30.51■■■□□ 2.47
ATPAF1-201ENST00000329231 LEXMQ3ZCV2 418 aa30.51■■■□□ 2.47
ATPAF1-201ENST00000329231 RINT1Q6NUQ1 792 aa30.51■■■□□ 2.47
ATPAF1-201ENST00000329231 CABP7Q86V35 215 aa30.51■■■□□ 2.47
ATPAF1-201ENST00000329231 SLC39A11Q8N1S5 342 aa30.51■■■□□ 2.47
ATPAF1-201ENST00000329231 POLD4Q9HCU8 107 aa30.51■■■□□ 2.47
ATPAF1-201ENST00000329231 BRWD1Q9NSI6 2320 aa30.5■■■□□ 2.47
ATPAF1-201ENST00000329231 LONP1P36776 959 aaKnown RBP30.5■■■□□ 2.47
ATPAF1-201ENST00000329231 UBA7P41226 1012 aa30.5■■■□□ 2.47
ATPAF1-201ENST00000329231 C1orf186Q6ZWK4 172 aa30.5■■■□□ 2.47
ATPAF1-201ENST00000329231 DRC1Q96MC2 740 aa30.5■■■□□ 2.47
ATPAF1-201ENST00000329231 PLIN2Q99541 437 aa30.5■■■□□ 2.47
ATPAF1-201ENST00000329231 RUSC1Q9BVN2 902 aa30.5■■■□□ 2.47
ATPAF1-201ENST00000329231 TIPINQ9BVW5 301 aa30.5■■■□□ 2.47
ATPAF1-201ENST00000329231 IGFLR1Q9H665 355 aa30.5■■■□□ 2.47
ATPAF1-201ENST00000329231 NRDE2Q9H7Z3 1164 aa30.5■■■□□ 2.47
ATPAF1-201ENST00000329231 MTMR6Q9Y217 621 aa30.5■■■□□ 2.47
ATPAF1-201ENST00000329231 PLXNA4Q9HCM2 1894 aa30.49■■■□□ 2.47
ATPAF1-201ENST00000329231 STX6O43752 255 aa30.49■■■□□ 2.47
ATPAF1-201ENST00000329231 PRKCBP05771 671 aa30.49■■■□□ 2.47
ATPAF1-201ENST00000329231 PRPF4BQ13523 1007 aaKnown RBP30.49■■■□□ 2.47
ATPAF1-201ENST00000329231 TMEM132AQ24JP5 1023 aa30.49■■■□□ 2.47
ATPAF1-201ENST00000329231 CTC1Q2NKJ3 1217 aa30.49■■■□□ 2.47
ATPAF1-201ENST00000329231 TMEM119Q4V9L6 283 aa30.49■■■□□ 2.47
ATPAF1-201ENST00000329231 CALML4Q96GE6 196 aa30.49■■■□□ 2.47
ATPAF1-201ENST00000329231 CCDC113Q9H0I3 377 aa30.49■■■□□ 2.47
ATPAF1-201ENST00000329231 VCANP13611 3396 aa30.48■■■□□ 2.47
ATPAF1-201ENST00000329231 ATG2AQ2TAZ0 1938 aa30.48■■■□□ 2.47
ATPAF1-201ENST00000329231 ACKR2O00590 384 aa30.48■■■□□ 2.47
ATPAF1-201ENST00000329231 HIP1RO75146 1068 aa30.48■■■□□ 2.47
ATPAF1-201ENST00000329231 NPTXRO95502 500 aa30.48■■■□□ 2.47
ATPAF1-201ENST00000329231 SSBP05455 408 aaKnown RBP eCLIP30.48■■■□□ 2.47
ATPAF1-201ENST00000329231 ERVFC1P60507 584 aa30.48■■■□□ 2.47
ATPAF1-201ENST00000329231 ADGRD2Q7Z7M1 963 aa30.48■■■□□ 2.47
ATPAF1-201ENST00000329231 CDR2LQ86X02 465 aaPredicted RBP30.48■■■□□ 2.47
ATPAF1-201ENST00000329231 SYT2Q8N9I0 419 aaPredicted RBP30.48■■■□□ 2.47
ATPAF1-201ENST00000329231 TMEM169Q96HH4 297 aa30.48■■■□□ 2.47
ATPAF1-201ENST00000329231 FAM193BQ96PV7 902 aaPredicted RBP30.48■■■□□ 2.47
ATPAF1-201ENST00000329231 KIFC3Q9BVG8 833 aa30.48■■■□□ 2.47
ATPAF1-201ENST00000329231 GBP3Q9H0R5 595 aa30.48■■■□□ 2.47
ATPAF1-201ENST00000329231 RNF39Q9H2S5 420 aa30.48■■■□□ 2.47
ATPAF1-201ENST00000329231 ZSCAN16Q9H4T2 348 aaPredicted RBP30.48■■■□□ 2.47
ATPAF1-201ENST00000329231 GIT1Q9Y2X7 761 aa30.48■■■□□ 2.47
ATPAF1-201ENST00000329231 HES2Q9Y543 173 aa30.48■■■□□ 2.47
ATPAF1-201ENST00000329231 CLIC4Q9Y696 253 aa30.48■■■□□ 2.47
Retrieved 100 of 20,778 RNA–protein pairs in 121.3 ms