RNA–Protein interactions for RNA: ENST00000320580.8

PACS1-201, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PACS1, Length 4,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-201ENST00000320580 MTBPQ96DY7 904 aa17.73■□□□□ 0.43
PACS1-201ENST00000320580 POTEMA6NI47 508 aa17.73■□□□□ 0.43
PACS1-201ENST00000320580 GSG1L2A8MUP6 293 aa17.73■□□□□ 0.43
PACS1-201ENST00000320580 NDC80O14777 642 aa17.73■□□□□ 0.43
PACS1-201ENST00000320580 NPTXRO95502 500 aa17.73■□□□□ 0.43
PACS1-201ENST00000320580 PTPN4P29074 926 aa17.73■□□□□ 0.43
PACS1-201ENST00000320580 KRT17Q04695 432 aa17.73■□□□□ 0.43
PACS1-201ENST00000320580 NR1H3Q13133 447 aa17.73■□□□□ 0.43
PACS1-201ENST00000320580 SPRED3Q2MJR0 410 aa17.73■□□□□ 0.43
PACS1-201ENST00000320580 C1orf131Q8NDD1 294 aaKnown RBP17.73■□□□□ 0.43
PACS1-201ENST00000320580 DUSP9Q99956 384 aaKnown RBP17.73■□□□□ 0.43
PACS1-201ENST00000320580 SEC23IPQ9Y6Y8 1000 aaKnown RBP17.73■□□□□ 0.43
PACS1-201ENST00000320580 PJA2O43164 708 aa17.73■□□□□ 0.43
PACS1-201ENST00000320580 TTLL1O95922 423 aa17.73■□□□□ 0.43
PACS1-201ENST00000320580 RARAP10276 462 aa17.73■□□□□ 0.43
PACS1-201ENST00000320580 SLC34A1Q06495 639 aa17.73■□□□□ 0.43
PACS1-201ENST00000320580 OVGP1Q12889 678 aa17.73■□□□□ 0.43
PACS1-201ENST00000320580 CNGA2Q16280 664 aa17.73■□□□□ 0.43
PACS1-201ENST00000320580 KRT80Q6KB66 452 aa17.73■□□□□ 0.43
PACS1-201ENST00000320580 BTNL9Q6UXG8 535 aa17.73■□□□□ 0.43
PACS1-201ENST00000320580 ANO5Q75V66 913 aa17.73■□□□□ 0.43
PACS1-201ENST00000320580 CNKSR2Q8WXI2 1034 aa17.73■□□□□ 0.43
PACS1-201ENST00000320580 TBC1D10AQ9BXI6 508 aa17.73■□□□□ 0.43
PACS1-201ENST00000320580 SAP30BPQ9UHR5 308 aaKnown RBP17.73■□□□□ 0.43
PACS1-201ENST00000320580 ASAP1Q9ULH1 1129 aa17.73■□□□□ 0.43
PACS1-201ENST00000320580 DYNLL1P63167 89 aaKnown RBP17.72■□□□□ 0.43
PACS1-201ENST00000320580 C18orf8Q96DM3 657 aa17.72■□□□□ 0.43
PACS1-201ENST00000320580 MAGEB18Q96M61 343 aa17.72■□□□□ 0.43
PACS1-201ENST00000320580 LRGUKQ96M69 825 aa17.72■□□□□ 0.43
PACS1-201ENST00000320580 MTRQ99707 1265 aa17.72■□□□□ 0.43
PACS1-201ENST00000320580 EPHB6O15197 1021 aa17.72■□□□□ 0.43
PACS1-201ENST00000320580 TRIP10Q15642 601 aa17.72■□□□□ 0.43
PACS1-201ENST00000320580 SERPINB12Q96P63 405 aa17.72■□□□□ 0.43
PACS1-201ENST00000320580 HEMGNQ9BXL5 484 aa17.72■□□□□ 0.43
PACS1-201ENST00000320580 CYP4F11Q9HBI6 524 aa17.72■□□□□ 0.43
PACS1-201ENST00000320580 ITSN1Q15811 1721 aa17.72■□□□□ 0.43
PACS1-201ENST00000320580 ALX1Q15699 326 aa17.72■□□□□ 0.43
PACS1-201ENST00000320580 LGSNQ5TDP6 509 aa17.72■□□□□ 0.43
PACS1-201ENST00000320580 C16orf87Q6PH81 154 aa17.72■□□□□ 0.43
PACS1-201ENST00000320580 MTDHQ86UE4 582 aaKnown RBP17.72■□□□□ 0.43
PACS1-201ENST00000320580 FAM186BQ8IYM0 893 aa17.72■□□□□ 0.43
PACS1-201ENST00000320580 PPM1KQ8N3J5 372 aa17.72■□□□□ 0.43
PACS1-201ENST00000320580 CCDC89Q8N998 374 aa17.72■□□□□ 0.43
PACS1-201ENST00000320580 SREK1Q8WXA9 508 aaKnown RBP17.72■□□□□ 0.43
PACS1-201ENST00000320580 NSL1Q96IY1 281 aa17.72■□□□□ 0.43
PACS1-201ENST00000320580 CATSPER2Q96P56 530 aa17.72■□□□□ 0.43
PACS1-201ENST00000320580 IWS1Q96ST2 819 aa17.72■□□□□ 0.43
PACS1-201ENST00000320580 NAGPAQ9UK23 515 aa17.72■□□□□ 0.43
PACS1-201ENST00000320580 DNAJC12Q9UKB3 198 aa17.72■□□□□ 0.43
PACS1-201ENST00000320580 KDM3AQ9Y4C1 1321 aa17.72■□□□□ 0.43
PACS1-201ENST00000320580 INHBAP08476 426 aa17.72■□□□□ 0.43
PACS1-201ENST00000320580 KITP10721 976 aa17.72■□□□□ 0.43
PACS1-201ENST00000320580 SLC9A1P19634 815 aa17.72■□□□□ 0.43
PACS1-201ENST00000320580 PABPC4Q13310 644 aaKnown RBP eCLIP17.72■□□□□ 0.437e-13■■■■□ 19.4
PACS1-201ENST00000320580 TLDC1Q6P9B6 456 aa17.72■□□□□ 0.43
PACS1-201ENST00000320580 ANKFY1Q9P2R3 1169 aa17.72■□□□□ 0.43
PACS1-201ENST00000320580 USP21Q9UK80 565 aa17.72■□□□□ 0.43
PACS1-201ENST00000320580 SNAP23O00161 211 aa17.71■□□□□ 0.43
PACS1-201ENST00000320580 ABLIM1O14639 778 aa17.71■□□□□ 0.43
PACS1-201ENST00000320580 NMT2O60551 498 aa17.71■□□□□ 0.43
PACS1-201ENST00000320580 RCAN1P53805 252 aa17.71■□□□□ 0.43
PACS1-201ENST00000320580 FOXO4P98177 505 aa17.71■□□□□ 0.43
PACS1-201ENST00000320580 LRRC43Q8N309 656 aa17.71■□□□□ 0.43
PACS1-201ENST00000320580 WDR60Q8WVS4 1066 aa17.71■□□□□ 0.43
PACS1-201ENST00000320580 INPP4AQ96PE3 977 aaPredicted RBP17.71■□□□□ 0.43
PACS1-201ENST00000320580 FAM217BQ9NTX9 383 aaPredicted RBP17.71■□□□□ 0.43
PACS1-201ENST00000320580 BCAP29Q9UHQ4 241 aa17.71■□□□□ 0.43
PACS1-201ENST00000320580 TTC7AQ9ULT0 858 aaPredicted RBP17.71■□□□□ 0.43
PACS1-201ENST00000320580 NRXN3Q9Y4C0 1643 aa17.71■□□□□ 0.43
PACS1-201ENST00000320580 C5orf60A6NFR6 353 aa17.71■□□□□ 0.43
PACS1-201ENST00000320580 FAM196BA6NMK8 535 aa17.71■□□□□ 0.43
PACS1-201ENST00000320580 H3BRJ5 948 aa17.71■□□□□ 0.43
PACS1-201ENST00000320580 GOLGA8RI6L899 631 aa17.71■□□□□ 0.43
PACS1-201ENST00000320580 TPD52L2O43399 206 aaKnown RBP17.71■□□□□ 0.43
PACS1-201ENST00000320580 PDE8AO60658 829 aa17.71■□□□□ 0.43
PACS1-201ENST00000320580 PCCAP05165 728 aaPredicted RBP17.71■□□□□ 0.43
PACS1-201ENST00000320580 LINGO3P0C6S8 592 aa17.71■□□□□ 0.43
PACS1-201ENST00000320580 PYGBP11216 843 aa17.71■□□□□ 0.43
PACS1-201ENST00000320580 RARGP13631 454 aa17.71■□□□□ 0.43
PACS1-201ENST00000320580 EIF6P56537 245 aaKnown RBP17.71■□□□□ 0.43
PACS1-201ENST00000320580 COASYQ13057 564 aa17.71■□□□□ 0.43
PACS1-201ENST00000320580 SRBD1Q8N5C6 995 aaKnown RBP17.71■□□□□ 0.43
PACS1-201ENST00000320580 TRAIPQ9BWF2 469 aa17.71■□□□□ 0.43
PACS1-201ENST00000320580 ANKRD2Q9GZV1 360 aa17.71■□□□□ 0.43
PACS1-201ENST00000320580 PSMD7P51665 324 aa17.71■□□□□ 0.43
PACS1-201ENST00000320580 ADARP55265 1226 aaKnown RBP17.71■□□□□ 0.43
PACS1-201ENST00000320580 ASPHQ12797 758 aa17.71■□□□□ 0.43
PACS1-201ENST00000320580 P3H1Q32P28 736 aa17.71■□□□□ 0.43
PACS1-201ENST00000320580 KLC3Q6P597 504 aa17.71■□□□□ 0.43
PACS1-201ENST00000320580 IRF2BP1Q8IU81 584 aa17.71■□□□□ 0.43
PACS1-201ENST00000320580 EIF1ADQ8N9N8 165 aaKnown RBP17.71■□□□□ 0.43
PACS1-201ENST00000320580 UCHL3P15374 230 aa17.7■□□□□ 0.42
PACS1-201ENST00000320580 FECHP22830 423 aa17.7■□□□□ 0.42
PACS1-201ENST00000320580 MAPK4P31152 587 aa17.7■□□□□ 0.42
PACS1-201ENST00000320580 STAT4Q14765 748 aa17.7■□□□□ 0.42
PACS1-201ENST00000320580 ZNF746Q6NUN9 644 aaPredicted RBP17.7■□□□□ 0.42
PACS1-201ENST00000320580 GFM2Q969S9 779 aaKnown RBP17.7■□□□□ 0.42
PACS1-201ENST00000320580 TRIM56Q9BRZ2 755 aaKnown RBP17.7■□□□□ 0.42
PACS1-201ENST00000320580 XAB2Q9HCS7 855 aaKnown RBP17.7■□□□□ 0.42
PACS1-201ENST00000320580 NMRK1Q9NWW6 199 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms